Misgurnus anguillicaudatus (oriental weatherfish): 129421524
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Entry
129421524 CDS
T09481
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
manu04040
]
129421524 (scn4aa)
Ion channels [BR:
manu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129421524 (scn4aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
ATP-synt_B
IQ
GPHH
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
129421524
NCBI-ProteinID:
XP_073722840
LinkDB
All DBs
Position
4:complement(13884972..13940269)
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AA seq
1811 aa
AA seq
DB search
MASLLPRTGVNAFRRFTPESLAEIERLIQEKSGREEVDGDEEEQPVPSSDLEAGKNLPMI
YGDPPDEFLNTPLEDIDPFYKAQKTFIVISKGNTIFRFSAEPALYFISPFNPVRRGAIKI
LIHSVFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEASIKVVSRGFCIGPFT
FLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMVNVMILTVFALAVFALIGLQLFMGNLRQKCIRWPIDNSTIFNDDYNFTMTNVTSFNQ
TFDFNAYINNEDNQYFLDGSLDALLCGNSSDAGKCPEGYTCMKAGRNPNYGYTSYDNFGW
AFLALFRLMTQDYWENLFQLTLRAAGKGYMIFFVVVIFLGSFYLINLILAVVAMAYDEQN
EATITEAREKEEEFQRLLEQLRNQEQEAGSKASLASQTTQSRGSNRTGSLQSLRDCNGKI
IPQVNSVHPDKEISAEDEHRSVSIQDEDQWKLSKRAASAVSVLTGTMEDIEDAQRPCPPG
WYKFADIFLKWDCCPPWLIFKKWVHFIVMDPFADLGITICIVLNTLFMAMEHYPMSEDFE
HVLSVGNLIFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
DCVCKISEDCVLPRWHMTDFFHSFLIVFRILCGEWIETMWDCMEVAGTGMCLVVFMMVMV
IGNLVVLNLFLALLLSSFSGDNLSATEEDGEMNNLQIAIARITRAFDWLKAFIARKVLQI
FGKKPPDVKEEEAEKDTELYSINHLQKETTTDAQTNCLTSSVPIAHCESDVEEDEEESSD
EDDIKVGLDDDLSVCSTADYQPPEPEPEPEEEEELEPEEPQPCFTEGCIRQCPCLNVDTT
EGWGKRWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFEDINIERRRVIKIVLEFADK
VFTYIFILEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSIVSLVANLLGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCI
NTTSEERFPMDVVNNKSDCMNLVYTNEARWVNVKVNYDNVGMGYLSLLQIATFKGWMDIM
YAAVDSREVEDQPSYEINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKFGGKDI
FMTEEQKKYYNAMKKLGNKKPAKPIPRPANKIQGLVFDLISQQFFDIFIMVLICLNMVTM
MVETDDQSAEKEEILYLINLIFVVVFTGECTLKLLALRQYFFTNGWNVFDFVVVILSIAG
LMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLF
LIMFIFSIFGMSNFAYVKKQAGIDDLFNFETFGSSIICLFEITTSAGWDGLLLPILNNGP
PDCDPNAENPGTEVKGNCGSPAIGIVFFSSYIIMSFLVVVNMYIAIILENFNVAQEESGD
LLCEDDFEMFNETWERYDLEATQFIDYDHLFDFADALLEPLRVAKPNRLKLIAMDLPVVT
GDKIHCLDILSAVTREVLGDTIEMVAMQSSIETKFKTNNPTSASFAPIVTTVRRKEEERA
AIIIQQTYRRHLLRRAVRHACFMHRSKSEIRSREDEEAPETEGLIARKMGALYGSNPELA
MALELRVRPMPADAERLPKTTSVVQHGASATYPRPQGQLVVPVELTSEAVLRSVPTSVRA
SEKLYIKESVV
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcctgctccctcgcacaggagtcaacgcgttccgtcgcttcacaccggagtcg
ctggcagagatcgaaaggctcatccaggagaagagcggcagggaggaagtagatggagat
gaggaggaacaaccggtgcccagcagtgacctggaggcagggaagaacctccccatgatc
