Misgurnus anguillicaudatus (oriental weatherfish): 129444951
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Entry
129444951 CDS
T09481
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129444951 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129444951 (smcr8b)
Membrane trafficking [BR:
manu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129444951 (smcr8b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
CCDC17_middle_coil
Motif
Other DBs
NCBI-GeneID:
129444951
NCBI-ProteinID:
XP_055061961
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All DBs
Position
3:40971175..40977375
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AA seq
992 aa
AA seq
DB search
MIGSPDLLAFTKEPDFREVSTNPLALPEELSVPTYAVDTTPWSKISTAKFKKDFILLSEF
SEQVGPQPLLTVPHETKACGTFDLNHFSLRIMSVDYQTSLTGSGNMSTKLNFVEDSKVVL
GDSKEGVFAYVQHFTLYDLEARGFVRPFCLAYVSSGENKIIQQFQQLSAEFSKVSECLKT
GNRKNFAKELEGKLRDLEYTRAVLFQEMERENVNNSSVKYTNEREWTLKGVPIERDTEDE
KLKENLLLHKSEVKVKAEDGCGHLKEKVGTQNCTSKYESENTSNNRSVMPINIEVLEITG
DNERVDKQKKGASMPPTKTNELVSVEKCIQEHKSLLKQVIYYPTRKLRNSEFSPYEPDDL
PQSLEPDLDDTRLHGQLTRPVPECSVFHMNTPLHSPKLINTTVCRQFDRRLKTLEELCDE
YFHQQALQQLHSIERTFRGDGSHIYANQLCQNLLPKLKSTNFLFEDTYLEETDNLSSIRQ
ASFLPAPTILSEPVSLESYTSCVEMVPIKLELGVVTLSSTLNSPLNDNLPLSPEGSTVQT
EIEDKGGTSVLAADCDNSQDAEYVAGVMKTSISSGDSIEVLGTEKSFRSQGSSILNNTPL
PKSLPICTTAATEGLKQGRVPTRRTISGDSIEILSTTDSILPEDLHALYSCVIDEESPEQ
DTDETDMSQNQKDKQVDCVSVVGNAIPGIFVNEPHGCPLVTLTPPDPAMMFPSQDERHAS
CTPLSLLEEPCRTLRDDLSDCFSFRSTTASDCTFSTCTQGDKRDGGTKQRCSKVGRAALK
FLRQFPFAVHVVFSLLSGRTLVVLGSEEATVRRLVTGLSVYTPHAGRYRDSVQPWVSTPL
QLTDLLNWKLVGYNRTCCVTPGLPHFLGHYSRYISVLDVDQKTLRCPTYSGTLINQLVDP
RSHIIRGITYFLFVHSVLGKLVAKAFLSTFSHDIHISSMPGKSTQTVCGHDEFHRDDKKI
LHYLSELIKLDFTQAPPNVLRFSYTTNSVFKL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgatcggttctccagatttgttggcctttacaaaagagccagatttcagggaagtaagc
acaaacccattagcacttcctgaggaactgtctgttcccacttatgctgttgacaccaca
ccatggtctaagatatccactgcgaaattcaaaaaagattttatcctgttatccgagttt
tctgagcaagtcggcccccagcctttgcttacagttcctcatgaaaccaaagcttgtggg
acgtttgaccttaaccacttctcgctccgaatcatgtcggtggactatcagacctccctt
accggctcagggaacatgtccactaaactgaactttgtggaggactccaaagtagtttta
ggggattccaaggaaggagtgtttgcatacgtccagcactttaccctgtatgacctggag
gctcgagggtttgtgcgtcctttctgcctcgcctacgtgtcgtccggtgagaataaaatc
atacagcaatttcagcagctttctgcggagttctccaaagtttcagaatgcctgaaaact
gggaataggaagaactttgcgaaggaacttgaaggcaaactaagagatttagagtatacg
agagctgttttatttcaagagatggagagagagaacgtaaataactcatctgttaaatac
