Misgurnus anguillicaudatus (oriental weatherfish): 129441989
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Entry
129441989 CDS
T09481
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129441989 (dhx9)
03012 Translation factors [BR:
manu03012
]
129441989 (dhx9)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129441989 (dhx9)
5.6.2.6 RNA 3'-5' helicase
129441989 (dhx9)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129441989 (dhx9)
Translation factors [BR:
manu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129441989 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
ATPase
AAA_14
PhoH
Motif
Other DBs
NCBI-GeneID:
129441989
NCBI-ProteinID:
XP_055057729
LinkDB
All DBs
Position
2:complement(18788820..18801479)
Genome browser
AA seq
1288 aa
AA seq
DB search
MADIKNFLYVFCGKKKITPNYDIRAAGNKNRQKFTCEVRVEGYNYIGMGNSTNKKDAQTN
AARDFVNYLVRTKEINACDVPALGVSMPDGGNGGDGGEGGSGFGNLPSNCPLPPHLAVKS
EFETKGQETECSAPVPGITGLGYSGMNNTQWERGANLQDYYSRKEEQDAKATYESEEVDL
NAGLHGNWTLDNAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMTLFVRQLGRKIFA
REHGSTKKLAAQSCALSLVRQLYHLGVIEAYTGQTKKKDGETLDVYEVNLSDDLPNQVMS
IVQELGLQIPPPPQDPNSPVSLVQGKLAQFEPSQRQNTAGVVPWSPPQVNWNPWTSSNID
EGPLAFCTPEQINVDLLSELNYQLEQDRNLQATLAERNQLPVKNFEKEIMGAIHNNSVVI
IRGATGCGKTTQIPQYILDEFIKGGKASECNIIVTQPRRISAVSVSERVSFERGEEVGKS
CGYSVRFESALPRPHASILFCTVGVLLRKLEAGIRGISHVIVDEIHERDLNSDFLLVVLR
DVVQAYPDVRVILMSATIDTSMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMTQFVPPP
MDRKRKDKDEEGAGGDEEVNCNVICGPEYSPETKRAMSQLNEKETPFELIEALLKYIETL
KVPGAVLVFLPGWNLIYSMQKHLEMSPHFGGQQYRILPLHSQIPREEQRRVFEPTPEGVT
KVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR
VRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAIEPPPLD
AVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAACTISAAT
CFPEPFISEGKRLGYVHRNFAGTRFSDHVALLSVFQAWDEVRMGGEDAEIRFCEHKRLNM
PTLRMTWEAKVQLKDILVNVGFPEECLMNQIFNTVGPDNNLDVVISLLTFGSYPNVCYHK
EKRKILTTEGRNALIHKSSVNCPFTTQDMQYPSPFFVFGEKIRTRAISAKSMTLVSPLQL
ILLGSKKITSNGEIVELDEWIKLRIPHDVAGGVAAMRAAFEALVVEVTKDPEYIRNMDPI
NERLLNVMRLVSRPSSAGMNLMATNKRFGDGPRPPKMARTDFGGGGGGFGGRGGGYGGGG
GGYRGGGGGGGYRGGGGGGGYRGGGGGGGGYRGGGGYQGGGGGYRGSGGYRGGGGYRGGG
GGGGGYRGGGGGGGGGFRGGWGGNRGGY
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaaaaacttcctatatgttttttgtggaaaaaagaagataacgcctaac
tatgacatccgagcagctggaaataaaaacagacagaaattcacgtgtgaggtgcgtgtt
gagggttacaattacatcggcatggggaactccaccaacaagaaggatgctcagaccaat
gctgcccgagattttgtgaattatcttgttaggacaaaagagatcaatgcttgtgatgta
cctgctttaggggtcagcatgcctgatggaggaaatgggggtgatggaggtgaaggagga
agtgggtttggaaatcttccatccaattgtccactgccaccacatctggcagtgaagtct
gaatttgaaacaaaaggacaagagactgaatgttctgcacctgtccctgggatcacaggt
ttgggttactctggcatgaacaatacccaatgggagcgaggagctaatctccaagactat
tactccagaaaagaggaacaggatgcaaaagcgacctatgaatctgaagaggttgatctg
aatgctggcctgcatgggaactggactctggataacgcaaaggcccgtctgaaccagttc
tttcagaaagagaaaaaccaaacagactacaagtatagccaagtgggaccggatcacaac
aggagttttattgctgagatgacactctttgtaaggcaacttggtagaaagatttttgct
cgtgaacacggctcaaccaagaagctggctgcccagtcctgtgcgttgtctctggtccgt
cagctttaccatctaggggtcatcgaagcctatacagggcagaccaagaagaaagacggg
gaaactttggacgtatatgaagtgaatcttagtgacgatctaccaaatcaagtaatgagc
