Marinomonas arctica: IBG28_11940
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Entry
IBG28_11940 CDS
T06902
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mard
Marinomonas arctica
Pathway
mard00300
Lysine biosynthesis
mard00550
Peptidoglycan biosynthesis
mard01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IBG28_11940
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IBG28_11940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mard01011
]
IBG28_11940
Enzymes [BR:
mard01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IBG28_11940
Peptidoglycan biosynthesis and degradation proteins [BR:
mard01011
]
Precursor biosynthesis
Amino acid ligase
IBG28_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QNT04438
UniProt:
A0A7H1J1S2
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All DBs
Position
complement(2571031..2572497)
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AA seq
488 aa
AA seq
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MSQIHHTQLLDLAGYPLEDIPHSAVYSHLETDSRKVDGDAVFFALPGVASNGWDHLDQVV
ALGCKVAVVPEYLHLQRNDIELLSVADPARLLVVCLHAYFGRMPKKMVAVTGTNGKSSIC
FYVAQLAQFVGFKSGLVGTFGVGPLDKLSESKQTTPDLLSMHLILMAMADSGVDFVAFEA
SSHALDQGRLEGVPFQTAVFSNLSRDHLDYHGDMNSYALAKQRLFSFPSVTHSVFCLDDA
YAGFMAESAVDSRHYYYSEQNSKADFYVKQLALESAGCRFVLCHPDGEVPVFLPLLGRFN
VQNALAALASLWAYVDDKQRLIAGLSCLSGAPGRMEKVHLPHSPLVVVDYAHTPDALAVA
LQALKAHSSSRLICVFGCGGDRDRGKRPLMMAAAMQNADCVWLTSDNPRTESIEQIFSDI
LAQTNQGEAFSFEPDRRVAIRQAILSAGPNDVVLIAGKGHETYQDIEGIKHHFDDKEEAL
KAVEAYVN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaattcatcatactcaattactcgatttggcggggtatcctttagaggatatc
ccgcattctgctgtttatagccatttggagaccgacagtcgaaaagtggatggcgatgcg
gtgttttttgctttgccgggcgtcgcatcaaatggctgggatcatttggatcaggtggtt
gcattaggttgcaaagtagcggtcgttcctgaatatcttcatttgcagcgcaatgatatt
gagcttctgtcggttgctgatccagctaggttgttagtggtatgtttgcatgcatatttt
ggtcgcatgccgaaaaaaatggtggcagttactggtacgaatggaaaatcttctatttgt
ttctatgtggctcaactggctcaatttgttggttttaagagcgggttggtggggacgttt
ggtgtgggccccttggataagttgtctgagtcaaaacaaacaacgccagatctgttgtct
atgcaccttattttgatggcaatggcggactcgggtgtggattttgtcgcttttgaagcc
tcttctcatgctttggatcaggggcgtcttgaaggggtgccctttcagacggcggtgttt
tcaaacctttcccgcgatcaccttgattatcatggtgatatgaattcatatgctctggcc
aagcagcgattgttttcgtttcccagtgtgacgcattccgtattttgtttggatgatgct
tatgcaggtttcatggctgaaagcgctgttgattcacgccactattattatagtgagcaa
aactcaaaggccgatttttatgttaagcagttagcgctggagtcagcaggatgccgattt
gttctgtgtcatccagacggtgaagtgccagtgtttttgcccttattgggtcgattcaac
gtgcaaaacgcattggctgcgttggccagtctttgggcttatgttgatgacaaacagcgt
ttgattgcgggtttgtcctgcttgtctggcgcgcctggtcgaatggaaaaagtccattta
cctcattcaccacttgttgtggtggattatgctcatactcccgatgcgctagcagtggcg
ttacaggccttgaaggcgcattccagtagtcgattgatttgtgtatttggttgtggtggt
gatagggatagaggcaagcgacctttaatgatggcggcagctatgcaaaatgctgattgc
gtatggttaacatctgataatcctcgcactgagtcgatagagcaaattttttccgatatt
ttagcgcaaaccaatcaaggtgaggcgtttagttttgagcctgatcgtcgcgttgcgata
cgtcaagctatcttgtcggctggcccaaatgatgtggttttgattgctggtaaagggcat
gagacttatcaagatattgaaggtattaagcatcattttgatgataaagaagaggcgttg
aaggcggtagaagcttatgttaattga
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