Misgurnus anguillicaudatus (oriental weatherfish): 129439479
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Entry
129439479 CDS
T09481
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04010
MAPK signaling pathway
manu04137
Mitophagy - animal
manu04141
Protein processing in endoplasmic reticulum
manu04210
Apoptosis
manu04217
Necroptosis
manu04621
NOD-like receptor signaling pathway
manu04622
RIG-I-like receptor signaling pathway
manu04920
Adipocytokine signaling pathway
manu05132
Salmonella infection
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129439479
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129439479
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129439479
09143 Cell growth and death
04210 Apoptosis
129439479
04217 Necroptosis
129439479
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129439479
04622 RIG-I-like receptor signaling pathway
129439479
09152 Endocrine system
04920 Adipocytokine signaling pathway
129439479
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129439479
09171 Infectious disease: bacterial
05132 Salmonella infection
129439479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129439479
04121 Ubiquitin system [BR:
manu04121
]
129439479
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129439479
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129439479
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129439479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-C3HC4_4
ATG16
Sina_ZnF
DUF1664
Motif
Other DBs
NCBI-GeneID:
129439479
NCBI-ProteinID:
XP_055054090
LinkDB
All DBs
Position
4:complement(994537..1003428)
Genome browser
AA seq
583 aa
AA seq
DB search
MAAQEPSPPSSMENNKPGFPKKILANKLEEKHLCNCCQNILRRPVQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEDPTSILKQGCAFPDNAARREVENLPAVCISEGCSWTGSIKD
YELNHEGKCEFMILACSLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDLSVEKEKIHEHERACA
HDHLNLLLHCIMGMKVSLEGLQPQNLELAGHKAHELHQALRDLEARVSQLSAIPGPAGPP
TQGVLPAPSSSSASTQPLPPLPTSFTPLPSSVGAALELQLHSEKTKVAELGRRCQELEVK
AGTVEDVMCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEM
EGRLREMSATTFDGVFIWRIADFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNG
DGTGRGSHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQR
PVSDMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaagaaccttctccaccctcctctatggagaacaacaagccgggctttccc
aagaagattctggccaataaacttgaggagaaacatttatgcaactgctgtcagaacatt
ttgagaagaccggtccaagctcagtgtggtcatcgcttttgttcgtactgctttaaccgg
actgtgggatctggaccacagaaatgtaacgcttgcatcaaagaggacatctttgaagac
cctacatccattctcaaacaaggctgtgcgtttcctgataacgcggcccgtagagaggtg
gagaatcttccagccgtctgtatcagtgagggatgctcctggacgggaagcattaaagat
tacgagttgaaccatgaaggtaaatgtgagtttatgattctggcctgttcgttgtgcaaa
gagctcatcagattgaacgagcaggaacgacacaatgaacgtgaatgtcccgagagaacc
ctcaactgtaaatactgtaaagagccttttcacttcaaaaacatcaaggcacatgatgaa
atctgtcctaaatatcccatgatctgtgaaggatgtgccaaaaagaaaatccccagagaa
aagtacgttgatcacatcaagttctgcagtaaattcaggactccgtgcagatatcacgtg
gttggttgtgatttgtcagtagaaaaggagaagatacacgagcacgagcgtgcatgcgct
cacgatcatctcaatctgctgctgcactgcatcatgggtatgaaggtgagtctggagggt
ctgcagccccaaaatctggagctggccggtcacaaagcgcacgaactgcatcaggctctg
agagacctcgaagccagagtcagccagctgagcgccatcccgggcccggccggaccaccg
acgcaaggggttctccccgctccgtcgtcgtcctctgcctccacgcagcctctgcctcct
ctccccacatccttcactcctctgcccagctcggtaggcgccgccctggagcttcagctg
cacagcgaaaagaccaaagtggcagaactgggccgacggtgccaggagctggaggtgaag
gcggggacggtcgaagacgtgatgtgcgtgctgaaccgtgaggtggaacgattcgccact
accatggaagccagcaatcgtcagcacagactggatcaggacaaaatcgaggctctcagt
aacaaggtgcgtcagctggagagacaggtgggtgttaaagatctgaccgtggctgagatg
gagggcaggttacgcgagatgtctgccacaaccttcgatggagtcttcatctggcggata
gcagatttcaccaagaagagacaagacgcggtggctggtcgagctcctgccatgttttca
ccagcattttacaccagtaaatatggctataagatgtgtttgcgtatctatctgaatgga
gatggaacgggtcgtggatctcatctgtctctattcttcgttgtcatgcgaggaatgagt
gatgctctgctcaaatggccatttaaccagaaggtgacattgatgcttctggatcagagt
aacagagagcacatcatcgatgcgtttcgccccgacatcacttcatcatcatttcagaga
ccggtcagtgatatgaacattgccagcggatgtcctctcttctgtccactgtctaaactg
gagggcaagaactcttacatacgtgatgacaccatcttcatcaaagctatcgtggacctg
acgggcctttag
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