Misgurnus anguillicaudatus (oriental weatherfish): 129453702
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Entry
129453702 CDS
T09481
Symbol
slit1b
Name
(RefSeq) slit homolog 1b
KO
K06838
slit 1
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
manu00536
]
129453702 (slit1b)
Glycosaminoglycan binding proteins [BR:
manu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
129453702 (slit1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRR_9
LRRCT
LRR_1
EGF_TEN
LRRNT
LRR_14
JAG1-like_EGF2
EGF_3
EGF_DL_JAG
EGF_CA
EGF_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
129453702
NCBI-ProteinID:
XP_073717556
LinkDB
All DBs
Position
23:complement(11403633..11479544)
Genome browser
AA seq
1528 aa
AA seq
DB search
MLGWAGLWIWGALGALVLVGQSEACPPHCSCTGTTVDCHGLAFKNVPRNIPKNTERLDLN
ANNLTHIGKDDFAGLKHLRILHLMDNQIVSIDKGAFNDLKELDRLRLNKNRLQQIPELLF
LKNPSLSRLDLSENFIQVIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLN
NNNISTIPISSFNHMPKLRTFRLHSNSLRCDCHLSWLSQWLRQRPALGLYTQCSSPSNLH
GLNLAELQKKEFTCAGILDSSPQPCSLASGSCPPMCTCSNNIVDCRGKGLTAIPANMPES
MTEIRLEQNGIKSVPPGAFAPYKRLRRIDLSNNQISEIASDAFQGLRSLNSLVLYGNKIT
DLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLKS
IQTLHLAQNPFVCDCSLKWLADFLRSNPIETSGARCSSPRRLANKRISQIKSKKFRCSAK
EQYHIPGAEDTRLNKDCNSKPVCPPKCRCEATVVDCSNLRLTKFPEHLPLSTTELRLNNN
DLSILEATGLFRSLTHLKKINLSNNKISEIEDGAFDGASSVVELHLTANHLVSVRGGMFR
GMDGLRMLMLRNNHIRCIHNSSFAGLQNVRLLSLYDNQLTTIMPGAFDTLPNLSTLNLLA
NPFNCDCRLSWLGEWLRSRQIVTGNPRCQNPPFLREIPLQDVAKPDFRCDKAIVEDNTGC
VPKPECPEECNCVDTVVRCSNKHLVGLPHGVPHNVTELYLDGNQFVAVPKELSTFKHLQL
VDLSNNKISSLSNSSFANMSQLTTLILSYNALNCIPPLVFGGLSSLRLLSLHGNNISELH
QEIFRDSASLSHLAIGANPLYCDCRMRWLSDWVKSGYKEPGIARCAGPKGMDGKLLLTTP
GNNFQCTGPVDPSVSGKCSPCSSNPCQNQGRCHNDPVHLYKCICPQGYKGKICDIPIDAC
EGNPCVNGGTCNTKEARKGFSCTCPLGYDGQFCEVDVDDCVDNKCENGTICVDGVGNYTC
VCPHPFSGPKCEEYEEDLCYPGQNPCHRGSTCIPTVTGPKCICPPGFVGDDCSIDYNECD
GHYCQNGARCVDHVAGYSCVCPQGYSGRLCEVALMPSGCELVHCENGAPCVESEAGAVCQ
CLPGFGGSHCEKLLSVNFIDRDSYLLLSDLKNWPQTNITLQVSTAEDNGVLLYNGVNDHI
AVELHEGHVKVTYDSGNQPGSTIYSSEIVNDGEFHTVELVTYERMVNLSVDGGLPTTLDS
MGHVQPLIRDAPLYVGGKPENAQSLSFNQWPGLNGSSFQGCIRNLYINNELQDFTRTQMK
PGVVPGCQPCQELRCVHGLCQPATAVGPVCHCKAGWGGPHCDQVLLMAAVNPCQKNKCVH
GTCVPVDIQSYRCECAEGFHGSLCSQPEVPPDPCTALTCQHGYCELSRTGQAQCICDSGY
SGRLCDIVSPCQGESVRDFQRIRRGEVQCRSTQPLSWLECRGGCRADTGLCCTSTRVRRR
RYSFECDDGSSFTQDVEKTVECGCNKCV
