Misgurnus anguillicaudatus (oriental weatherfish): 129431014
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Entry
129431014 CDS
T09481
Symbol
rigi
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04622
RIG-I-like receptor signaling pathway
manu04623
Cytosolic DNA-sensing pathway
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129431014 (rigi)
04623 Cytosolic DNA-sensing pathway
129431014 (rigi)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129431014 (rigi)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
manu04054
]
129431014 (rigi)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129431014 (rigi)
Pattern recognition receptors [BR:
manu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
129431014 (rigi)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
CARD
SNF2-rel_dom
DUF6507
PhoH
WDCP
RNA_helicase
AAA_22
AAA_19
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
129431014
NCBI-ProteinID:
XP_055044670
LinkDB
All DBs
Position
23:complement(33882101..33892048)
Genome browser
AA seq
939 aa
AA seq
DB search
MYEKEKENLKRCSDYFTKTLRPSFIKAFMIDHLDDVTVETILSEEETSVTAAAQLLLDKM
YDLNKQGWFQAFIDILWASEYKGLHAAIMDWDFSQFEALQEHRKTLEKIEPSIAKHMKPS
ELLAHMSDIFKQKETEEIRAMETNRGKIAASEMMVKILLRSDQPNWFKVLKMALEECDLT
HALQLLEPNEKVSKVQDEDMDTSTTETLCFEIREEGESDDTLPMSANDISHPEMSGGTTG
VGTGVRSGERKLREYQKELTAAAVNGQNTIICAPTGCGKTVVALAICENHLKQFPDKTKA
KIVFLATKVDVYEQQYKLFKEHFFSKDPSIRVTGMCGDMDDLSVLWLIENHEIVVMTAQI
LVNALHSGEVASLELLTLILLDECHNTTGKHPYNNIMTRYLDIKLNGGTHSLPQVVGLTA
SVGIGSFKNQPEAENNILQLCANLDSRAIATVSKHLDELRSYVHTPKKEFFEVPQRTSDP
FIRIIRQIMSNIEQLAQKIYNIESLTNIQNREYGSQTYEQWIVSVQKCCRVLQMNNSEEE
RRICRALYNYTEHLRKYNDALIITEDARTKDALDYLDAFFEDVRNAGFDETEKELTAFFD
SHRAQLQDLATDGQQNPKLEELKFILEEEYHNDDQTRTVLFVRTRALADAMKKWIEETDS
LKFLNPEVLIGKGRKSNSSRMTLSGMKGVLESFKSSDHSKILVATSVADEGIDIPQCNLV
LMYEYVGNVVKMVQVRGRGRAQGSRCFLISSCKERIEKEKLNMSKEQMVEKAVTRLQSSP
DELSHKVDMLQKEDKVRRDHIRSSPDKPKTQASYQLLCAKCKTFACLSDDLRVVQECHHI
ILDHSIFDRCTTAPHKRPKTFCGLTKKEKMLCAECKFDWGIIASYLNIQDLPVLKIESFV
LKDRETQKQLYFRRWRDVTFTIQEFDITEITPETWPLTP
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaaggagaaagaaaatttaaagcgctgcagtgattatttcacaaagacttta
cgaccgtcattcatcaaagccttcatgatagatcacctggatgatgtgacagtggagacg
attttgtctgaggaggagacgtctgtgactgcagctgcgcagttgctgcttgataagatg
tatgatctaaataaacagggctggtttcaagccttcatcgacatcctttgggcctcagag
tataaaggtctgcatgcggccattatggattgggacttcagtcagtttgaagccttgcag
gaacacagaaagactctggagaagattgaaccgtccattgctaaacacatgaagcccagt
gagctgctcgcacacatgagtgacattttcaaacaaaaagagactgaggagatcagagct