accaatgaaagggaatggacattaaaaggtgtacctatagagagagatacagaggatgag
aaacttaaagaaaatttactgttacacaaaagtgaagtgaaagtaaaagcggaagatgga
tgtggacatttaaaagagaaagtagggacacaaaattgtacatcaaagtatgaaagtgag
aacacctcaaataacaggtctgttatgcccatcaatattgaagtgttagagataacaggc
gacaatgagagagtggacaagcagaagaaaggtgcctcaatgccaccaactaaaacaaac
gagttggtcagtgtggagaaatgtattcaggaacataaaagccttctgaaacaagtcatc
tactatcccacaaggaagctcagaaactctgagttctcaccttatgaaccagatgacctt
cctcagtctctggagcctgaccttgacgatactagactgcatggtcagcttaccaggcca
gtaccagaatgcagtgtctttcacatgaacacacccctgcattctccaaagctgattaac
accactgtatgtaggcaatttgacaggcgcttgaaaactcttgaggagttgtgtgacgag
tacttccaccaacaggcactacagcaattgcactccattgaacggacattcaggggagat
ggcagccacatctacgcaaaccaactttgccaaaacctactccccaagctcaaatccaca
aactttttgtttgaggacacttacttggaagagactgacaatctttcatcaatccgtcaa
gcatcttttcttccagcacccacaatacttagtgaaccggtgagtcttgagtcatatact
tcctgtgttgaaatggtcccaatcaaactggagctgggagttgttactttatcaagtacc
ttaaatagtcctttaaatgataacctacccctgtcacctgaagggtccacagtacagact
gaaattgaagataagggaggcaccagcgttttggcagcagattgtgataattcccaggat
gcagaatatgttgcgggtgtaatgaagaccagcattagtagtggagacagtattgaagtc
ttaggaacagaaaagtccttcagatcacaaggttcaagtatactcaacaatacaccactg
ccaaaatctctacctatctgtaccacagcagcaacggagggtctaaagcagggcagggta
cccacaaggcggacaatcagtggagacagcattgagatacttagtacaacagactctatt
ctaccagaagacctgcatgctttatattcatgtgttattgatgaggaaagtccagagcaa
gacacagatgagacagacatgtctcaaaaccaaaaggacaagcaagtcgactgcgtttcc
gttgttggaaatgcaatacctggaatttttgttaatgagccacatggttgtcctcttgtt
actctaactccgccagacccggccatgatgtttccttctcaggatgagcgtcacgcatca
tgtacccctctttccttattggaggagccctgtcggacattacgggatgatttatcagac
tgctttagttttcgcagcaccactgcctcagattgcaccttctccacttgtactcaggga
gataaaagagacggtgggacaaaacagagatgcagcaaagtaggacgggcagcattaaag
ttcctgcgacaatttccgtttgcagtacacgtagtctttagccttttaagcggacgaacg
ctggtggtgctcggcagtgaggaggctacagtgagacgacttgttacgggattgtctgtc
tacaccccacatgcaggacgatacagggacagcgttcaaccttgggtttcaacgccactg
cagcttaccgacctgcttaactggaaacttgttggatataacaggacgtgctgtgtcact
ccaggtttgcctcactttctgggccattatagcagatacatcagcgttctagatgtggat
caaaagacactgcgatgtccaacatatagtggtactcttatcaatcagctggtggatcca
aggagccacattatacgagggatcacctatttcttgtttgttcacagtgtgctaggcaag
ctggttgccaaagcgtttctctcaacattttcgcatgatattcacatttccagtatgcct
ggtaagagtacacagacagtgtgtggtcatgacgaatttcacagagatgataaaaaaatc
ctccactatttatcggagctcatcaaactggattttacacaagctccacccaatgtcctc
cgatttagctacacaaccaactcagtattcaaactctaa
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