Misgurnus anguillicaudatus (oriental weatherfish): 129429352
Help
Entry
129429352 CDS
T09481
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129429352 (otofa)
Membrane trafficking [BR:
manu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129429352 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
129429352
NCBI-ProteinID:
XP_055041933
LinkDB
All DBs
Position
22:complement(18757133..18853595)
Genome browser
AA seq
2079 aa
AA seq
DB search
MALVVYLKTVTELRGKGDRIAKVTFRGLSFFSRVLENCEDEARFEQAFRWPIGSQVDGDE
LLEIQVFNYSKVFTNRLIGTFCMVLQKVVEEGHLEVSDTLIDDNNTAIQTTIFIEIKYQT
MDGSVKVWNDGEFLDVPDDPDGTFQFETDSLLSGRSQSSGTSPGRSIHGIPTFRKAGKGV
FSAMKLGRTRANKDDHRKGEDPAILDAEDLDGKAMRMACGLDPDAISLASVTAVTTNVSN
KRSKPDIKMEASSGRPVDYQISVTVIEARQLIGLNMDPVVCVEIGEDKKYTSMKESTNCP
YYNEYFVFDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTVYAQPEHQFHHK
WAMLSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANESEEDDIEGNLLLPEGVPSERQ
WARFYIKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVLVQFAGQKGKTSVQKSSYE
PIWNEQIAFTEMFPPLCRRLKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGPA
WVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLMSIAVEILDTTSPEIMSSTEVQVEP
VSNISESATGKMEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNQIDGVSKPTSVKK
KKDGGGDNEEEESELIHNSSDEDAEDDGDLTSVPSTPPMKPVITDRNYFHLPYFEKKPCI
YIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSTNCN
RFVTLANKDQNQAGRTKLDRERLKSYMREMENMGQQAKTIRTQVKKNTVRDKLKLVLNFL
HRLRFLADEPQHSIPDVFIWMISNNKRIAYARIPSKDILYSIVDEEMGKDCGKVKAVFLR
LPGKKGFGPAGWTVQAKLEVYLWLGLNKQKKDFLSGLPSGFEENRASKGIGIQAVPPISL
VYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLLV
FDNVELYGEATELRDDPPIIVIELYDQDTVGKAEFIGRTFAKPLTKMVDEHYGPPRFPPQ
LEYYQIYRGNCAAGDLLAAFELLQIPYNEEEIRRALIAVHDFAVPQIKIGPAGCAALPPI
DGPTDSDRGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRVNLSQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTSLRK
FIYSPPDKTTNNWAHTARLANGHMTLTNGTCHSRPHSHPISHPAGDIVVNMDPEHNFKKM
DTVVKLDATSDAVVKVDLNEDEKDKGKKKKKKKKGDEAEEEEPDESMLDWWSKYFASIET
MMENLRAQEAALAEAEEKEDLEIAAESAEIKADEFSIKGTKPKEKSKDKKSSKDKKKNHD
GAEKRPPKPKVDELVVYNKELESEFDHFEDWLHTFNLCRGKAGDDDDHNVIDDDRIVGRF
KGSLCMYKLPLFAEITREAGFDPNMGMFQSIPHNDPINVLIRIYIIRATDLHPADINGKA
DPYIVIRLGKTELKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLI
GETKIDLENRYYSKHRATCGIASHYSVHGYNVWRDPQKPTQILAKLCKEGKLDAPQYGPG
GKVKVANRVFFGPTEIEDESGLKKQTDEHLALTVLRHWEEIPRVGCKLIPEHVETRPLLN
PDKPGIEQGRIEMWVDMFPMDVPAPGPAIEISPRKPKRYELRVIIWNTDEVILEDDDYFT
GEKSSDIFVRGFELRVIIWNTDDVILEDDAFMTGEKMSDIYVRGWLKGQQEDKQDTDVHY
HSLTGEGNFNWRFLFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSA
DDFLGAIELDLNKFPRGAKTAKQCTLDMVVKEQELPTISIFKQKRVKGWWPFVARDENDE
FELTGKVEAELHLLTAEEAEKSPVGLGRNDPEPLEKPNRPTTNLSWLLSPIRVTCIVAWR
QYKFGIVLTLLCIIGLIFLGLLFFSLPSAVTQKIFNISG
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtggtgtatctgaagaccgtcactgagcttcgtgggaaaggggaccgaatc
gccaaagtcactttcagaggtctctcctttttctcacgggtgctggaaaattgcgaggat
gaagctcggtttgagcaggcgtttcggtggccaattgggagtcaagttgacggtgatgag
ttgctggagatccaagtgtttaattacagcaaagtcttcactaacagattgatcggcacc
ttttgcatggtcctgcagaaggttgtagaggagggtcacctggaggtgtctgacactctt
