Misgurnus anguillicaudatus (oriental weatherfish): 129436506
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Entry
129436506 CDS
T09481
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03272
Virion - Hepatitis viruses
manu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129436506 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129436506 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129436506 (ldlra)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129436506 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
hEGF
EGF
Vgb_lyase
DUF4010
Motif
Other DBs
NCBI-GeneID:
129436506
NCBI-ProteinID:
XP_055050660
LinkDB
All DBs
Position
2:complement(40358918..40376047)
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AA seq
888 aa
AA seq
DB search
MDIILTLLTLLTVSFFCPVQSGLVTCDARQYQCGNGKCITLRWVCDETDDCGDGTDELPA
ACLAKTCKPSEFSCGGRLNQCIPKSWKCDGKADCENNADEEACEPRQCLNGEFRCGSGQC
VSRSFVCDDEADCDDGSDEASCPPTTCGSSSFRCSNTQCVPRLWVCDGDTDCSDGSDEAP
QNCGAGSSTVPRNPCLSMEFLCGSGECIHSNWKCDGGADCLDRSDEKNCSLATCRLDEFQ
CGDGSCIHGSRQCNQVYDCKDLSDELGCVNATHCKAPQKFKCRSGECIDMEKVCNKQRDC
RDWSDEPLRECDSNECLYSNGGCSHICNDLKIGYECLCPTGFRLVEKRRCEDIDECENPD
TCSQICVNQVGSYKCECEEGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYTRV
IPRLKNAVALDMNVASREIYWSDLSLKKIYRAQMDTADNSSQHSVVIGSGLDAPEGLAID
WIHGTIYWTDSIQGAISVATVDGNRRKTLFKENLAKPRAIVVDPIKNFIFWTDWGTPAKI
ERGGLNGGDRTALVTDNIIWPNGITLDLLNQRLYWVDSKLHTLSSISVQGGGRRTLIIDQ
GKLAHPLGLTVFEEKVFWTDVSNNAILSANRVTGSDIRKVAEHLSSPEDIVLYHNLKQPK
GINWCKFNNGGCEFLCLAAPQINQFSPKYTCACPDHMMLARDMRKCIPAVVTPATPISPE
MSTTNRPQEPSKTSLKPLLPSKASPKPLLPVPVIPTPATPGKPSQTNPQPSVSTQTDDQH
NSDVKAATKATPSTPLALYILLPLVLICLAAVGAVLFWRKWRQKNTNTIHFDNPVYQKTT
EDQVHLCRNRSSDGYLYPQRQSVSLDDEVDSDVHADTNSVSGLVKSHI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatattaacgttgctaacgttacttactgtttctttcttttgtccggttcag
tcaggtttggtgacctgtgatgcgaggcagtatcagtgtggtaatggaaagtgcatcacg
ttgagatgggtttgtgatgaaaccgatgactgtggtgacggcacggatgaacttcccgca
gcttgcttggcaaagacctgcaaaccctctgaatttagctgtggtgggcgactcaaccag
tgcatccctaagagctggaaatgtgatggcaaagctgactgtgagaacaacgcagatgag
gaagcctgtgaacctcggcagtgtttgaatggggaatttcgctgcggtagcggtcagtgc
gtgtccagatcgttcgtgtgtgacgatgaggcagattgtgatgatggtagtgatgaagca
tcctgtccacccacaacctgtggatccagctcctttaggtgtagcaacacgcagtgtgtt
cctcgactttgggtctgcgatggagacaccgactgttcggacggctcagacgaagcgccg
cagaattgtggtgcggggtcatcgacggtgcccagaaatccctgcctttctatggaattc
ctttgcggcagcggcgaatgcattcacagtaactggaaatgcgacggtggagcggattgt
ttggatcgatcagatgaaaaaaactgctctttggccacatgccgactggatgagtttcaa
tgcggtgatggatcttgcatccacggtagccgtcagtgcaaccaagtttacgactgtaaa
gatttaagcgatgagctgggctgtgttaatgcgacccattgtaaagcaccccaaaagttt
aagtgccgcagtggtgaatgtatcgacatggagaaggtttgcaacaagcagcgggactgt
agggattggtcggatgagccgctacgagagtgtgattcgaacgagtgtctgtatagcaat
ggaggctgctctcatatttgtaatgacctgaagatcggttacgagtgcctgtgtcccacc
ggtttccgtctggtggaaaaaagacgatgtgaagatatcgatgaatgtgaaaatccagac
acctgcagccaaatctgcgtcaatcaggtgggcagttacaagtgcgaatgtgaggagggc
taccagatggatcctgccagcaaggcttgcaaagctattggaaccattgcatacctgttt
tttaccaatcggcacgaggtgagaaagatgaccctggatcgcagcgagtacacgcgtgtc
attcccagacttaagaacgctgtggccctggacatgaatgtggcttctagagagatctac
tggtcagatttgtccctcaagaagatatatagggcacaaatggataccgcagataacagc
tcccaacacagcgtcgtaattggcagtggcttagatgctcctgagggtctcgctatcgac
tggatccatgggacgatctactggacggatagcatccaaggcgccatctcagtggcaact
gtggatggaaacagacgcaagacgctcttcaaagaaaacctggccaagcctcgtgctatt
gtagtcgaccctattaagaacttcattttctggaccgactggggtacaccagccaagatt
gaaagaggtggccttaatggaggagatcgtactgccctggttactgataatattatctgg
cccaatggaataacccttgatctgctgaaccagcgcctgtactgggtggactccaaacta
cacactctttccagtatcagtgtgcaaggaggtggtcgacgtactctaatcatagaccaa
ggcaaactcgcccatcctttgggtcttactgtttttgaggagaaagtattctggactgat
gtgagcaacaatgcgattttgagcgcaaatcgtgtgacgggaagcgacataagaaaagta
gcagaacatctctcatctccggaagatattgtcttgtaccataacctcaaacaacctaaa
ggaataaactggtgcaagttcaacaacggaggctgtgagttcttgtgtctggccgcacct
caaatcaatcagttttcacccaagtatacctgtgcctgcccagaccacatgatgctggcc
agagacatgagaaaatgcatcccagctgtggtgacaccagcaacccccatcagccctgaa
atgtcgacaacgaatcgtcctcaagaaccttccaagacctcactgaaacccttacttcct
tcaaaggcgtcaccgaaaccattacttcctgttcctgtgatccccaccccagctacccct
ggcaaaccctcccaaaccaatcctcagccttccgtatctacccagacagatgatcaacac
aacagtgatgtaaaagcagccacaaaagcaacaccttccactccgctggccttgtatatt
ttattaccactcgtcctcatctgtttggctgcggttggtgctgtactgttctggagaaag
tggcggcagaaaaataccaacaccattcactttgacaacccggtttatcaaaagaccacc
gaggaccaggtgcatttatgtaggaaccgtagttctgatggctatttgtacccacagcgg
cagtctgtgagtcttgatgatgaagttgacagcgatgtccatgctgacactaacagtgtt
tcaggactggtaaagagccatatttaa
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