Misgurnus anguillicaudatus (oriental weatherfish): 129436383
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Entry
129436383 CDS
T09481
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
manu04040
]
129436383 (scn4ab)
Ion channels [BR:
manu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129436383 (scn4ab)
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
FraC
HGL2_5th
Motif
Other DBs
NCBI-GeneID:
129436383
NCBI-ProteinID:
XP_055050450
LinkDB
All DBs
Position
19:33039372..33089266
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AA seq
1866 aa
AA seq
DB search
MASPALALMSSSYRRSSSIGCCSSPRSRDPGLSGVPAFMLFGQEDRALFNMSQLRDPEVV
ASLAQQNAKMASLLPNTGKDVFQRFTLESLAEIERRMAEEAAEQARMKAENIEVDEDDLP
KPSSDLEAGKVLPFIYGDPPPELLNVPLEELDPFYKAQKTFIVITKGNTIYRFNAEPACY
ILSPFSLTRRIAIRILIHSLFSMFIMVTILSNCVFMTMSDPPAWSKTVEYVFTGIYTFEA
MVKVLSRGFCIGSFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITV
IPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCIMWPPFNLTNET
LTADFNYTSFNGTNDGNSTFNFQEYINNPEHHYYVPGHMDALLCGNSSDAGKCPEGYTCM
KAGRNPNYGYTSYDTFAWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSF
YLINLILAVVAMAYAEQNEATRAEAKEKEEEYARIMDQLKKQADQRHIIVHGSNTSLSSV
KKGDDDFDGGGKWHNDFDGIALKPISGREGGTEITNGSRGTMTYLEVPGQQIRKQSAVSA
TENTMEELEDIQRPCPPCWYKFSDIFLKWNCCTPWVKFKRISYIIVMDPFTDLGITICIV
LNTMFMAMEHYPMTPEFEYMLTVGNLVFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSII
VTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHMHDFFHSFLIIFRILCGEWIETMWDC
MEVAGQGMCIVVFMMVMIIGNLVVLNLFLALLLSSFSGDNLSASDDDGETNNLLIAISRI
TRAIDWIKAFVIRQARRLLCLKPKQEGGKENKEDDSKPAIMNSNTTVIKVPIANGESDLD
SPCDDDDDSFSEDEDKDDIDDNTKIKDGDESSTCSTVDKPLDMLDSESEIEEDSTIPEDC
YTQQCIRRCPCLDVDIDYGSGKVWWNFRKTCFAIVEHNLFETFIIFMILLSSGALAFEDI
YIEQRRAIRIILEYADQVFTYVFVVEMLLKWSAYGFKVYFTNAWCWLDFLIVDVSLISLT
ANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLI
FSIMGVNLFAGKFYFCYNMTSEEYFLPSVVNNKSECDALAEVHDDVRWMNLKVNYDNVGM
GYLSLLQVATFKGWMDIMYAAVDSRDIEAQPDYESNLYMYIYFVIFIIFGSFFTLNLFIG
VIIDNFNQQKAKIRGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNCCQGLVFDFVTK
QFFDIFIMVLICLNMVTMMVETDDQNEEKERILYYINLIFIVIFTAECVLKLIALRYYYF
SVGWNVFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLL
FALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEGVIDDMFNFETFGNSIICLFMI
TTSAGWDGLLSPILNSGPPDCDPDLENPGSSVRGNCGSPAVGIVFFCSYIVMSFLVVVNM
YIAIILENFNVATEESSDPLCEDDFEMFYETWEKFDPSASQFISFGMLSEFCDTLKEPLR
VAKPNEAKLVSMDLPMVPGDRIHCLDILVALTTEVLGDSGQIDAMKSTMEEKFMANNPSK
ASYEPITSTFRRKQEEVSASTIQKAYRAHVLKRSLKHASYIYREKTGKKGKDEEAPEKQG
MIAKRMNYLYGDQGFEDDQASTIYFPQPGKKQQKAKGAPVRVQSDVVLYSAPFPIPAVTT
SKESLV
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctgctctggctttgatgtcctcttcttatcggaggtcttcatccatagga
tgctgctcctcgcccagatccagggacccggggctctcgggggtgcccgctttcatgttg
ttcggccaggaggacagagctcttttcaacatgtcacaattgagagacccggaggtggtg
