Maribacter sp. MJ134: EJ994_03775
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Entry
EJ994_03775 CDS
T05877
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mare
Maribacter sp. MJ134
Pathway
mare03030
DNA replication
mare03410
Base excision repair
mare03420
Nucleotide excision repair
mare03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ994_03775 (ligA)
03410 Base excision repair
EJ994_03775 (ligA)
03420 Nucleotide excision repair
EJ994_03775 (ligA)
03430 Mismatch repair
EJ994_03775 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mare03032
]
EJ994_03775 (ligA)
03400 DNA repair and recombination proteins [BR:
mare03400
]
EJ994_03775 (ligA)
Enzymes [BR:
mare01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EJ994_03775 (ligA)
DNA replication proteins [BR:
mare03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EJ994_03775 (ligA)
DNA repair and recombination proteins [BR:
mare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EJ994_03775 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJ994_03775 (ligA)
MMR (mismatch excision repair)
DNA ligase
EJ994_03775 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EJ994_03775 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Auto_anti-p27
RNA_lig_T4_1
HHH
RNA_ligase
EcoRI
AphA_like
Motif
Other DBs
NCBI-ProteinID:
AZQ57964
UniProt:
A0A3Q9FHY2
LinkDB
All DBs
Position
877325..879319
Genome browser
AA seq
664 aa
AA seq
DB search
MSIERTINALREELRGHNYNYYVLDSPTITDFDFDMKLKELQRLEAAHPEFYDESSPTIR
VGGMVTKNFETIVHEHRMYSLDNSYSKDDLEDWEKRIQRNLGDVPVAYTCELKYDGASIS
ITYEDGKLVRAVTRGDGFQGDDVTTNIKTIKSVPLQLKGDYPPKFDIRGEIVLPFDGFQK
MNEERVANGEEPYMNPRNTASGSLKLQDSALVAQRPLECLLYSIVGNNTGISSQFEMLEK
ARAWGFKVPTVAKLCQSTAEVMEFVEEWDVKRHSLPYETDGVVVKVNSLQHQEELGYTAK
APRWAMAYKFKAEQVFTVLNEITYQVGRTGAITPVANLAPVLLAGTTVKRASLHNADQIE
KLDIREGDTVFVEKGGEIIPKIIAVDLTKRPAHSVPTEYISHCPECHTPLERTEGDAKHY
CPNEYGCPPQITGRIQHFISRKAMDIEGLGGETVELLFKEGLIKDYADLYDLTKEEILPL
ERMAEKSADNLIKGVAESVSIPFERVMFALGIRYVGETVAKKLAKAYKNIDALSSATQEE
LVAVDEIGERIAESVVAFFSNEKNLQAIARLKAKGVQFELSAEKLENQTEILKGKTVVVS
GVFETVSRDELKKLIEDNGGKVGSSISSKTSYLVAGDKMGPSKRTKAENLGVPIITEQEF
LEML
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgaacgtacgattaacgcgctgcgcgaggaacttagaggacataattacaat
tattatgtacttgatagtccaacgattacggactttgattttgatatgaaattgaaggag
ctacagcgtttggaggcagcgcatccagaattctatgatgaaagttccccgacaatccgg
gtgggtggtatggtcaccaagaactttgagaccattgtacacgagcatcgcatgtattcc
ttggacaattcgtactccaaggatgatttagaggattgggaaaaacggattcaacgtaac
ctgggcgatgttcccgtggcctacacctgtgagttgaaatacgatggcgcatctatcagc
atcacctatgaggacggaaaattggtacgtgccgtaacgcgtggagatggctttcagggc
gatgatgtcacgacgaatatcaaaacgataaaatcggttcccttgcaactaaaaggtgat
tatccaccaaagttcgatatccgtggagagattgtactgccctttgacggttttcagaaa
atgaacgaagaacgtgttgccaatggggaagaaccctatatgaatcctagaaataccgct
tcgggaagtttaaaattacaggatagtgccttggtggcgcaacgtcccttagagtgtttg
ctgtacagcatcgttgggaataatacgggaatcagttcgcaatttgagatgttggaaaag
gcccgtgcttgggggtttaaggtgcctacagtggccaaattatgccaaagtacggcagaa
gtcatggaatttgtggaggagtgggatgtgaaacggcacagcttgccctatgagaccgat
ggcgtggtagtcaaggtaaatagcctacagcaccaagaggaactcggatacacggccaaa
gcgccacgttgggccatggcctataaattcaaggcagagcaggtgtttaccgtgctcaat
gaaattacctatcaggtagggcgcacaggggccattacccccgtggccaatctagcacct
gtactgttggcaggtaccacggtaaaaagggcttcgcttcataatgccgaccaaattgaa
aaattggatatccgtgagggcgataccgtttttgtggaaaaaggaggggagattatccct
aagataatagcggtagaccttaccaaaagaccggctcattctgtacctacggagtatatt
tcccactgtccggaatgtcatacccctttggaacgtaccgaaggcgacgccaagcattac
tgccccaacgagtatggttgtccgccacagattacgggacgcatacagcattttatttcg
cgcaaggccatggatattgaaggtctggggggcgaaactgtagaattgttgttcaaagaa
ggcttgattaaagattatgccgatttgtacgacttgaccaaagaagaaatcttgcccttg
gagcgtatggcagaaaaatccgctgacaatctcattaaaggcgtggcggaatcggttagc
attccctttgagcgggtcatgttcgctttgggaattagatacgtgggtgaaaccgtagct
aaaaaactggccaaggcctataaaaatattgatgccctttctagcgctacccaagaagaa
ttggtggctgtggacgaaattggggagcgtattgcagagagcgttgttgcctttttcagt
aacgaaaagaacttacaggctattgcccgtctaaaggccaaaggtgtgcagtttgaactc
tcggcggagaaactggaaaatcagaccgaaatcctaaaagggaaaacagtggtggtttcc
ggtgtttttgagacggtcagtagagacgagcttaaaaaactgattgaggataatgggggc
aaggtagggtcgtccatatcttccaagaccagctacttggtcgccggggataaaatggga
cccagtaaaagaacaaaggccgaaaacctgggagtgcccatcatcacggaacaggagttt
ttggaaatgctatag
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