Marinobacter sp. JH2: MARI_28680
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Entry
MARI_28680 CDS
T06162
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
marj
Marinobacter sp. JH2
Pathway
marj00270
Cysteine and methionine metabolism
marj00450
Selenocompound metabolism
marj01100
Metabolic pathways
marj01110
Biosynthesis of secondary metabolites
marj01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
marj00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MARI_28680 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MARI_28680 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
marj01007
]
MARI_28680 (patB)
Enzymes [BR:
marj01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
MARI_28680 (patB)
Amino acid related enzymes [BR:
marj01007
]
Aminotransferase (transaminase)
Class II
MARI_28680 (patB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QBM18726
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Position
3133258..3134433
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AA seq
391 aa
AA seq
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MDFDQPIQRENTASVKFDVRKAVFGRDDVIPVWVADMDFAAPEAVTAALKARAEHPVYGY
TIFPDSLYQSIIDWFAERHNWQIEKEWILMAPGVVPSLHAACMAYAAPGEGVIIQPPVYP
PFFSSVQQSGRVVIENPLVQDAETGQYRMDLEHLEQCAARPDARILMFCSPHNPVGRVWT
EDELKAVLDIARRHQLLVLTDEIHCDLVYPDKPAHTMLARLSGESDVLVTAIAPSKSFNM
PGLGLSALVIPDAERRGAIKAVFDSLHVPQCNPFSVTGFEAGYQQGGEWLDQLMVYLQAN
RDYVLEQVATRWPGIRVSAPEGTYLMWLDCRELGLDDAGLKRFFVQQAGVGMNPGITFGE
PGSGFMRLNIGCPRAVLEQVMARVESALAQW
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaccagccgatacaacgagaaaacaccgcctcggtgaaatttgatgtgcgt
aaggcggtgttcggccgtgacgatgtgattccggtgtgggtcgcggatatggattttgct
gcgcccgaggcggtaaccgccgctttgaaggctcgggctgagcatccagtgtacgggtat
acgatttttccggacagcctttaccaatccatcattgattggtttgccgaacgtcacaat
tggcagatcgagaaagaatggattctgatggcaccgggtgtggtgccatcgttgcatgct
gcttgcatggcttatgctgcgcccggcgaaggggtgatcatccagccgccggtgtaccct
ccgttctttagttccgtgcagcagagtggccgggtggtgatcgaaaacccattggtgcag
gatgcggaaaccggccaataccgcatggatctggagcaccttgagcaatgcgccgcccgg
ccggacgcgcgcattctgatgttttgttcacctcataacccggtgggccgggtgtggacc
gaagacgagttaaaagcggttcttgatatcgcccgccggcatcaactgttggttctgacc
gacgagattcactgcgatttggtgtatccggacaagcccgctcacaccatgctggcccgg
ctgtcgggtgagagcgatgtgctggtcacggccattgcgccgagcaaaagtttcaacatg
cccggtttgggtctatcggcgttggtgattccagatgctgaacgccgcggggccataaaa
gcggtgtttgattctttgcatgtgcctcagtgtaaccccttcagcgtgacgggctttgaa
gccggttaccaacagggaggtgaatggctggatcagctgatggtgtatctgcaggctaat
cgggactacgtgctggaacaggttgctacgcgctggcccggtattcgggtgtcagcgccg
gaaggtacttatctgatgtggctagattgtcgcgagttggggctggacgatgccgggttg
aaacgtttctttgtgcaacaggcgggcgtgggcatgaacccaggcatcacctttggcgag
ccaggtagcggctttatgaggctcaatattggttgccctcgagccgtattagaacaggta
atggcccgtgtggagtcggccctggcgcagtggtaa
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