gcatccctggcccagcagaatgccaagatggcgagtttactccctaacacaggcaaagat
gtgttccagcgcttcacgctggagtcgctcgccgagatcgagcgacggatggcagaggaa
gccgccgaacaggcgcggatgaaggccgagaatatcgaggtggatgaggatgacctcccc
aaacccagcagtgatttggaggcaggaaaggtccttccattcatctatggagaccctcca
ccagaactcctcaatgttccactagaagagttggatccattttacaaagcacaaaaaact
ttcattgtgataaccaaaggaaataccatataccgattcaatgctgaacctgcctgctac
attctgagtcccttcagccttactcgacgaatagccatcagaatactcatacattcactg
tttagcatgttcatcatggtaaccatcttgtcaaactgtgtgttcatgacaatgagtgat
cctccagcctggagcaaaacagtagaatatgttttcactggcatttacacctttgaggct
atggtaaaagtgctatccaggggcttttgcattggtagtttcacattccttcgagatccg
tggaattggctggatttcatggtcatcagtatggcgtacctgacagagtttgtagacctg
gggaacgtatcggctctgaggaccttccgtgttctccgtgccctcaaaacaatcactgtg
attccaggtctaaaaaccatcgtcggcgccctgattcagtcggtgaagaaactggcagat
gtcatgatcctcaccgtcttctgtctcagtgtgttcgctctcatcggcctgcaactcttt
atgggaaatctgcgacaaaagtgcatcatgtggcctccctttaacctgaccaatgaaaca
ctgaccgcagacttcaattacacaagcttcaatggcacaaatgacggcaacagcactttc
aactttcaggaatacattaataatccagagcatcactactatgtgcctggccatatggat
gcattactgtgtgggaacagttcggatgcaggtaagtgtcctgagggatacacatgcatg
aaagctggccgaaatccaaattatggctacaccagctatgacaccttcgcatgggctttc
ttagccctctttcggctaatgactcaagacttctgggaaaatttattccagttgaccctc
cgtgccgctgggaagacctacatgatctttttcgtggtcatcatcttcttgggctcgttc
tacctcatcaatctgattctggctgtggtggcgatggcgtacgcagaacaaaatgaagcc
accagagcagaagccaaagaaaaggaggaagagtacgcacgaatcatggaccagctcaag
aaacaagctgaccagaggcatataattgtacacggcagtaatacatcactgtccagtgta
aagaaaggtgatgatgacttcgatgggggtggcaaatggcataatgactttgatggtatc
gcgctaaagcccatttcaggtagagaggggggtactgagataaccaacggatccagagga
actatgacctaccttgaagttcctggccaacaaataagaaaacaaagtgcagtgagtgct
acagaaaacactatggaagagctggaggatattcaaaggccatgtcctccctgctggtac
aagttttccgacatattcctcaaatggaactgctgcacaccgtgggtgaaatttaagagg
attagctacattattgtaatggacccatttacggatctgggcattaccatctgcattgtg
ctcaacaccatgttcatggccatggagcattatccaatgactcctgagtttgaatatatg
ttgactgtggggaacttggttttcacaggcattttcacagcagaaatggtcctgaaactt
atcgcgctggacccgtattattactttcaggttggctggaatatttttgatagcattatt
gtaacaatgagtctggtggagctgggcttggccaatgttcagggcttgtctgtgctgagg
tcttttcgtctgatgcgtgtgttcaagctggcaaagtcatggcccacccttaacatgctg
ataaagatcattggcaattctgtgggtgctcttggaaacctcaccctcgtcctggccatc
attgtcttcatctttgctgtggtggggatgcagctttttggaaagagctataaggactgc
gtgtgtaagatcgcagcggattgtgagctgccacgctggcacatgcacgatttcttccac
tcattcctcatcatctttcgtattctgtgtggggagtggatcgaaaccatgtgggactgc
atggaggtggctggccagggcatgtgcatcgtagtctttatgatggtcatgattattgga
aacttggtggtgctgaatctcttcctggctttgctactcagctctttcagtggggacaac
ttgtcggcatctgatgatgatggggagacaaacaatcttctgatcgccatttctagaatc
acaagagccattgactggataaaagcgtttgttatcaggcaagccagacggttgctgtgc
ctgaagccaaagcaagagggtgggaaagaaaataaagaggatgattccaaaccggccatc
atgaattccaatacaacagtcatcaaggtgcccatagccaatggtgaatctgatttggac
agcccttgtgatgatgatgacgacagcttttccgaggatgaagacaaagatgacattgat
