Maribacter hydrothermalis: BTR34_18435
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Entry
BTR34_18435 CDS
T04597
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mart
Maribacter hydrothermalis
Pathway
mart03030
DNA replication
mart03410
Base excision repair
mart03420
Nucleotide excision repair
mart03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTR34_18435
03410 Base excision repair
BTR34_18435
03420 Nucleotide excision repair
BTR34_18435
03430 Mismatch repair
BTR34_18435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mart03032
]
BTR34_18435
03400 DNA repair and recombination proteins [BR:
mart03400
]
BTR34_18435
Enzymes [BR:
mart01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BTR34_18435
DNA replication proteins [BR:
mart03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BTR34_18435
DNA repair and recombination proteins [BR:
mart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BTR34_18435
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTR34_18435
MMR (mismatch excision repair)
DNA ligase
BTR34_18435
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BTR34_18435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
BRCT_2
HHH
HNOB
Zn_Ribbon_TF
RNA_ligase
RNA_lig_T4_1
Motif
Other DBs
NCBI-ProteinID:
APQ19178
UniProt:
A0A1B7Z7X4
LinkDB
All DBs
Position
complement(4263343..4265334)
Genome browser
AA seq
663 aa
AA seq
DB search
MKSKIEALRKELREHNHNYYVLDNPTISDYDFDMKLKELQELEAKHPEFYDASSPSLRVG
GMITKNFATVVHEHRMYSLDNSYSKEDLEDWEKRIQRNLGDVPVAFTCELKYDGASISIT
YEQGKLVKAVTRGDGIQGDDVTNNIKTIKSVPLQLKGDYPDKFDIRGEIVLPFDGFIKMN
EERIANGEEPYMNPRNTASGSLKLQDSSMVAQRPLDCLLYSIVGRNLNIDSQYHMLEKAR
EWGFKVPTVAKLCQTTDEVMAFVEEWDVKRHELPYETDGVVIKVNSLQNQEELGFTAKAP
RWAMAYKFKAEQVFTTLNEITYQVGRTGAITPVANLEPVLLAGTTVKRASLHNADQIAKL
DIRVGDTVFVEKGGEIIPKIIAVDLSKRPTGSEPTEYIHQCPECGTELTRTEGDAKHYCP
NEYGCPPQITGRIQHFISRKAMDIEGLGGETVELLFKEGLIDDYADLYKLTKEDVLPLER
MAEKSAENLVKGVSESVQVPFERVLFALGIRFVGETVAKKLAKAYKNIDALKEATLEHLT
SVDEIGERIAQSVIDFFANKRNIDAIERLRSYGVQLEISAEKLQNQTDMLSGKTFVVSGV
FEILSRDELKKKIEDNGGKVGSSISSKTSFLVAGDKMGPSKRTKAESLEIPIISEQDFIN
MLG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaaatagaagcactaagaaaagaattacgcgagcataatcataattactac
gtgttggataacccgaccatttctgattatgattttgatatgaaattgaaagaattacag
gagttggaagcaaagcatccagaattctatgatgccagttcaccgtctttgcgagttggt
ggcatgattaccaaaaattttgcaacggtagttcatgaacacagaatgtattccttggat
aattcgtactctaaagaagatttagaagattgggagaaacgtattcagcgtaatttaggt
gatgtgcctgtagcttttacgtgcgagttaaaatatgacggtgcatctatcagcattact
tatgaacaagggaaattggtaaaagcagttacacgaggagacggaatacaaggagatgat
gtcacaaataatattaaaaccattaagtcggttccacttcaactaaagggagattacccg
gataagtttgatattcgtggagaaattgtattgccgtttgacggattcataaaaatgaat
gaagaacggattgccaatggcgaagagccctatatgaacccaagaaatacagcgtcaggt
agtttaaaacttcaggatagtagtatggtggcgcaaagacctttagattgtttattgtac
agtattgttggtagaaacctgaatatcgactctcaatatcatatgttggaaaaagcccgt
gaatggggttttaaagtgccaacagtagcaaagctttgccagaccacagatgaagttatg
gcatttgtagaagagtgggacgtaaaacgccatgaattgccttatgagacggacggagta
gtaataaaagtaaatagtcttcagaatcaagaagaattaggatttaccgccaaagcgcct
agatgggcaatggcatataagtttaaggcggagcaagtttttactacgcttaatgaaatt
acatatcaagttgggcgtacaggggcaataactcccgtggcaaatttagagcctgtgtta
ttagcgggtacaacggtaaagagagcatcgctacataatgcggaccaaatagctaaactt
gatattagagttggtgacactgtttttgtagaaaaaggaggagaaatcattccgaagatt
atagccgttgatttatccaaaagaccaacaggttcagaaccaacggagtacatacatcag
tgtcccgaatgtggaacagagcttactagaacagaaggtgatgccaaacattattgccct
aacgaatatggttgtccgccacagataacagggcgtatacagcattttatatcgagaaag
gcaatggatatagaaggattgggtggtgagacggtagagctgctatttaaagaaggttta
atagatgattatgccgatttgtataaactcactaaagaagatgtgttgcctttggaacgt
atggctgagaagtctgccgagaatttagtaaaaggagtatcagaatcggtacaagtacct
tttgagcgtgtattgtttgcgttgggtattcgctttgtaggggagacggtagcaaagaaa
ttggcaaaggcgtataagaatatagatgccttgaaagaagctacgttagagcacttaaca
tcggtagatgaaataggggagcgtatagcacaaagcgtaatcgacttttttgcaaacaaa
aggaatattgatgctattgaaagattacgtagctacggagtgcaattagaaatatctgca
gagaaattacaaaaccagaccgatatgctttcgggtaaaacctttgtggtttctggtgtg
ttcgagattttgagtagagacgagcttaaaaagaaaatcgaagataatggcggcaaggtt
ggttcttcgatatcttcaaaaacttcttttttagttgcaggtgataaaatgggaccaagt
aagcgtaccaaggcggagagcttagaaattcctattattagtgagcaagattttataaat
atgttaggataa
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