Palleronia sp. THAF1: FIU81_03960
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Entry
FIU81_03960 CDS
T06247
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
maru
Palleronia sp. THAF1
Pathway
maru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU81_03960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maru03400
]
FIU81_03960 (nth)
Enzymes [BR:
maru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU81_03960 (nth)
DNA repair and recombination proteins [BR:
maru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU81_03960 (nth)
Prokaryotic type
FIU81_03960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QFU07824
UniProt:
A0A5P9JD53
LinkDB
All DBs
Position
770846..771490
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AA seq
214 aa
AA seq
DB search
MAKPLPYQLQSQIFARFQAAEAVPQGELDHVNAYTLVVAVALSAQATDAGVNKATKDLFA
KVTTPQQMLDLGEEGLIEHIKSIGLYRNKAKNVIKLSRILVEEHGGEVPSSRAALEALPG
VGRKTANVVLNMWWGHPAQAVDTHIFRIGNRTRIAPGKDVVAVERAIEDNVPAEYQLHAH
HWLILHGRYTCVARKPKCPACLIRDLCPYEEKTE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccgcttccctatcagctgcaatcgcagatattcgcccgctttcaggctgcc
gaagccgtaccccagggcgaactggatcacgtgaacgcctacacgctggtcgtcgccgtt
gccctttccgcgcaggcgaccgatgcgggcgtgaacaaggcaacgaaagacctgtttgcc
aaggtcaccacgccccagcagatgctggacctcggggaagagggactgatcgagcacatc
aagtccattggcctgtaccgcaacaaggcgaagaacgtcatcaagctcagccgcatcctc
gtggaagaacacggcggcgaagtgccatcgtcgcgtgccgcgctggaagcgttaccgggc
gtcgggcgcaagaccgcgaacgtcgtgctgaacatgtggtggggccatcccgcgcaggct
gtggacacacatatcttccgcatcggcaatcgcacgcggatcgcgcccggcaaggatgtc
gtcgcggtcgagcgggcgattgaggacaacgtgcccgccgaataccagcttcacgcgcac
cactggctgatcctgcacggacgctatacctgcgtggcgcgtaaacccaaatgcccggcc
tgcctgatccgggatctatgcccctacgaggagaagaccgaatga
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