Misgurnus anguillicaudatus (oriental weatherfish): 129447218
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Entry
129447218 CDS
T09481
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04010
MAPK signaling pathway
manu04120
Ubiquitin mediated proteolysis
manu04140
Autophagy - animal
manu04144
Endocytosis
manu04517
IgSF CAM signaling
manu04620
Toll-like receptor signaling pathway
manu04621
NOD-like receptor signaling pathway
manu04622
RIG-I-like receptor signaling pathway
manu05132
Salmonella infection
manu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129447218 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129447218 (traf6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129447218 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129447218 (traf6)
04140 Autophagy - animal
129447218 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129447218 (traf6)
04621 NOD-like receptor signaling pathway
129447218 (traf6)
04622 RIG-I-like receptor signaling pathway
129447218 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129447218 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
129447218 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
manu04131
]
129447218 (traf6)
04121 Ubiquitin system [BR:
manu04121
]
129447218 (traf6)
Enzymes [BR:
manu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129447218 (traf6)
Membrane trafficking [BR:
manu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129447218 (traf6)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129447218 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
TRAF3_RING
zf-TRAF_2
DM
RING_XB3-XBAT31
ATG16
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
129447218
NCBI-ProteinID:
XP_073715316
LinkDB
All DBs
Position
21:complement(45062008..45067246)
Genome browser
AA seq
545 aa
AA seq
DB search
MRNKMACSDTKKSSLGGACCDSEYSSCAAAMEKERESYLSPTENPSTISVSHSLLPDQQG
YDVDFDPPLESKYECPICLMGLRSAVQTPCGHRFCHLCIKKSLSDTGQKCPIDNEVLLEE
QLFPDNFANREILSLTVRCRNEGCNEKMELRQLEKHSPKCRFATEQCTQCFEFVRISHMD
EHKTQHCLQRLMTCPDCAGSFVYAGRQIHKQMCPFANTACEYCEMELIRDQLESHCATDC
VKAPVACTFSTFGCREKMPRNELAQHMQEFTQMHMRCLAEFLRNQTLNGPLAPSIAHSSA
DERGASSRPAEHCQCSQELRNLRETVSELEGRLVLQDQLIRELYIKNETQRTQLTESRLK
LSTLEEATRELEAQQYQGVYVWRLENFSAHLRNQEAGQPVVLHSPPFYTGRPGYKLCLRL
HLQTPSAPRCSNYISLFVHTMQGEFDSQLSWPFQGTIRLSVLDQVEGQHHVEVMETKPDL
QAFQRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPRFDASLRREGVQPRG
PEPSL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataagatggcttgcagtgacacaaagaagtccagccttggtggtgcttgctgt
gacagtgagtacagcagttgtgcagcagctatggagaaggagagggagtcgtatctcagc
ccgacggagaacccctcgactattagtgtctctcattctttactaccagaccagcaaggc
tatgatgtagactttgaccctccactagagagcaagtatgaatgtccaatctgtctgatg
ggcctcaggtcagcagtgcagacaccatgtggacatcgattctgccatttgtgcattaag
aagtccctcagtgacacggggcaaaaatgtccaattgacaatgaagtgctgctagaagaa
cagcttttccctgataactttgccaatagagagatcctctcactcactgttcgctgccga
aacgaagggtgcaatgaaaaaatggagttgcggcaattggagaaacactctcctaagtgt
aggtttgccacagagcagtgcactcagtgttttgagtttgttcgtataagccatatggat
gagcataagacccagcactgcttacagcgcctcatgacctgccctgactgtgcaggcagc
tttgtatatgctggcagacagattcataaacagatgtgtccttttgctaatacagcgtgt
gaatattgcgaaatggagcttattcgggatcagttggaatcgcattgtgccacagactgt
gtaaaggcacctgtagcctgtaccttcagtacgtttggttgtcgtgaaaagatgccgaga
aatgagctggcccagcacatgcaagaatttacacagatgcacatgcgttgcttggctgag
tttctgcgcaaccagactctaaatggccctcttgcgccatcaattgcccattcctcagca
gatgaacgtggtgcctcctcgcggccagcagaacattgccagtgtagccaggagcttagg
aacttaagggagactgtttcggagctggagggacgacttgttcttcaagaccagctgatc
cgagagctgtacattaaaaacgagacccagagaacccagctcactgaatcgcgtcttaag
ctgagcacactggaagaggccacccgagagctggaagcccagcagtaccaaggtgtctac
gtgtggcggctcgaaaacttctcggcccatctgcggaaccaggaggccggtcaacctgta
gttcttcacagcccgcctttctacacgggacgacctggctacaaactttgccttcggctg
cacttgcagacccccagtgctccgcgctgttccaactatatctcgcttttcgtgcacact
atgcagggtgagtttgacagccagctctcttggcccttccagggcacgattcggctttcc
gtgttggatcaagtcgaagggcaacaccacgtggaagtaatggagaccaaaccggacctg
caggctttccagaggcccaccgtgcagcgcaaccccaagggtttcggctatgtcactttt
ctgcatctacaggctttgcggcagcgtgggttcgtgaaagaggatgtgttattggtgcgc
tgtgaggtcacaccacgcttcgacgctagcctcaggcgtgagggcgtccagcctcggggc
ccagaaccttcactttga
DBGET
integrated database retrieval system
