Misgurnus anguillicaudatus (oriental weatherfish): 129444299
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Entry
129444299 CDS
T09481
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129444299 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129444299 (kdm2aa)
04121 Ubiquitin system [BR:
manu04121
]
129444299 (kdm2aa)
03036 Chromosome and associated proteins [BR:
manu03036
]
129444299 (kdm2aa)
Enzymes [BR:
manu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129444299 (kdm2aa)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129444299 (kdm2aa)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129444299 (kdm2aa)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129444299 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129444299 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
LRR_6
JHD
PHD
Cupin_8
LRR_4
LRR_Zer-1
Rubredoxin
Nop14
Motif
Other DBs
NCBI-GeneID:
129444299
NCBI-ProteinID:
XP_055060867
LinkDB
All DBs
Position
3:16834325..16858824
Genome browser
AA seq
1319 aa
AA seq
DB search
MENEQEILTIVDGGVLLMRRRGRKRKISDEDVTLKRAGTRRRYQDDAISDDEIDGKRTFD
LEEKLHSSRFSSDRVKRMEGKDFTYEYIQRGGLRDPIIFERPDGLGIKMPDPDFSVNDVK
TFVGSRRLIDVMDVATQKGTEMSMAQWCRYYETPASQRDKIYNVISLEFSHTKLESLVKR
PATVEMIDWVDNMWPRHLKERQRDSTNSIMEMQYPKVQKYCLMSVQGCFTDFHVDFGGTS
VWYHILNGSKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDRATDCQRIELKQGYTFIIP
SGWIHAVYTPVDTLVFGGNFLHSFNVPMQLNVASIEDRTRVPSKFRCPFFFEMAWYVLER
YLYSLTNTSYLIPEYQKYSLGIGIKQESSGCEVLNGHTKEERDESNAPPSGPGVKVHLTP
FELEGLWNLVGKLEALPAHKKYVPSGIHNAAALLHDIRALLKEHANDSPKLSYTGKPIVR
WPKRPSWYQPPPPPPPVIRPKLATTPIVPRPVKPSSNMSVLRRRRVRCKRCEACMRTECG
DCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEICGEGSLDVGEELMECSNCAQI
AHPSCLKVSGDGVINKDLPSCWECPKCVLGKDTESESSGSGDDITAQDGSGGLRGGAWHR
VGRPPSSLSHGSLQKHAAAPEQRLRKRINVEGAKAHKRKSSSLDPRVAKIYRRHGMEHDD
DSGSDDEDGDGGRKMSIHSRGGMSSSRRGYGTGRRGVWRGSTHRGNRGGGSLTSSLKMRR
GLGARGERGGRVRLRGGSHMRRRRYETEDEDDDDDDEDDDDDDEDEEDDDEDDSDEERHL
GRSDKQHRSRRRRHRGEDYDDDDEEDEDDDSDEQDFEGDDDEMEDMDDGGDDDDDDGENQ
SDSDTDPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPRTPNAPGF
IQRKTLPRARLRNSNLTPTGNGLSQSKGANASSRHHTRRNSNQDGRERDTLSPSSVSSRS
SVSPPPPPPSITTSSPPSLLSHPSFRDVGNERGCEKDIWVSVFRYLSRTDLAVCMRVCKA
WYKWCCDKRLWTRIDLSRCRSLSPQAISAIIKRQPVTLDLSWTPVSKKQIAWLIHHLPGL
KDLVMSGCSSLCVSALSSQSCPGLRTLDLCWAVAVKDTQIKDLIVQPGSESRSRLRGLLN
LRLSGLDISDSTLKLIVRHMPSLRRLDLSHCQGLTDQSVNLITASGCNTRNTLRQLNLAG
CNKLTDACLSYMKRLSALRLLDLRGCKNVTRRGCENFISDLSYCTLFCLTEDKLIQKIS
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaacaggagatcttgactatcgttgacggtggcgtgttgttgatgagacgg
agagggaggaaaaggaagatcagtgatgaagatgtgacactgaagcgggctggcactcgg
cgacgttaccaggacgatgccatttccgacgatgagatcgatggaaagaggacgttcgat
ctggaggagaagctgcatagcagccgcttcagctcggacagagtcaaacgaatggagggc
aaagatttcacatatgagtacatccagagaggggggctaagggacccaatcatctttgag
agacccgatggacttggcattaaaatgccagatccagatttcagtgtgaatgatgtgaag
acgtttgtaggaagtcgacgcctgattgatgtaatggatgtggctactcagaaggggacg
gagatgtcaatggcccagtggtgtcggtactatgagactccggcttcccagagagacaag
atttacaatgttatcagtcttgaatttagccacactaaactagagagtcttgtcaaaaga
cctgcaacggtggaaatgattgactgggtggacaacatgtggccacggcatttaaaggaa
aggcaaagagattccacaaattctatcatggagatgcagtaccccaaagtgcaaaagtac
tgcctaatgagtgttcagggctgtttcacagatttccacgtagactttggaggcacatct
gtgtggtaccacatactgaacggaagcaaggtgttttggttaatcccacccacaccacaa