tatggtgacccaccagacgagttcctcaacacccctttggaggacatagaccctttctac
aaagcccagaaaacgtttattgtcataagcaaaggaaacacaatcttcaggttttctgct
gaaccagcactttactttatcagtccatttaatcccgtcagaagaggagccatcaaaatc
ctcatacattcagttttcagcatgttcattatgatcaccatcctgtccaattgtgtcttc
atgaccatgagtaatcctccagcttggagtaaaactgtggaatatgtctttactgggatc
tacacctttgaagcatccatcaaagttgtgtcgcgaggtttctgcattggaccttttaca
ttcctccgtgacccgtggaactggctcgatttcatggtcatcagcatggcgtacgtcaca
gagtttgtagatcttggtaatgtttcagcactgagaacctttcgtgtacttcgagctctc
aaaaccatcactgttattcctggtttaaaaaccattgtgggggctctgatccagtctgtg
aagaagatggtgaacgtgatgattctcaccgtttttgcgttggccgttttcgcactcatc
ggtctgcagttgttcatgggcaatctacgacaaaagtgcattcgctggccgatcgacaac
agcaccatctttaatgatgactacaactttaccatgaccaatgtcaccagcttcaaccag
acttttgattttaacgcttacataaacaatgaagataaccaatactttctagatggaagt
ttagatgctttattgtgtggtaacagctctgacgctgggaagtgtccagaaggatacacg
tgtatgaaggccggcaggaacccaaactacggctacaccagctacgacaacttcggctgg
gcatttctggctctctttagactcatgacccaggactattgggagaatctcttccagcta
actcttcgtgctgctggaaagggctacatgatcttcttcgttgtggtcatcttcttgggc
tctttctacctcatcaatctgatcttggctgttgtcgccatggcttacgatgagcagaac
gaagccacaattactgaagctcgtgagaaagaagaggagtttcagagattgctggagcag
ctcaggaaccaagagcaagaggcaggcagtaaagcatctttggccagccagacgacacaa
agtcgaggttcaaacaggacaggttcactacagagtcttcgagactgtaatggcaaaata
attcctcaagtcaacagtgtccatcctgacaaagagatatcggctgaagatgagcacagg
tctgtgagtatacaggatgaagatcagtggaaactctctaaaagagcagccagtgctgtc
agtgtactcacggggaccatggaagatatagaagatgctcagaggccttgtcctcctggc
tggtataagtttgctgacattttccttaaatgggactgctgccctccatggctcattttt
aagaagtgggtccattttatagtgatggacccatttgccgatctaggtatcaccatctgc
attgtgctcaacacgcttttcatggccatggagcactacccaatgagtgaggatttcgaa
cacgttctctcagtgggcaacttgatatttacaggaatcttcacggcagaaatggtcctc
aagcttattgcactggacccttattattacttccaggtgggctggaacatttttgacagc
atcatcgtcacgctcagtctggtggagttaggactggccaatgttcagggtctctctgtt
ctccgctcttttcgtttgctgcgtgtcttcaagctggcaaaatcttggcccacccttaac
atgctgatcaagatcatcggaaactcggtgggtgctctggggaacttgactctcgtcctg
gccatcatcgtcttcattttcgccgtggtgggcatgcagctgtttggcaagagctacaag
gactgcgtgtgtaagatctctgaggactgcgtactgcctcgctggcacatgaccgacttc
ttccactcgttcctcatcgtcttccgaatcctgtgtggagagtggattgagaccatgtgg
gactgcatggaggtcgctggaaccgggatgtgtttggtggtcttcatgatggtcatggtc
attggtaacctggtggtgttaaatctcttcttggccctgctgttgagctcattcagcgga
gataacctgtctgctactgaagaagacggtgaaatgaacaatcttcagatcgccatcgct
cgcatcaccagggctttcgattggctcaaagccttcattgccagaaaggtgctgcagatt
tttgggaagaaacctcctgatgtgaaagaagaggaagcggagaaagacacagaactgtac
tcaataaatcacctgcagaaagaaacaacgacagatgcccagacaaactgtttaacatct
tctgtacctattgcccactgtgagtctgatgttgaagaggacgaggaggaatcttctgat
gaagatgacataaaggtgggtcttgatgatgacttgtcagtgtgcagtacggcggactat
cagcctccagaacctgagcctgaacctgaggaagaagaggaactggaaccggaggagcca
cagccctgtttcacagaaggttgcattagacaatgtccgtgtttgaatgtggacaccaca