gacaacactaaaataaaagatggagatgaatcttcaacctgcagcacagtggacaaacct
cttgatatgctcgattcagaatcagagattgaagaggattcaaccatacctgaggactgc
tacacgcaacaatgtatcaggcgatgtccttgcctggacgttgatattgattatggatca
ggaaaggtgtggtggaactttcgtaaaacctgctttgctattgtggaacacaacttattt
gaaacctttatcatcttcatgattctcctcagcagtggagcattggcatttgaggacata
tacatcgaacaacgcagagcgatcagaatcatcctcgaatatgcagatcaggtcttcacc
tacgtgttcgtcgttgaaatgcttctgaaatggtcggcttatggtttcaaagtctatttc
acgaatgcttggtgttggctggactttcttatcgttgatgtgtcactgatcagcctgaca
gcaaatattttaggctactctgaactgggggccattaaatctctccgaactttgagagct
ttgagacctcttagagctctgtccagattcgaaggaatgagggtggtggtgaatgccctt
gtaggggccatcccatccatcttcaacgttctcctggtgtgtctcatcttctggctcatc
tttagcatcatgggggtgaaccttttcgctggaaagttttacttttgctacaacatgaca
tccgaagaatacttccttccctctgtggtcaataataagtctgaatgcgatgcgctcgcg
gaggttcatgatgatgtgcgatggatgaacctgaaggtcaactatgataacgttggcatg
ggctacctctccttactgcaagtggcaacatttaaaggatggatggacatcatgtatgct
gcagtggattcccgtgatatcgaagcgcagccggattacgagtccaatctctacatgtac
atttactttgttattttcatcatctttggctctttcttcacccttaacctgttcatcggt
gttatcattgataatttcaaccagcagaaggcaaagataagaggaaaagatatcttcatg
acagaggaacagaaaaagtactacaacgccatgaagaaacttggctccaagaagccacag
aaacctattcctaggcctacgaactgctgccaaggcttggtattcgactttgtcaccaag
caattcttcgacatcttcatcatggttctgatctgtcttaatatggtgaccatgatggtg
gagacagatgaccagaatgaagaaaaggaaaggattttatactatatcaatctgatcttc
atcgtgatcttcaccgccgagtgcgttctaaagctcatcgctctgcgatactactatttc
tctgtcgggtggaacgtctttgatttcgttgtggtcattctttcaatcgtaggtcttttg
ctggcggacattattgagaaatactttgtttcgcccacacttttccgtgtcatcagactg
gccagaatcggacgcgtcctgcgtctcattcgcggtgcgaaaggaatcaggacgttgctg
tttgcgctcatgatgtcacttcctgcactcttcaacatcggcctcctgcttttcctaatc
atgtttattttctccatatttggcatgtccaactttgcgtatgtcaagaaagaaggtgtc
atcgacgacatgttcaacttcgagaccttcgggaacagcatcatatgcttgttcatgatc
acgacgtccgccggctgggatggcctgctgtcacccattctcaacagcgggccaccagac
tgcgacccagatctggagaacccaggttcgtccgtcaggggcaactgcgggagcccggcg
gtgggaatcgtcttcttttgcagctacattgtaatgtccttccttgtcgtagttaacatg
tacatagccattattctggaaaacttcaacgtagcgacagaggagagcagcgatcccttg
tgcgaggacgattttgagatgttctacgaaacctgggagaagttcgatccgtccgcgtct
cagtttatcagtttcggcatgctgtcggagttctgcgacacgttgaaagagccactgaga
gtcgccaaacccaatgaggcgaaattggtttcgatggacctacccatggtccctggggac
aggatccactgtctggacatcctggtagcccttactacagaagtgctgggagattccggc
cagatagatgccatgaaatcaactatggaggaaaagtttatggcgaacaatccctcgaaa
gcttcgtacgagcccatcaccagcacttttagacgcaaacaagaggaggtgtctgcttcg
actattcagaaagcataccgtgcacacgtgcttaaacgctccctcaaacatgcttcatat
atatacagagagaaaacaggcaaaaagggaaaagatgaggaggctccagagaagcagggg
atgatcgctaagagaatgaactatctatatggagatcagggctttgaggacgaccaagct
tcgaccatctattttcctcagccaggaaagaagcagcagaaggctaaaggtgccccggtg
agggttcaaagcgatgtagtcttgtactccgccccctttcccatcccggccgtgacgact
tcgaaagagtcccttgtgtag
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