Misgurnus anguillicaudatus (oriental weatherfish): 129426523
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Entry
129426523 CDS
T09481
Symbol
abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu02010
ABC transporters
manu04146
Peroxisome
manu04977
Vitamin digestion and absorption
manu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129426523 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129426523 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
129426523 (abcd4)
04980 Cobalamin transport and metabolism
129426523 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129426523 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
manu02000
]
129426523 (abcd4)
Enzymes [BR:
manu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
129426523 (abcd4)
Membrane trafficking [BR:
manu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
129426523 (abcd4)
Transporters [BR:
manu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
129426523 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
DEAD
FtsK_SpoIIIE
AAA_29
AAA_7
AAA_15
AAA_22
ORC-CDC6-like
nSTAND6
AAA_5
nSTAND1
Motif
Other DBs
NCBI-GeneID:
129426523
NCBI-ProteinID:
XP_055038891
LinkDB
All DBs
Position
25:29597103..29606712
Genome browser
AA seq
605 aa
AA seq
DB search
MPAMKNSTNRPKLDWKFLQRFCSILKILFPSWANQNVRMFMTLLGVTLSVQLVIYQVGLI
PSQFYGILSEKNYSRFKDLVLFAVLLILINSTLKSLDQYVSSLLYVSWRKSLTEELHDTY
FQGRIYYTLNVLHKDIDNPDQRISQDVERLCKQMSTMASRLLVSPFTISYYTYQCFNSAG
WIGFVSIFGYFGIGTFVNKILIGPIVTMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGK
VEHMRTNRRLQILLSTQKSLMNKEFWLYIGVNTFDYMGSILSYIVIAIPIFAGVYDGLSP
GELSALVSKNAFVCIYLINCFTQLIDLSTTLSDVAGYTHRIGELREVMSDIAEKQRDQER
YDPLSKEPGDFDMYDDREAQTADTAFVLDKLSFRSPVSQELLVKDLTMKISEGTNLLVVG
NTGTGKTSLLRVLNFLWEPCNGSVDMTTCFGPRGVMFLPQKPYLTDGTLREQVIYPLKDI
YPASGSADDERIFKYLELSGLLNLLNRTGGLDAKVDWNWYDVLSPGEMQRLCFARLFYLQ
PKYAVLDEATSALTEEAEDLLYKACKHLGMTLISLGHRRSLEKHHDVILRLCGGGQWELV
KLKPE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatgaagaacagtacaaacagaccaaaactggactggaagttcctacagaga
ttctgcagtattctgaagatccttttcccatcctgggccaatcaaaacgtgcgaatgttc
atgacgctccttggcgtcacactttcagttcagcttgtgatttatcaagtgggtctgatt
ccgagtcagttttatggaattctgtctgagaagaactacagcagatttaaagatcttgtg
ttgtttgcagtcttactcatcctgatcaattcaacactgaaaagtctggaccagtacgtc
agcagcctgctttatgtgagctggaggaagtctttaacagaagaactccatgacacctac
tttcagggtcgcatttactacaccctcaacgtactacacaaagacatcgacaacccagac
cagcgaatcagtcaagatgtggagaggttatgtaagcagatgagcacaatggctagtcga
cttctcgtttccccgtttaccatctcttactacacttatcagtgctttaacagtgctggt
tggattggatttgttagcatctttggctacttcgggattggaacctttgtcaataagatc
ttgataggacccattgtgaccatgctggttgagcaagaaaaactagaaggagatttcagg
ttcaaacacatgcagattcgagtaaatgcagaatctgccgctttctacagggcagggaaa
gtggaacacatgcggacgaaccgaaggctacagatacttttatccacacagaaaagtcta
atgaacaaagagttttggctttacattggggtaaatacttttgactatatgggcagtatc
ctcagctatattgttatagcgatacccatctttgctggagtgtatgatggactctcacct
ggagaattgagtgcacttgtcagtaagaacgcttttgtctgcatttatctgataaactgc
ttcacgcaactcatagacctttcaaccaccttatctgacgttgctggatacacccacaga
attggagaactaagggaagtaatgtctgacattgccgagaaacagcgggaccaggaaaga
tatgatcctctttcgaaggaacctggtgactttgacatgtatgatgatagagaagctcag
acagcggacacagcgtttgtgttggataagctctccttcagatcgcccgtctcacaggag
ctgcttgtaaaagatctgaccatgaagatctctgaaggaacgaacctgcttgtggtggga
aacacgggaactggaaaaacatccttactgagagttctcaacttcctttgggagccatgc
aatggatctgtggacatgaccacatgttttggaccgagaggtgttatgttcctaccacaa
aaaccatatctcactgacggtactctgagagaacaggtgatctatccattaaaggatata
tatccagcatcagggtctgcagacgatgaacgaatatttaaatacctggaactctctggt
ttgttgaatcttctgaacagaactggagggctggatgcaaaagtagactggaattggtat
gatgttttgtcaccaggagaaatgcaaaggctttgttttgccagacttttctacctgcag
cccaaatatgcagtattggatgaagccacaagtgctctgacagaagaggcagaagatctg
ctgtataaagcctgtaaacatttgggtatgaccctcatcagtctgggtcaccggcgcagt
ttggaaaagcatcatgatgtcatattgcgactgtgtggagggggccaatgggaacttgtc
aaactcaaaccagagtga
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