Misgurnus anguillicaudatus (oriental weatherfish): 129449934
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Entry
129449934 CDS
T09481
Symbol
tardbpb
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129449934 (tardbpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manu03019
]
129449934 (tardbpb)
Messenger RNA biogenesis [BR:
manu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
129449934 (tardbpb)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RRM_11
MSS18
Motif
Other DBs
NCBI-GeneID:
129449934
NCBI-ProteinID:
XP_073726511
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Position
8:complement(18132327..18137886)
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AA seq
408 aa
AA seq
DB search
MAEMYIRVAEEENEEPMEIPSEDDGTVLLSTVAAQFPGACGLRYRSPVSQCMRGVRLVDG
ILHAPENGWGNLVYVVNYPKETVLPDNKRKMEEIDASSATKIKRGDQKTSDLIVLGLPWK
TSEQDLKDYFSTFGDVIMVQVKRDVKTGNSKGFGFVRFAEWECQTKVMSQRHMIDGRWCD
CKLPNSKQGLDEPMRSRKVFVGRCTEDMSADELRQFFMQYGEVTDVFIPKPFRAFAFVTF
ADDQVAAALCGEDLIIKGVSVHISNAEPKHNNTRQMMERAGRFGNGFGGQGFGGNRGAMG
GSSSSLGNFGNFNLNPAMMAAAQAALQSSWGMMGMLAQQNQSGTSGANTSGTASTRDQPQ
TYSSGNSNYGSTSAALGWGSGSNSGTGGSGFNSSFGTSMESKSSGWGM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatgtacattcgtgtcgcggaggaggagaacgaggagccgatggagatccca
tcggaggacgacggcacggtactgctgtccacggtcgccgcgcagtttccaggcgcgtgc
ggcctgcgataccggagccccgtgtctcaatgcatgaggggtgtgcggctggtggacgga
atcctgcacgctcccgagaacggctggggaaacctggtctatgtggtaaattatcctaaa
gaaaccgttctgccagataataagaggaagatggaagagatcgatgcttcatctgcaaca
aagatcaagagaggagaccagaaaacttcggatctgatcgtgttgggtttgccatggaaa
acttcagaacaagatttaaaggactacttcagtacatttggggacgtcatcatggtgcag
gtcaagcgggatgtaaaaactggaaattcgaaaggatttggatttgtaaggtttgcagag
tgggagtgtcagacgaaggtgatgtcacagcggcacatgattgatggcaggtggtgtgac
tgcaaactaccaaactccaagcaaggtcttgatgaaccaatgagaagcaggaaggtgttt
gtgggccgttgcacagaggacatgagtgctgatgagctccgtcagttcttcatgcagtac
ggggaggtcacggacgtcttcattcccaaacccttcagggcatttgccttcgtcaccttt
gcggacgaccaagttgccgctgcgctgtgcggagaggatctgatcatcaaaggagtcagc
gtccacatctctaacgcagagccgaaacacaacaacactagacagatgatggagcgggcg
ggacgcttcggcaacgggttcgggggacagggtttcggagggaaccgtggtgccatgggg
ggtagctccagcagtttggggaatttcggaaatttcaacctcaacccggccatgatggca
gcagcccaggccgccctgcaaagcagctggggcatgatgggaatgttagctcagcagaat
cagtcggggacgtccggcgccaacacgagcggcacggcctccactcgggaccagccccaa
acgtacagctccggaaacagcaactacggcagcacctcggccgctctcggttggggctcc
gggtccaactcggggactggtggtagtgggtttaactcgagctttggtactagtatggag
tctaagtcgtcggggtggggtatgtaa
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