KEGG   Misgurnus anguillicaudatus (oriental weatherfish): 129441176
Entry
129441176         CDS       T09481                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
manu  Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04010  MAPK signaling pathway
manu04137  Mitophagy - animal
manu04141  Protein processing in endoplasmic reticulum
manu04210  Apoptosis
manu04217  Necroptosis
manu04621  NOD-like receptor signaling pathway
manu04622  RIG-I-like receptor signaling pathway
manu04920  Adipocytokine signaling pathway
manu05132  Salmonella infection
manu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:manu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129441176 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    129441176 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    129441176 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    129441176 (traf2b)
   04217 Necroptosis
    129441176 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    129441176 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    129441176 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    129441176 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129441176 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129441176 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:manu03019]
    129441176 (traf2b)
   04121 Ubiquitin system [BR:manu04121]
    129441176 (traf2b)
Enzymes [BR:manu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129441176 (traf2b)
Messenger RNA biogenesis [BR:manu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     129441176 (traf2b)
Ubiquitin system [BR:manu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    129441176 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-RING_5 Sina_ZnF Paramyxo_NS_C ADIP TMF_DNA_bd zf-RING_6
Other DBs
NCBI-GeneID: 129441176
NCBI-ProteinID: XP_055056976
LinkDB
Position
4:complement(52692124..52716746)
AA seq 545 aa
MMDSENNMQMISTGDAVSKWKAMARPSLPSSLDSTLPGISRDVLSVSMESKYQCQQCKEI
LRKPYQAQCGHRFCVFCFKQLTSTGPIPCEACRSEGIFEETISILNITVAFPDNAARREI
DSLPAKCNNEGCSWTGSLKDYESQHEGRCDFERVKCEACQALILLSEKDRHNERECEART
LNCKYCKVTFNFKEIKAHDEICQKFPMQCKECGKKKIPREKFQEHTKSCAKSKSACQFSE
IGCRAVVDNGKLQEHEQTSVMEHLRLMLGVLSSVRLRAEGGGEWQEDSGLGLYRGPEDAL
PAGAQATAHNAGRGGSPGVQQKVTALENIVCVLNREVERTALTLEALSRQHRLDQDKIEN
LSNKVRQLERTLTMRDLQLAESEQSLRELQFCTYDGVFIWKIADFSRRRQDAVGGRAPAM
FSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLD
QNNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIV
DLTGL
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgatggactctgaaaacaatatgcaaatgatcagcaccggtgacgctgtgagtaaatgg
aaggcaatggcacgcccatctttaccctcctctttggactccacattgcctgggatatct
cgggatgtgctgtcggtttctatggaatcaaaataccagtgtcagcagtgtaaagagatc
ctgcggaaaccttatcaagcacagtgtggccatcgcttctgtgtgttctgtttcaaacaa
ctcaccagcacagggccgataccctgcgaagcctgccgttctgagggtatatttgaggag
acgatttctatactcaatataacagtggcatttcctgataacgcagcgcgcagagaaatt
gatagcttgcctgctaaatgtaataatgaaggctgtagttggactggatcactgaaagac
tatgagagtcaacatgaaggtcgctgtgactttgagcgtgtcaaatgtgaagcatgtcag
gcactcatcttgctcagtgagaaagaccgtcataatgaacgcgagtgtgaggccagaacg
ctcaattgcaaatattgcaaagtcacatttaacttcaaagaaattaaggcacacgatgaa
atatgtcagaagtttcccatgcagtgcaaagaatgcggcaaaaagaaaatccccagagaa
aagtttcaagagcatacaaaatcttgtgcaaagtccaagtcagcgtgtcagttcagtgag
atcgggtgcagggcagtggtggacaatggtaagctgcaggaacatgagcagacaagtgtc
atggagcacctacgtctcatgttgggggttttgtcctccgtgaggttgcgtgctgaggga
ggtggagagtggcaggaggattccgggttgggattgtatcgcggacctgaagatgcactt
ccggcgggagcccaagccacagcgcataatgcaggaagaggaggcagccctggtgtgcag
cagaaagtgacggcattggaaaacatagtgtgcgtgctgaatcgagaggtggagcgcacg
gccctcaccctggaagcgctgtcacgccaacatcgactggaccaggacaaaattgagaac
ttgtcgaacaaggtgagacagctggaacgtactttaaccatgcgagacctgcagttagca
gaatcagagcagtctttgcgggagctgcagttttgcacatacgatggagttttcatatgg
aaaatagcagacttctctcgccgcagacaagatgcagtgggtggccgagcacctgctatg
ttctcacctgctttctactccagtaaatatgggtataagatgtgtctgagactttatctt
aatggtgatggcacaggcagaggtacacacctctccctcttctttgtggtcatgaggggc
aaatatgatgcactcctaaagtggcccttcagccaaaaggtgacattaatgcttttggat
caaaacaatagagagcacatcattgatgcctttagacctgacgtgagttccacttctttt
cagaggcccatcagcgagatgaatatagctagtgggtgccctcttttctgcccccttgct
aagctagcgggtaaaagctcctatctgagagatgatacaatatttattaaagccatagtg
gatctaactggcttgtaa

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