Misgurnus anguillicaudatus (oriental weatherfish): 129417261
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Entry
129417261 CDS
T09481
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04620
Toll-like receptor signaling pathway
manu04621
NOD-like receptor signaling pathway
manu04622
RIG-I-like receptor signaling pathway
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129417261 (traf3)
04621 NOD-like receptor signaling pathway
129417261 (traf3)
04622 RIG-I-like receptor signaling pathway
129417261 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129417261 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Crescentin
zf-C3HC4
ATG16
zf-C3HC4_2
Sina_ZnF
zf-RING_UBOX
CENP-K
zf-C3HC4_4
DUF1664
EzrA
AAA_13
Exonuc_VII_L
Med4
FapA
ATG17_like
UPF0242
DUF4363
FlaC_arch
Fez1
COG2
Laminin_II
DUF4349
DASH_Dad3
USP8_interact
zf-TRAF_2
FliJ
YlbD_coat
Baculo_PEP_C
IFT57
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
129417261
NCBI-ProteinID:
XP_055027782
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All DBs
Position
15:33008344..33022319
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AA seq
599 aa
AA seq
DB search
MSGSIREILQRNGVGSSDDTVEQLIHVMSAGRNVEQQIALQQRPPSLGMPSMAPRSRHEP
GFQPIHGGFRDRFVTTPEPKYCCESCRLVLCNPRQTECGHRFCESCIAELLSKSTPVCPA
DREPLFEDKIFRDVCCNREIMALKVYCRSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLG
KCKEKMMRKDMPEHLSRKCKHREITCEFCNHKMALTELQKHKETVCPAFPVACPNHCSFA
SILRSELSSHQNDCPKAQVTCSFIRYGCSYKGLNQEMREHESNFASEHLRMMAVRNTTLE
AKVEDVKSELMERYKVLPSLSSRLAEVETQYEEIREKLRQLEQKIASMQKLMSTHSEKLL
EVEMELRELRPLRALREEVDALRGSVESMRSIISSLDSGRVGSSSGPALGSFEQRLTRHD
DMLSVHDIRLAEMDLKLQVLETASFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGY
FGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDPLLPWPFKQKVTLMLMDQGPARKHLS
DAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLENGTYIKDDTIYIKVNVDTSDLPDP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctccattcgtgaaattcttcagagaaacggggttggatcatcggacgacacc
gttgaacaactgattcatgtcatgtccgcagggcgtaatgtggaacagcagattgcactg
cagcagcgtcctccatctctcggaatgccctccatggccccgcggtccaggcacgagccg
ggattccagcccatacacggtggcttcagggatcgctttgtcacgacacccgagcccaaa
tactgctgcgagtcctgcaggctagtgctgtgcaaccctcggcaaactgagtgcggacat
cgcttctgcgagagctgcattgcggagctgctcagtaagtctaccccagtgtgtccagct
gatcgagaaccactctttgaagataagatattccgggatgtttgctgcaatagggaaatt
atggctttaaaggtctactgccgaagtgagaaaaatggatgtaaagaacagatgagttta
cagcaggtcatggatcacttggaagtttgtccttacttcgaggtgccatgtccattggga
aagtgcaaagagaagatgatgagaaaagacatgcccgagcatctgagccgtaaatgcaaa
caccgagagatcacctgtgaattctgcaatcacaagatggccctcacagagttacagaaa
cacaaagaaaccgtttgtccagcttttcctgtagcatgtcctaatcactgctcgtttgca
tccattttgagaagcgagctatccagtcaccagaacgactgcccaaaggcccaggtcacc
tgctctttcattcgctatggatgctcctacaaggggctaaatcaggagatgagggaacac
gagtctaattttgcatccgagcacctgagaatgatggcggtcaggaacaccacactggaa
gctaaggtagaggacgttaagagcgagctgatggagcgatataaagttctgcccagtctc
agcagtcgtctggcggaggttgaaacacagtacgaggagataagagaaaagctcagacag
ctggagcagaagatagccagcatgcagaaattgatgagcactcactcagagaaactgctc
gaggttgagatggagctgcgagagcttcgtccactgcgagctttaagggaggaggtggat
gctttgagaggctcagtggagagcatgcgttcaatcatatcttctctagactcgggtcgt
gttggatccagttctggtccggcgctggggtctttcgagcagcgactgacacgccacgac
gacatgttgagcgtccatgacatccgattggcagagatggacctgaagctccaggtgttg
gagacagccagtttcaacggtacgctcatctggaagatccgcgactacaaaaggcggaaa
caggaagccgtggcctccaaaacgctgtcgctctacagccagcccttttacacgggatac
ttcgggtataagatgtgcgcccgcgtctatttaaacggggacggaatgggtaaaggcacg
catctctcccttttctttgtggtgatgcgcggggaatacgatcctttgctgccgtggccg
ttcaaacagaaagtgacgttgatgctgatggaccaagggccggcgagaaaacatttaagc
gatgcctttaagccggaccccaacagcagtagctttcgccgacccaccggcgaaatgaac
atcgcctcgggttgcccgctctttgtggctcaaaccgtcctggagaacgggacgtatatc
aaagacgacaccatctacatcaaggtgaacgtcgacacctccgacctgcctgatccgtga
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