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttgggctggtttgtggatttggggtgcactgggtgccctggttctggtgggt
cagtctgaagcgtgcccacctcactgttcctgtacggggaccaccgtggactgccatgga
cttgccttcaagaatgtgccacgaaatataccaaagaacacagaaagactagacttgaac
gcgaacaatctcacacacattggaaaggacgactttgctggactgaagcacctgaggatt
ttacacctcatggataatcaaattgtgtctatagacaaaggagcattcaatgatctcaag
gagttggacagattgcgtctcaacaaaaatcgtctccagcaaatccccgagcttttgttc
ctgaagaatccgtctctctccagactggacttaagtgagaacttcatacaggtcatacca
aggagagcgtttcgaggcgctacggacatcaagaacttacagctggacaagaaccacatc
agctgcattgaggatggagcatttcgtgccatgagagttttggaggtcctcacactgaac
aacaacaatatcagcaccattcctatctccagcttcaatcacatgcccaaattacgtaca
ttccgtctgcactctaacagtttgcgatgtgattgtcatttgtcctggctgtctcaatgg
ctcagacagagaccagcgctgggtctgtacacacaatgcagttctccatccaacctgcac
ggcctcaacctcgctgaactacaaaagaaagagttcacgtgcgctggtattttggattca
agtccccagccctgtagcctggcgtctggttcttgtccgccaatgtgcacctgcagtaac
aatattgtggactgtagaggaaaaggtctcacggccattccagccaatatgccagaaagc
atgactgaaatacgattagagcagaatggtattaaatctgttcctccaggagcgtttgcc
ccctacaagagactgcgtagaattgatttgagtaataaccaaatatctgaaattgcctct
gatgcgtttcaaggtttacgctcactcaactcactggttctttatggaaataagattaca
gatctgcctcgaggtgtttttgacggattgagcgcattagaattactactattaaatgcc
aataaaatccactgcgttcgtgtaaacgtcttccaggacctggaaaacctgtctctattg
tctctgtatgacaataagatccagactttagccaaagggacatttgctccactgaaatcc
atccagacattacacttggctcagaatccattcgtctgtgactgcagtttaaagtggctg
gccgattttttgcgctccaacccgattgagaccagcggtgcacgctgctcgagcccgcga
cgtctcgccaacaaacgcatcagtcaaattaaaagcaagaagtttcgatgttcagccaag
gaacagtaccacattccaggtgcggaggacacgcgcttgaataaggactgtaacagcaag
cctgtgtgtccaccaaaatgtcgctgtgaagctactgtagtggactgctcgaatttgcgt
cttaccaagttcccagagcacctgccactctctactactgaacttcgtcttaataacaac
gacctgtccatcctggaggcaacaggactgtttcggtccctaacacatctgaagaaaata
aaccttagcaacaataaaatctctgagattgaagatggagctttcgatggtgcgtcgtct
gtggttgaacttcacctgactgccaatcacttggtgtccgtgcgtggaggaatgttccgg
ggaatggacggattacgcatgctgatgctcaggaataatcacatccgttgcatccacaac
agcagctttgctggccttcaaaacgttcgtctgctctcgctctacgacaaccagcttacc
acaatcatgccaggagcgttcgacacattaccaaacctctctaccctaaacctgctggca
aacccttttaattgcgattgtcgtctgtcttggttgggagaatggcttcgctctcggcag
attgtgacagggaatcctcgctgtcagaaccctccttttctgagagagatcccgttgcag
gatgtggcaaagcctgacttccgctgtgacaaagctatagttgaagacaacactggctgt
gtccccaagccggagtgtccagaggagtgcaattgtgtggatactgtggtgcgttgcagt
aacaaacacttggttggcctaccccatggcgtcccacacaacgtcactgaactatacctg
gatgggaatcagtttgttgcggtacccaaagagctttcaacatttaagcaccttcagctc