aacctggagctgtatgaaaactgggtgttgtcagggaaacaaggagacatctttcttggt
gacagggccactgactgccagaggattgagctcaagcagggatacacgttcattatacca
tcaggttggatccatgcggtttacacacccgtggacacacttgtgtttggtggaaatttc
ctgcatagttttaacgttcctatgcagctgaatgttgccagcattgaggacaggacacgg
gtgccatcgaagtttcgttgtcctttctttttcgagatggcctggtacgttttggagcgt
tatctgtacagtctgaccaacacctcctacctcatccctgaataccagaaatactctctg
ggcatcggcattaagcaggaaagttcgggctgtgaggtacttaatggccatactaaagag
gagcgagatgagagcaacgctcctcccagtggaccaggggtgaaggttcacctgactccc
ttcgaactggaggggctttggaacctggtgggaaagttggaggctttgcctgcacataag
aaatatgtgccttctggaatacacaacgccgccgccttgctgcacgacatacgggcgctt
ttaaaagaacatgcaaacgactcccccaaactctcctacactggaaaacctattgtcaga
tggccaaagagaccctcctggtatcagccccctcctccccctccacctgtcatccgtcca
aagctggcgaccacacccatcgttccccggccagtgaaaccatcctccaacatgtcggtg
ctgcggcggcgacgcgtgcgctgtaaacgctgcgaggcctgtatgcgcacggagtgtggc
gactgcaatttctgcagagacatgaagaagtttggtggccctggcaagctcaaacagacc
tgtgtcctccgccagtgtctcgctcctggtctgccgctctctgccgtatgtgagatctgt
ggggaaggaagccttgatgttggcgaggagctcatggagtgctccaactgtgctcagatt
gcccatcctagctgtttaaaggtatcgggagatggagtgatcaacaaagatctacccagc
tgctgggagtgtcccaaatgtgttttgggcaaagacacagaatctgagtcgtcaggcagc
ggtgatgacatcacggcacaggatgggtcaggggggctcaggggcggggcgtggcacagg
gtcgggcggcccccctcttcactctcccacgggtcgctccagaaacatgcagcggcccct
gagcagcggctcaggaagaggataaatgtagagggagcgaaagcacataaacgcaaatcc
tcatctctagatcctcgtgtggctaagatctaccgacgtcatggaatggaacacgacgac
gattctggcagcgacgatgaggatggagatggtgggaggaagatgtcaatccactcaagg
ggtggcatgtcttcgtcccgcagaggttacggaactggcaggcgaggagtttggaggggc
tccacacatcgagggaatcgaggaggaggcagcttgacgagttcgctgaaaatgaggcga
ggacttggtgcaagaggagagagaggaggccgggttcggttaagaggaggatctcatatg
aggcggcgacgctatgaaaccgaggacgaagatgacgacgatgatgatgaagacgatgat
gatgatgacgaagatgaggaagacgatgatgaggatgatagtgacgaagagaggcatctg
ggcagatcagataagcaacatcgttcacggaggagacggcatagaggtgaggactacgat
gatgatgatgaggaggacgaagatgacgatagcgatgaacaggactttgaaggagatgat
gatgagatggaagatatggatgatggaggggatgacgatgatgatgatggagagaaccag
tcagattcagacactgatccacctgtcctactcgtctccgatttgaatgatgacctgctg
aatgattcctacctaacagtgactcttcagcgtcctcccaaagccaaacgtgaccccggc
tccatagtacctaaactggaggctgctatgtctccccgcacacccaacgctcctggtttc
atccagcgcaaaacattgcccagggcgcgactcaggaacagcaatctgacaccgactggt
aatggactttctcagtctaaaggtgccaatgcatccagccgccaccacacaaggcggaac
tccaaccaagacggtcgagagagagacactttgtcaccttcctcagtgtcttctcgttct
tccgtttctccaccacctccgcctccttccatcaccaccagctctcctccatcactcctc
tctcatccctctttccgtgatgtaggaaacgagcgaggctgtgaaaaggacatttgggtg
tctgtgttccgttacttgagtcggactgacttggctgtgtgtatgagagtctgcaaggct
tggtacaaatggtgctgtgataagcgcttgtggacacggatagatctgagccgctgtcgg
tcactaagcccccaggctatttcagccatcattaaacggcaacctgtgacactggacctc
tcttggacacctgtgtcaaagaaacaaatcgcctggctcatccatcacctaccaggtctg
aaagatctagtgatgtcaggttgctcttcattatgcgtgtcagctttgagttcacaaagt
tgcccgggtttgcgaacactagacctttgttgggctgtcgccgtcaaagatacacaaata
aaagacctaatagtgcagccaggcagtgaaagtcgcagtcggctaagaggtttgctaaat
ttacgtttgtctggcttggatataagtgactccacgctgaagctgattgtcagacacatg
ccttcgctgaggcggttggatttgtctcactgccaggggctcacagatcagtccgtcaac
ctgatcaccgcttctgggtgcaacacccgaaacacgctcagacaacttaatcttgcaggt
tgtaataagttgacagatgcttgtctgtcctatatgaagcgattatcagctctcagattg
ttggatcttcgaggatgtaagaatgtgactcgacgtggttgtgaaaactttatctctgat
ctctcttactgcaccctcttctgcctaaccgaagacaaactcattcagaaaatatcataa
DBGET
integrated database retrieval system
