Misgurnus anguillicaudatus (oriental weatherfish): 129441176
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Entry
129441176 CDS
T09481
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04010
MAPK signaling pathway
manu04137
Mitophagy - animal
manu04141
Protein processing in endoplasmic reticulum
manu04210
Apoptosis
manu04217
Necroptosis
manu04621
NOD-like receptor signaling pathway
manu04622
RIG-I-like receptor signaling pathway
manu04920
Adipocytokine signaling pathway
manu05132
Salmonella infection
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129441176 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129441176 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129441176 (traf2b)
09143 Cell growth and death
04210 Apoptosis
129441176 (traf2b)
04217 Necroptosis
129441176 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129441176 (traf2b)
04622 RIG-I-like receptor signaling pathway
129441176 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
129441176 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129441176 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
129441176 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129441176 (traf2b)
04121 Ubiquitin system [BR:
manu04121
]
129441176 (traf2b)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129441176 (traf2b)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129441176 (traf2b)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129441176 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
Sina_ZnF
Paramyxo_NS_C
ADIP
TMF_DNA_bd
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
129441176
NCBI-ProteinID:
XP_055056976
LinkDB
All DBs
Position
4:complement(52692124..52716746)
Genome browser
AA seq
545 aa
AA seq
DB search
MMDSENNMQMISTGDAVSKWKAMARPSLPSSLDSTLPGISRDVLSVSMESKYQCQQCKEI
LRKPYQAQCGHRFCVFCFKQLTSTGPIPCEACRSEGIFEETISILNITVAFPDNAARREI
DSLPAKCNNEGCSWTGSLKDYESQHEGRCDFERVKCEACQALILLSEKDRHNERECEART
LNCKYCKVTFNFKEIKAHDEICQKFPMQCKECGKKKIPREKFQEHTKSCAKSKSACQFSE
IGCRAVVDNGKLQEHEQTSVMEHLRLMLGVLSSVRLRAEGGGEWQEDSGLGLYRGPEDAL
PAGAQATAHNAGRGGSPGVQQKVTALENIVCVLNREVERTALTLEALSRQHRLDQDKIEN
LSNKVRQLERTLTMRDLQLAESEQSLRELQFCTYDGVFIWKIADFSRRRQDAVGGRAPAM
FSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLD
QNNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIV
DLTGL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatggactctgaaaacaatatgcaaatgatcagcaccggtgacgctgtgagtaaatgg
aaggcaatggcacgcccatctttaccctcctctttggactccacattgcctgggatatct
cgggatgtgctgtcggtttctatggaatcaaaataccagtgtcagcagtgtaaagagatc
ctgcggaaaccttatcaagcacagtgtggccatcgcttctgtgtgttctgtttcaaacaa
ctcaccagcacagggccgataccctgcgaagcctgccgttctgagggtatatttgaggag
acgatttctatactcaatataacagtggcatttcctgataacgcagcgcgcagagaaatt
gatagcttgcctgctaaatgtaataatgaaggctgtagttggactggatcactgaaagac
tatgagagtcaacatgaaggtcgctgtgactttgagcgtgtcaaatgtgaagcatgtcag
gcactcatcttgctcagtgagaaagaccgtcataatgaacgcgagtgtgaggccagaacg
ctcaattgcaaatattgcaaagtcacatttaacttcaaagaaattaaggcacacgatgaa
atatgtcagaagtttcccatgcagtgcaaagaatgcggcaaaaagaaaatccccagagaa
aagtttcaagagcatacaaaatcttgtgcaaagtccaagtcagcgtgtcagttcagtgag
atcgggtgcagggcagtggtggacaatggtaagctgcaggaacatgagcagacaagtgtc
atggagcacctacgtctcatgttgggggttttgtcctccgtgaggttgcgtgctgaggga
ggtggagagtggcaggaggattccgggttgggattgtatcgcggacctgaagatgcactt
ccggcgggagcccaagccacagcgcataatgcaggaagaggaggcagccctggtgtgcag
cagaaagtgacggcattggaaaacatagtgtgcgtgctgaatcgagaggtggagcgcacg
gccctcaccctggaagcgctgtcacgccaacatcgactggaccaggacaaaattgagaac
ttgtcgaacaaggtgagacagctggaacgtactttaaccatgcgagacctgcagttagca
gaatcagagcagtctttgcgggagctgcagttttgcacatacgatggagttttcatatgg
aaaatagcagacttctctcgccgcagacaagatgcagtgggtggccgagcacctgctatg
ttctcacctgctttctactccagtaaatatgggtataagatgtgtctgagactttatctt
aatggtgatggcacaggcagaggtacacacctctccctcttctttgtggtcatgaggggc
aaatatgatgcactcctaaagtggcccttcagccaaaaggtgacattaatgcttttggat
caaaacaatagagagcacatcattgatgcctttagacctgacgtgagttccacttctttt
cagaggcccatcagcgagatgaatatagctagtgggtgccctcttttctgcccccttgct
aagctagcgggtaaaagctcctatctgagagatgatacaatatttattaaagccatagtg
gatctaactggcttgtaa
DBGET
integrated database retrieval system