KEGG   Maribacter hydrothermalis: BTR34_18435
Entry
BTR34_18435       CDS       T04597                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mart  Maribacter hydrothermalis
Pathway
mart03030  DNA replication
mart03410  Base excision repair
mart03420  Nucleotide excision repair
mart03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mart00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BTR34_18435
   03410 Base excision repair
    BTR34_18435
   03420 Nucleotide excision repair
    BTR34_18435
   03430 Mismatch repair
    BTR34_18435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mart03032]
    BTR34_18435
   03400 DNA repair and recombination proteins [BR:mart03400]
    BTR34_18435
Enzymes [BR:mart01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BTR34_18435
DNA replication proteins [BR:mart03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BTR34_18435
DNA repair and recombination proteins [BR:mart03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BTR34_18435
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BTR34_18435
   MMR (mismatch excision repair)
    DNA ligase
     BTR34_18435
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BTR34_18435
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT BRCT_2 HHH HNOB Zn_Ribbon_TF RNA_ligase RNA_lig_T4_1
Other DBs
NCBI-ProteinID: APQ19178
UniProt: A0A1B7Z7X4
LinkDB
Position
complement(4263343..4265334)
AA seq 663 aa
MKSKIEALRKELREHNHNYYVLDNPTISDYDFDMKLKELQELEAKHPEFYDASSPSLRVG
GMITKNFATVVHEHRMYSLDNSYSKEDLEDWEKRIQRNLGDVPVAFTCELKYDGASISIT
YEQGKLVKAVTRGDGIQGDDVTNNIKTIKSVPLQLKGDYPDKFDIRGEIVLPFDGFIKMN
EERIANGEEPYMNPRNTASGSLKLQDSSMVAQRPLDCLLYSIVGRNLNIDSQYHMLEKAR
EWGFKVPTVAKLCQTTDEVMAFVEEWDVKRHELPYETDGVVIKVNSLQNQEELGFTAKAP
RWAMAYKFKAEQVFTTLNEITYQVGRTGAITPVANLEPVLLAGTTVKRASLHNADQIAKL
DIRVGDTVFVEKGGEIIPKIIAVDLSKRPTGSEPTEYIHQCPECGTELTRTEGDAKHYCP
NEYGCPPQITGRIQHFISRKAMDIEGLGGETVELLFKEGLIDDYADLYKLTKEDVLPLER
MAEKSAENLVKGVSESVQVPFERVLFALGIRFVGETVAKKLAKAYKNIDALKEATLEHLT
SVDEIGERIAQSVIDFFANKRNIDAIERLRSYGVQLEISAEKLQNQTDMLSGKTFVVSGV
FEILSRDELKKKIEDNGGKVGSSISSKTSFLVAGDKMGPSKRTKAESLEIPIISEQDFIN
MLG
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaaatcaaaaatagaagcactaagaaaagaattacgcgagcataatcataattactac
gtgttggataacccgaccatttctgattatgattttgatatgaaattgaaagaattacag
gagttggaagcaaagcatccagaattctatgatgccagttcaccgtctttgcgagttggt
ggcatgattaccaaaaattttgcaacggtagttcatgaacacagaatgtattccttggat
aattcgtactctaaagaagatttagaagattgggagaaacgtattcagcgtaatttaggt
gatgtgcctgtagcttttacgtgcgagttaaaatatgacggtgcatctatcagcattact
tatgaacaagggaaattggtaaaagcagttacacgaggagacggaatacaaggagatgat
gtcacaaataatattaaaaccattaagtcggttccacttcaactaaagggagattacccg
gataagtttgatattcgtggagaaattgtattgccgtttgacggattcataaaaatgaat
gaagaacggattgccaatggcgaagagccctatatgaacccaagaaatacagcgtcaggt
agtttaaaacttcaggatagtagtatggtggcgcaaagacctttagattgtttattgtac
agtattgttggtagaaacctgaatatcgactctcaatatcatatgttggaaaaagcccgt
gaatggggttttaaagtgccaacagtagcaaagctttgccagaccacagatgaagttatg
gcatttgtagaagagtgggacgtaaaacgccatgaattgccttatgagacggacggagta
gtaataaaagtaaatagtcttcagaatcaagaagaattaggatttaccgccaaagcgcct
agatgggcaatggcatataagtttaaggcggagcaagtttttactacgcttaatgaaatt
acatatcaagttgggcgtacaggggcaataactcccgtggcaaatttagagcctgtgtta
ttagcgggtacaacggtaaagagagcatcgctacataatgcggaccaaatagctaaactt
gatattagagttggtgacactgtttttgtagaaaaaggaggagaaatcattccgaagatt
atagccgttgatttatccaaaagaccaacaggttcagaaccaacggagtacatacatcag
tgtcccgaatgtggaacagagcttactagaacagaaggtgatgccaaacattattgccct
aacgaatatggttgtccgccacagataacagggcgtatacagcattttatatcgagaaag
gcaatggatatagaaggattgggtggtgagacggtagagctgctatttaaagaaggttta
atagatgattatgccgatttgtataaactcactaaagaagatgtgttgcctttggaacgt
atggctgagaagtctgccgagaatttagtaaaaggagtatcagaatcggtacaagtacct
tttgagcgtgtattgtttgcgttgggtattcgctttgtaggggagacggtagcaaagaaa
ttggcaaaggcgtataagaatatagatgccttgaaagaagctacgttagagcacttaaca
tcggtagatgaaataggggagcgtatagcacaaagcgtaatcgacttttttgcaaacaaa
aggaatattgatgctattgaaagattacgtagctacggagtgcaattagaaatatctgca
gagaaattacaaaaccagaccgatatgctttcgggtaaaacctttgtggtttctggtgtg
ttcgagattttgagtagagacgagcttaaaaagaaaatcgaagataatggcggcaaggtt
ggttcttcgatatcttcaaaaacttcttttttagttgcaggtgataaaatgggaccaagt
aagcgtaccaaggcggagagcttagaaattcctattattagtgagcaagattttataaat
atgttaggataa

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