atcgtgcaggaacttgggctccagatccctccaccccctcaggatcccaacagtcccgtg
tctctggttcaagggaagttggctcagtttgaaccttcacaaaggcagaacactgcagga
gtggtgccgtggtctcctccacaggtcaactggaacccttggacaagtagcaacatcgat
gaaggaccactggccttttgcaccccagaacagatcaacgtggacctgctgagcgagctc
aactatcaactggagcaggacaggaatctgcaagcgactctagcggaaagaaatcagctg
cctgtaaagaacttcgagaaagaaatcatgggcgccattcacaataactcggtggtcatc
atccgaggagccactggctgtggaaaaaccacccaaatccctcagtacatactggatgag
ttcataaagggaggcaaggcatctgaatgcaacatcattgttactcagccaaggcggatc
agtgctgtgtcggtgtcggaacgtgtgtccttcgaaagaggagaagaggtggggaaaagc
tgcggctacagcgtgcgtttcgagtcggccctacccagacctcatgccagcatcctcttc
tgtacagtcggggtgttgctgagaaagttggaagctggtatccgtggcatcagtcatgtg
attgtggatgaaatccatgagagagacctgaattctgatttcctgctggtggtgttgaga
gatgtggtccaggcctaccccgacgtgcgtgtcatcctcatgtccgccaccattgacact
agcatgtttaaggaatatttcttcaactgtcccgtcattgaggtgcatggacgtgcacat
cctgtacaagagtattttctggaagactgcattcaaatgactcagtttgtaccaccaccg
atggataggaagagaaaagataaagatgaagaaggagcaggaggagatgaagaagtcaac
tgtaatgttatttgtggacccgagtatagcccagaaaccaagcgtgccatgtctcagcta
aatgaaaaggaaactccctttgaactgatcgaggctttgctgaagtacattgaaacgctg
aaagtacccggggctgtgctggtcttcctgccaggctggaatctcatctattcaatgcag
aaacatctggagatgagcccacacttcgggggtcaacaatacagaatcctgccacttcat
tctcaaattcccagagaggaacagaggagagtgtttgagcccacacccgagggtgtcact
aaggtcattttatccaccaacattgcagagaccagcattaccatcaacgatgtggtcttc
gtccttgactcctgcaagcaaaaagtgaagttgttcacctctcataacaacatgacaaac
tatgccacggtatgggcctccaagaccaacctcgagcagaggaagggacgagccggccga
gtcagacccggcttctgtttccacctgtgcagcagagctcgcttcgaaaagctagagacc
cacatgactccagaaatcttccgcacgccgctgcatgaggttgccctaagcattaagctg
ctgagacttggagccatcgggcatttcctgtccaaagccattgagcctcctccattggat
gctgttattgaagcagaacatacgcttagagagctggatgctttagacagtaatgatgag
ctgactccactgggacgcatactcgccaagctgcccattgaacctcgtctgggaaagatg
atgattatgggatgcatctttaatgttggagatgcagcgtgcaccatctctgcagcaact
tgtttccccgagcctttcatcagcgagggaaagcgtctcggctatgtccataggaacttt
gctggcacgcgtttctctgatcacgtggctttactttctgttttccaggcctgggatgaa
gtcaggatgggaggtgaggacgcagagatccggttttgcgaacacaagaggctcaacatg
cccactttgagaatgacctgggaggctaaagtccagctgaaagatatccttgttaacgtg
ggcttccctgaagagtgtctcatgaatcaaattttcaacactgtgggaccagacaataat
ttggatgtggtgatctctctgctgacatttggctcttaccccaacgtgtgttatcacaaa
gagaaaaggaagatcttgaccacagagggacgaaatgctcttatacacaaatcctccgtc
aactgtcccttcaccacccaagatatgcagtacccatctcccttttttgtcttcggggaa
aagattcgcacccgagctatctctgccaaatcaatgactctcgtcagccctcttcagctt
attctgcttggctcaaaaaagatcacctccaatggagaaatcgttgaacttgatgagtgg
atcaaactacggattccccatgatgtagctggtggtgtggcggccatgagggcggctttt
gaagccttggtggtcgaagtgaccaaagatccggaatacatcagaaatatggatcctatc
aatgaacgtttgcttaatgtcatgcggcttgtatctagaccgtcttcagcgggtatgaac
ctcatggccactaacaaacgttttggagatggtccacgaccacccaagatggctcgtact
gactttggaggaggaggtggaggctttgggggtcgtggaggaggatacggaggaggtggt
ggtggatacagaggaggcggcggcggtggtggatatagaggaggaggaggcggtggtgga
tacagaggaggaggtggtggtggtggaggatacagagggggtggaggctaccagggtggt
gggggtggttacagagggtcaggagggtatcgtggtgggggtggatacaggggaggtgga
ggaggcggtggtggatacagaggaggaggaggaggtggtggggggggattccgaggtggc
tggggaggaaacaggggtgggtattaa
DBGET
integrated database retrieval system