gaaggatgggggaaaaggtggtggaacctccggagaacttgcttcaccattgttgagcat
gactactttgagaccttcatcatcttcatgatcctcctgagcagtggagctctggctttt
gaagacatcaacattgagcgccgtcgagtcatcaagatcgtcctggagtttgctgataaa
gtcttcacatacatcttcatcttggagatgttattgaagtgggtggcatatggtttcaag
acctactttaccaatgcatggtgctggctagacttccttattgttgatgtgtcgatcgtg
agcttagtcgccaatttattgggttattctgagctgggagcgatcaaatctctccgaacg
ctcagagctcttcgtccgcttcgagccctgtcaagatttgagggaatgagggttgtggtg
aatgcactcattggtgccatcccatctatttttaatgtgctgctggtgtgtctgatattt
tggctgatcttcagcatcatgggagtcaatctgtttgctgggaagttttattactgcatt
aacaccaccagcgaagaacgctttcctatggatgttgtgaacaacaagagcgactgcatg
aatctggtgtacaccaatgaggcgcgctgggtcaacgttaaagtcaactatgacaacgtg
gggatgggttacctctctctactgcaaatcgccacatttaaaggttggatggacatcatg
tatgcagcagtggattcaagagaggtggaggatcagccatcctatgagatcaacctctac
atgtacctgtattttgttatcttcatcatttttggctcatttttcaccctcaacctcttc
attggtgtcattattgataacttcaatcaacagaaggccaagtttggaggtaaggacatc
ttcatgacagaggaacagaagaaatactacaatgccatgaagaagctgggaaacaagaaa
cccgctaaacccatccctcgtccagcaaataagatccagggcctggtgtttgatttaata
tcacaacagttctttgatatcttcatcatggtcctcatctgcctcaatatggtgaccatg
atggtggagacggatgaccagagtgctgagaaagaggagattttgtacctgatcaacctg
atcttcgtggtggtcttcacaggagaatgtacgctcaagctgttggcgctcagacagtat
tttttcaccaacggctggaacgtctttgattttgttgttgtgattctgtctatagcaggt
ctaatgttatcagacatcatcgagaagtactttgtgtctcccaccctgtttcgcgtcatc
cgactggctcgaatcggtcgtgtgcttcgtctgataagaggggcgaaaggcatcaggact
cttttgtttgccttgatgatgtcacttcctgctctctttaacatcggactgcttctgttc
ctcattatgttcatcttctccatctttggaatgtctaactttgcctacgtgaaaaagcag
gcgggcatcgacgacctctttaacttcgaaacgttcggcagcagcatcatctgcctgttc
gagatcacgacctcggcgggctgggacggccttctgctgcccattctgaacaacggccct
ccggactgcgaccccaacgccgagaaccccgggactgaggtcaagggtaactgcggcagt
cccgccattggcattgtgttcttcagcagttacatcatcatgtccttcctagtggtggtg
aacatgtacattgccatcattctggagaactttaacgtcgcccaggaggagagcggtgac
ctgctgtgcgaggacgactttgagatgtttaacgagacgtgggaaaggtacgacttggaa
gcgacgcagttcatcgattacgaccacttgttcgactttgccgacgccttgcttgaaccg
ctacgggtggccaaacccaaccgcctgaagctgatcgccatggatttgcccgtggtgacg
ggcgacaaaatccactgtctggatattctttcggcagtgacccgagaggttctgggcgat
accatagagatggtcgccatgcagagcagcatcgagactaagttcaaaaccaacaacccc
acctccgcctcttttgcacccatcgtcaccacggtcagaaggaaagaggaggagcgtgcc
gctatcataattcagcagacgtaccgcagacatctgctcagacgcgccgtccgtcacgcc
tgcttcatgcaccggtcaaagagcgaaatcaggagtcgggaagatgaagaagcgcccgaa
accgagggcttgatcgcccggaaaatgggcgccctgtacggcagcaaccccgaactagcc
atggctctcgagctgcgcgttagaccgatgccagctgatgctgagcggctgcccaaaacg
acctcggtcgtacaacacggggcttcagcgacttaccctcgacctcagggacaactcgta
gtgccggttgagctcacgagtgaggctgtccttcgctccgtgcccacatctgtacgtgct
tcagaaaagctttacattaaagagtcagttgtgtaa
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integrated database retrieval system