gtggacttgagcaacaataaaatcagttccctatccaactcatctttcgccaacatgagc
cagctcaccacactaatcttgagttacaatgcattgaactgtattcctcctcttgtgttt
ggaggtctgtcctctctacgattgctctctcttcatggcaacaatatttccgaattacac
caagaaatcttcagagattctgcatctttatcacacctggccatcggtgcaaacccgctc
tactgtgactgtcgtatgcgttggctgtctgactgggtgaaaagtgggtataaggaacct
ggtatcgcccgttgtgctgggccaaaggggatggacggaaaactgctgcttaccacgcca
ggcaataatttccaatgcacaggccctgtggacccatctgtgtctgggaaatgcagtcca
tgttcttcgaacccctgccaaaatcaaggccgatgccacaatgaccctgtacatctgtac
aaatgcatctgtcctcagggttacaagggaaaaatctgtgatattcccatcgacgcctgt
gaaggcaatccatgtgtaaatggaggaacttgcaacacgaaagaggcaagaaaaggcttc
agctgtacgtgtcccctgggatacgacggtcagttctgtgaggtagacgtcgatgattgt
gtagataacaagtgtgaaaatggcaccatctgtgtggatggagtgggaaattacacctgt
gtctgtcctcatcccttctcaggcccaaaatgtgaagagtatgaggaagatctgtgttat
cctggacaaaatccttgccatcgtggctctacttgtataccaacagtcacaggaccaaaa
tgcatttgtccacctggttttgttggcgatgactgcagtatagattataatgaatgtgat
gggcattattgtcagaatggtgctcggtgtgtagatcatgtagcaggttatagctgtgtt
tgcccacagggttacagtggtcggttatgtgaagtggctcttatgccatcgggctgtgag
ttggtgcactgtgagaatggcgccccctgtgtggagagtgaagcaggtgcagtgtgtcaa
tgtctgcctggatttggggggtcacattgtgaaaagcttctcagtgtcaacttcatcgac
agagactcgtacctgctgctgagtgatcttaaaaactggccccagaccaacatcactcta
caggtctctacggcggaggacaatggcgtccttctctacaatggagtcaatgaccacatt
gctgtagaactgcatgaaggacacgtcaaagtgacctacgattcaggaaaccagccaggc
agtactatttacagctcggaaatagtgaacgatggagagtttcatacagtcgagttggtt
acatatgaacggatggtcaatctatcagtcgatggaggacttcccacgactctagacagc
atgggacacgtccaacctctcatcagagatgccccactatacgtcggtggtaagcctgaa
aacgcccagtcgttgtcgtttaaccagtggccgggtcttaatggatccagttttcagggt
tgcattcggaatctgtacattaataatgagctacaggacttcactcggacccagatgaag
cccggagtggtgcccgggtgtcagccctgtcaggaactccgctgtgtgcatggactgtgc
caaccggccaccgctgttggacccgtgtgtcactgcaaggcgggctggggtgggccacac
tgtgatcaagtccttcttatggctgccgtcaacccgtgccagaaaaacaagtgtgtccat
ggtacgtgtgttccagtagacattcagtcttatcgctgcgagtgtgcagagggttttcat
ggctctttatgcagtcaacctgaagttcccccagatccctgtacagctcttacctgccaa
catggctactgtgagttatcacggacgggtcaggcacagtgcatctgtgacagtggatac
agcggacgcttatgtgacatagtgtctccctgtcagggtgaatccgtgagggatttccaa
cgcatacgtcgcggtgaagtccagtgtcggagcacgcagccgctgtcgtggctggagtgt
cgcgggggctgcagggcggacacgggcctctgctgcaccagtaccagagtacggcgaaga
cgctacagttttgagtgtgacgacggcagttcatttacgcaggacgtcgagaagaccgtt
gaatgtggttgtaataagtgtgtgtag
DBGET
integrated database retrieval system