atagacgacaacaacacagccatacagacaactattttcatagagatcaaatatcagacc
atggatggaagtgtgaaggtgtggaatgatggggaattccttgatgttccagatgacccg
gatggaacctttcagtttgagacagacagtctgctttctggacgtagccagagctcagga
acgtcacctggcagatcgatccatgggattcctacatttcgcaaagcagggaaaggtgtg
ttttcagccatgaaattgggcagaacacgcgccaataaagatgaccacagaaaaggagaa
gatccagccattttggatgctgaagatctggatggaaaggccatgcgtatggcttgtggg
ctggaccctgatgccatctcattggcctctgttactgccgtaactactaatgtctccaac
aaaagatcaaagcctgacatcaagatggaggccagctcaggacgtccagtggattatcag
atcagtgttacagttattgaggcccgtcagctgattggtctgaacatggaccctgtggtg
tgtgtggaaatcggagaggataagaagtacacttccatgaaagagtccacaaactgccct
tactacaatgagtactttgtctttgacttccacgtgcctccagatgtcatgtttgacaaa
atactaaagatctcagttatacattctaagaaccttctaagaagtggcaccctggtgggc
accttcaaactggatgtggggactgtgtatgcacaacctgagcatcagtttcatcacaaa
tgggcaatgctgtctgaccccgatgacatcacagctgggtgcaaaggttatgttaagtgc
gacattgccgttgtaggaaaaggagacaacatcaagactcctcacaaggccaatgaatca
gaagaagatgatatagaggggaatcttctgctcccagagggcgttccatctgagagacag
tgggctcggttttatattaagatttacagagccgaggggctgcctaaaatgaataccagc
atcatggccaatgtgaagaaagcttttattggagaaaatagggatcttgtggacccatat
gtcctggttcaatttgcagggcagaagggtaaaacctcagttcagaagagcagctatgag
cccatctggaatgagcaaatagcctttaccgaaatgttcccacctttgtgtaggcgattg
aaagttcagatccgtgattcagacaaggtgaatgacgttgccataggaacccatttcatt
gatctccgcaagattgcaaatgatggagacaaagggtttttgcccactatggggccagcc
tgggtgaacatgtacggttctacccgaaactacactctgatggatgagcaccaggacttg
aatgagggactaggggagggtgtgtccttcagggcacggcttctcatgagcattgcggtg
gagatcctggacacaacatctcctgagattatgagctctacagaggtacaagtggagcca
gtgtccaacatctcagagagcgcaacaggaaaaatggaggagtttttccttttcggatca
tttttggaggccacaatgatagacaggaaaattggagacaaaccaatcagctttgaagtc
actattggtaactatggtaaccagatcgatggtgtgagcaaacctacatcggtgaagaag
aagaaagacggtggaggggataatgaagaagaggagtctgagctcattcacaactctagt
gatgaagatgcagaggacgatggagatctgacgtctgtgccgtccacacctccaatgaaa
ccagtgatcactgacagaaattatttccacttgccgtactttgagaagaaaccttgcatt
tacatcaagagctggtggcaagatcagaggagacggctttacaactccaacatcatggac
aagattgcagataaactggaggaggggcttaatgatgttcaagaaatcataaaaaccgaa
aaggcgtttccagaacgcagacttaggggtgtgttagaagaacttagcacgaactgcaac
cgatttgttacactagcaaacaaagatcagaatcaagcaggaagaaccaaactggatcga
gagaggctgaagtcttacatgagggaaatggagaatatgggtcagcaggcaaagactatt
cgcacacaagtaaagaaaaacactgtgcgagacaaactcaagctagtccttaactttctt
catagacttcgcttcctagcagatgagccccagcatagcattcccgatgtgttcatatgg
atgattagcaacaacaaacgaatagcatatgcccgcatcccctccaaagacattctctac
tctattgttgatgaagagatgggcaaagactgtggaaaagttaaagccgttttccttagg
ttgccaggaaaaaaaggctttgggcctgctggctggacggttcaggctaaactggaggtg
tatttgtggctggggttgaacaaacagaagaaagactttctgagcggcctgcccagcggc
ttcgaagaaaacagagcgtcaaagggaattggcatacaagctgtgcctcccatcagctta
gtgtataacatgaagcaggtgtttcagttaagagcgcacatgtatcaggctcgcagcctg
tttgcggcagacagcagcggtctgtctgatccattcgccagagttttcttctccacccac
agccaggtgacagaggttttgagtgagactctttgtcccacatgggatcagttgcttgta
tttgataatgttgaactctatggtgaagccactgagctccgtgatgaccctccaattatt
gtcatcgaactgtatgaccaggacactgtggggaaagctgaattcattgggcgaacattt
gccaagccacttactaagatggttgatgaacactatggacctccacggtttccccctcag
ctggagtactatcagatctacagaggcaactgtgctgccggagatctgctggctgctttt
