Mycolicibacterium arabiense: MARA_19680
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Entry
MARA_19680 CDS
T07049
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
marz
Mycolicibacterium arabiense
Pathway
marz03030
DNA replication
marz03410
Base excision repair
marz03420
Nucleotide excision repair
marz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
marz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARA_19680 (ligA)
03410 Base excision repair
MARA_19680 (ligA)
03420 Nucleotide excision repair
MARA_19680 (ligA)
03430 Mismatch repair
MARA_19680 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
marz03032
]
MARA_19680 (ligA)
03400 DNA repair and recombination proteins [BR:
marz03400
]
MARA_19680 (ligA)
Enzymes [BR:
marz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MARA_19680 (ligA)
DNA replication proteins [BR:
marz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MARA_19680 (ligA)
DNA repair and recombination proteins [BR:
marz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MARA_19680 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MARA_19680 (ligA)
MMR (mismatch excision repair)
DNA ligase
MARA_19680 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MARA_19680 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
HHH
Motif
Other DBs
NCBI-ProteinID:
BBY48500
UniProt:
A0A7I7RWC4
LinkDB
All DBs
Position
complement(1599613..1601730)
Genome browser
AA seq
705 aa
AA seq
DB search
MNAEPETPADPVAPDVRRAWQELAEEVRGHQFRYYVKDAPVISDGEFDALLGRLNAMEEE
HPELRVPDSPTQLVGGAGFATEFAPADHLERMLSLDNVFNSEELSAWAARLTSEVGDDPE
FLCELKIDGVALALVYRDGKLERAATRGDGRTGEDVTLNARTIDDVPERLTHNDEYPVPR
VLEVRGEVFFRVADFEELNAGLVAEGKAPFANPRNSAAGSLRQKNPAITARRRLHMICHG
LGRTEGFTPTTLHDAYLALKAWGLPVSTHATRVKGVAAAAEQVTYWGEHRHDVEHEIDGL
VVKVDDVSLQRRLGATSRAPRWAIAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVK
VAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDARDGSEREFVMPTE
CPECGTTLAPAKEGDADIRCPNARTCPAQLRERVFHVAGRGAFDIEGLGYEAGIALLQAG
AITDEGDLFTLTEDDLLRTQLFTTQKGELSANGKRLLANLGKAKQQALWRVLVALSIRHV
GPTAARALASEFGSLEAIEAASEQQLASSEGVGPTIAAAVVEWFTVDWHRAIVDKWRAAG
VRMADERDASIERTLDGMSIVVTGSLTGFSRDEAKEAILARGGKAAGSVSKKTAYVVAGD
APGSKYDKAIELGVPVLDEDGFRRLLDNGPEPTAEPEPDSEPEDA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgagcccgaaacgcccgccgatcccgtcgcaccggacgtccggcgcgcgtgg
caggaactggccgaggaagtgcgaggccatcagttccgctactacgtcaaggacgcgccc
gtcatctccgacggcgagttcgacgcgctgctcggccggctcaacgcgatggaggaggaa
caccccgagctgcgtgtgccggactcgccgacgcagttggtcggcggtgcgggcttcgcc
accgagttcgcccccgcggaccacctcgagcggatgctcagcctggacaacgtgttcaac
tccgaggaactcagcgcctgggccgcgcggctgaccagcgaggtgggcgacgacccggag
ttcttgtgcgaactgaagatcgacggcgtcgcactcgcgctggtctaccgcgacggcaag
ctggaacgggcggccacccgcggcgacggccgcaccggcgaggacgtcacgctgaacgcc
cgcaccatcgacgacgtgcccgagaggctcacgcacaacgatgaatacccggtgcccagg
gtgctcgaggtgcgcggcgaggtgttcttccgggtcgccgacttcgaggaactcaacgcc
ggactggtcgccgagggcaaggcgccgttcgccaacccgcgcaacagcgcggcgggatcg
ctgcggcagaagaacccggccatcaccgcccgcaggcggctgcacatgatctgtcacggc
ctcggccgcaccgaggggttcacgcccacgacgctgcacgatgcgtacctcgcgctgaag
gcgtggggattgccggtctcgacccacgccacccgcgtcaagggcgtcgccgcggccgcc
gagcaggtgacctactggggcgagcaccgccacgacgtcgagcacgagatcgacggcctc
gtcgtcaaggtcgacgacgtgtcactgcaacggcggctcggcgccacgtcgcgggcaccc
cggtgggcgatcgcgtacaagtacccaccggaggaggccacgaccaagctcctcgacatc
cgggtcaacgtcgggcgcaccgggcgggtcaccccgttcgcgtacatggaaccggtgaag
gtggccggttcgacggtcgggttggcgacgctgcacaacgcctcggaggtcaagcgcaag
ggcgtgctgatcggcgacaccgtcgtgatccgcaaggcaggcgacgtgattcccgaggtg
ctcggcccggtcgtcgacgcgcgcgacggctccgagcgcgagttcgtgatgcccaccgag
tgcccggagtgcggcaccacgctggcgcccgccaaggagggcgacgccgacatccgctgc
cccaacgcccgaacctgcccagcgcagttgcgagagcgcgtgttccacgtcgccggccgc
ggtgcgttcgacatcgagggactgggctacgaggcgggcatcgccctgctgcaggcaggc
gcgatcaccgacgagggcgacctgttcaccctcaccgaggacgacctgctgcgcacgcag
ctcttcaccacccagaagggagagctgtcggccaacggcaagcggctgctggccaacctg
ggcaaggccaagcagcaggcgctgtggcgcgtgctggtggcgctgtcgatccggcacgtc
gggcccaccgccgcgcgggcgctggcgagcgagttcggcagcctcgaggcgatcgaggcc
gcctccgagcagcagctggcgtcgtccgaaggcgtggggccaacgatcgccgcggcggtc
gtcgagtggttcaccgtcgactggcatcgcgcgatcgtcgacaagtggcgcgccgcgggc
gtgcgcatggccgacgaacgggacgcctcgatcgaacgcacgttggacggaatgtcgatc
gtggtcaccggatcgctgaccggcttctccagggacgaggccaaggaggcgatcctcgcg
cgcggcggcaaggcagcggggtcggtgtcgaagaagacggcctacgtcgtcgcaggcgac
gccccgggctcgaagtacgacaaggcaatcgaattgggcgtgccggtgctcgacgaggac
gggttccggcgactgctggacaacggcccggaacccacggccgagccggagccggactca
gaacccgaagacgcctag
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