atggaaaccaatcgtggtaaaatagctgccagtgagatgatggtgaagattctcctgcgt
tcagatcaaccaaactggtttaaagtgctgaagatggctctggaggaatgtgatttaact
cacgccttacagttactggaaccaaatgaaaaggtttcaaaggtacaggatgaggacatg
gacacctccacgacagaaacattgtgttttgagattagagaagaaggtgaaagtgatgac
accctgccgatgagcgccaacgacatcagtcatccagagatgtccggcgggacgacaggg
gttgggacaggtgtacgttcaggtgagaggaaactcagagaatatcagaaggagctgacc
gctgctgccgtcaacggacaaaacaccatcatctgcgctcctacaggatgtggaaaaact
gttgttgctttggcaatctgtgagaatcacctgaaacagtttcctgacaaaacaaaggca
aagatcgtctttttggcaacaaaggttgatgtttatgaacagcagtataaactttttaag
gagcatttcttcagcaaggaccccagcatcagggtgacggggatgtgtggtgatatggac
gatctgtctgtgctctggctcattgagaatcatgagatagtggtaatgacggcccagatc
cttgtcaacgctcttcacagcggagaggtggcgtctcttgagctgttgacactcatacta
ctggacgagtgccataacaccaccggaaaacacccgtataacaacatcatgacccgttac
ctggacattaaactcaacggcggtacacactcactgccgcaggttgtgggattgacggca
tcggttggcatcggaagtttcaagaaccagccagaggcagaaaacaatatcttacaactc
tgtgccaacctggacagcagagctatcgccacagtgagcaaacacctggatgagctcagg
tcttacgtgcacacacctaaaaaagagttttttgaggttcctcagcggacgtctgatccc
ttcatcagaatcatcagacaaatcatgagtaacattgagcagctggcacagaagatctac
aacatcgagagcctgacaaacatccagaaccgtgagtacggctctcagacatatgagcag
tggatcgtgtccgttcaaaagtgctgtcgagttctgcagatgaataactctgaggaggag
agaagaatctgtcgagcgctttacaactacactgaacatctgcggaaatataatgacgct
ctgatcatcactgaggacgcccgaactaaagatgcgctggattatctggatgcttttttt
gaagacgtccgaaacgccggcttcgatgaaactgaaaaggaactcaccgccttctttgac
agtcaccgggcgcagttgcaggatttggccactgatgggcagcaaaaccctaaactagaa
gagctgaagttcattctggaggaggaatatcacaatgatgatcagactcgaaccgtcctc
ttcgtcaggacgcgagccctcgctgacgccatgaagaaatggatcgaagagacagattcc
cttaaattcctgaatcccgaagttttgatcggaaaagggcggaaatccaacagttcgaga
atgactctgagcgggatgaaaggcgttctggagtctttcaaaagttctgatcacagtaag
atcctggtcgccacatctgtcgctgatgaaggcatcgatatcccacaatgcaacctggtg
ctcatgtatgagtatgtgggtaacgtagtgaagatggtacaagttagaggccgtggtcgg
gcacagggcagtcgttgttttctcatctccagttgtaaggagcggattgagaaggagaag
ttgaacatgtctaaagagcagatggtggagaaagccgtcacgcgtctgcagagcagccct
gatgaactcagtcacaaggtggacatgctacagaaagaagataaagtccggagagatcac
atcagatccagtcctgacaaacccaaaactcaggccagctatcagttactctgtgccaaa
tgcaagacttttgcttgtttaagtgatgacctcagagttgtgcaggaatgtcatcatatc
attctggatcattccatcttcgaccgctgcacaaccgctcctcataagagacccaaaacc
ttctgtggtctcacaaagaaagagaagatgctgtgtgcggagtgcaaatttgactgggga
atcatcgcatcatatctcaacatacaggatctgcccgtgctgaagatcgagagtttcgtg
ctaaaggaccgtgaaactcagaaacagctctactttagaagatggcgtgatgtgacgttc
accatacaagagtttgacataacagagatcacaccagaaacctggccattaaccccttaa
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