gaactacttcagattccttataatgaagaggagatcaggagggctcttattgctgtccat
gactttgctgtgcctcaaatcaagatcggtccagcagggtgtgcagcacttcctccaatt
gatggccccactgattctgatcgtggtccgattctgcccgttccattgggcatacgaccg
gttcttagccgatatcgcatagaggtcctgttctggggtctgagggaccttaaaagagtt
aacctctcccaggtggacagacctcgagtggatatcgagtgtgcagggaaaggagtccaa
tccgctctcattcagaactacaagaaaaatccaaacttcagcacattggtgaaatggttt
gaagtggatctaccagaaaatgagctgctgcacccaccgctgaatattcgtgtggtggac
tgcagggcattcggacgatacacattagtggggtctcatgccgtgaccagtctgcgcaag
tttatctacagcccgccagacaagactactaataactgggctcacacagctagactggca
aatggccacatgactctcaccaatgggacgtgtcattcccgcccccactcccaccccatt
tctcatcccgcaggtgacattgtagtcaatatggaccctgaacacaactttaagaagatg
gacacagttgtgaagcttgatgctacctctgatgctgttgttaaagttgacttgaatgag
gatgagaaagacaaaggaaaaaagaagaagaagaaaaagaagggagatgaagcagaggaa
gaggaacctgatgagagcatgctggactggtggtccaaatactttgcctcaatagagacc
atgatggagaacctcagagcgcaagaagcagctctggctgaggcagaagaaaaggaagat
cttgagatagcagcagaaagtgcagagatcaaagctgatgaattctccataaaaggcacc
aaacccaaagagaagagcaaagacaagaagagctccaaggacaaaaagaagaaccatgat
ggggcagagaaacgacccccaaagcctaaagttgatgaactcgtggtgtataataaagag
ctcgaaagtgaatttgatcacttcgaagactggcttcacaccttcaacctctgtagaggg
aaagctggagatgacgatgaccacaacgtgatcgatgatgacagaattgtgggccgattc
aagggctccctgtgtatgtataagctgccactgtttgcagagatcacaagagaggcagga
tttgaccctaacatgggcatgtttcaaagcattcctcacaatgacccaatcaatgttctc
attaggatttatatcattcgagccacagatttgcatcctgcagatataaatggtaaagcg
gatccgtacatagtcattcgactgggaaaaactgaacttaaggacaaagaaaattacata
tctaagcagctcaatcctgtctttggcaagtcatttgatatagaggccacatttcccatg
gagtctatgctgacagtggcagtatatgactgggatttggttggaacagatgacctgatt
ggggagactaagattgatttggaaaacagatactatagtaaacacagagctacctgcggc
atagcgtctcactactctgtccatggttacaatgtgtggcgggaccctcagaagccaact
cagattcttgctaagctgtgtaaagaaggcaaattggatgcaccccagtatggacctggc
ggcaaggtcaaagtcgcaaaccgtgtcttttttgggccaactgaaattgaggacgagagt
ggtcttaagaagcagacagacgaacacttggctcttactgttcttcggcactgggaggag
atcccacgtgttggttgcaaactcatccctgagcatgtggagacgaggccactcctcaac
ccagataagccaggcattgagcagggaagaattgaaatgtgggtggacatgtttcccatg
gatgtaccagcaccgggaccagccattgaaatatcaccacgcaaaccaaagagatatgag
ctcagggtgataatatggaatacagacgaggttattctggaagatgatgattacttcaca
ggggaaaagtccagtgacatatttgtaaggggctttgagcttcgcgttattatttggaac
actgatgacgttattctagaggacgatgctttcatgacaggagagaagatgtctgacatc
tatgtcaggggctggctaaagggacaacaggaggacaaacaggacacagacgtacattat
cactctttgacaggagagggaaacttcaactggcgctttctctttccctttgactatctc
atggccgaggagaagatagtcatctccaagaaggaatccatgttttcctgggacgagaca
gagtacaagattcctgctcgactcacccttcaagtatgggatgctgaccacttttctgca
gatgacttcctgggagcaattgagttggacttgaataaatttccccgtggggcaaaaaca
gcaaagcaatgcactcttgacatggttgttaaagagcaagagctcccaaccatctccatc
ttcaagcagaagagagtgaagggctggtggcccttcgtggcccgagatgagaatgatgaa
tttgagctcactggaaaagtggaggcggagctccatctactgacagcagaggaagcagag
aaaagtccggtcggtcttgggcggaacgatcctgaaccacttgagaaacccaatcgtcca
accaccaacctgtcatggctgttgagtccaatacgggtgacgtgcatcgtggcttggcga
caatataagtttgggatagtgttgactctgctctgcattattgggctcatttttttgggc
ctcctcttcttttctctaccttctgctgtgacccagaagatcttcaacatctcaggctga
DBGET
integrated database retrieval system
