Mahella australiensis: Mahau_1719
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Entry
Mahau_1719 CDS
T01494
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mas
Mahella australiensis
Pathway
mas03030
DNA replication
mas03410
Base excision repair
mas03420
Nucleotide excision repair
mas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mahau_1719
03410 Base excision repair
Mahau_1719
03420 Nucleotide excision repair
Mahau_1719
03430 Mismatch repair
Mahau_1719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mas03032
]
Mahau_1719
03400 DNA repair and recombination proteins [BR:
mas03400
]
Mahau_1719
Enzymes [BR:
mas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mahau_1719
DNA replication proteins [BR:
mas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mahau_1719
DNA repair and recombination proteins [BR:
mas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mahau_1719
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mahau_1719
MMR (mismatch excision repair)
DNA ligase
Mahau_1719
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mahau_1719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
RUBY_RBDX
BRCT_2
HHH_8
Fer2_3
Mustang
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AEE96900
UniProt:
F4A066
LinkDB
All DBs
Position
complement(1810435..1812432)
Genome browser
AA seq
665 aa
AA seq
DB search
MAVTEDVIQRVNELRQIIEHHNYMYYVLDSPEISDAEYDALMRELEQLESKYPEIITPDS
PTQRVGGQVSGQFQPVVHSVPLLSLNDVFSESEIRDFDRRVRAALNEDVQYVLEVKIDGL
SVALTYQDGLFIRGATRGDGFVGEDVTANLRTIRSIPLRLKMPINVEVRGEVFMPKKYFY
KLNEQREKDGLPLFANPRNAAAGSVRQLDPAITAQRHLDIFVFNLQRIEGYAFETHVESL
MFLKEQGFKIMPYLIPCDTIDEAIEQCRLWEGKRYELPYEIDGLVIKVNSLRQREILGNT
SKTPRWAVAYKFPAERKESIIKHIVVQVGRTGVLTPTAVLEPVRLAGTTVSRATLHNEDY
IKEKDIRIGDHVLVQKAGDIIPEVVSVIKEKRTGDERIFEMPDKCPVCGADAVRIDGEAA
RRCTGVSCPAQVERGLIHFASRDAMDIEGLGPAVVRQLLNKKLIRDEADIYYLKYEDLVK
LERMGPKSAQNLINAIQASKDRGLARLLYALGIPLVGTRAASILAERFGDIYELMKADQA
QLTAIPEIGPKIAESVVTFFKQEQTKDLIKRLETAGVRLTADKKQKGNAPLAGLTFVLTG
TLSKYTREQATEIIEGLGGKVTGSVSKKTDYVIAGDGPGSKLDKALQLGVKVIDENEFEW
LIGQE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgttacagaagatgtaatacaacgcgtgaatgaactgaggcagattatagaacat
cataattatatgtattatgtactcgatagtcccgaaatatctgatgccgaatacgatgcc
ctgatgcgcgaattggagcaactggagtccaaatatccagagattataacacctgattca
cctacacagagggtaggtggtcaggtgtccggccaattccagccggtagttcatagcgtg
ccactgctcagcttgaacgatgtattttccgaaagtgagatcagagactttgacaggcga
gtgcgtgcagcgctaaatgaggacgtacagtacgtgctggaggtcaaaatagacggccta
tcggtagcgcttacatatcaggacggtctgtttatccgcggtgctacgcgcggtgatgga
tttgtcggagaggatgttacagccaatttaaggacgatacgttcgataccgttgcgcctg
aagatgcccataaatgtagaagtccgcggcgaagtctttatgcctaagaagtacttctac
aaacttaatgagcagagagaaaaggatggcttacccctattcgccaatccgcgcaacgcc
gcagccggttcggtacgccaactcgacccggctattacggcacagcgccatcttgacata
tttgtattcaacctgcagcgtatagagggatatgcctttgagacacatgtcgaaagcctg
atgtttctcaaagaacaaggatttaagatcatgccgtacctaataccgtgcgataccata
gatgaggccatagaacaatgccgtttatgggagggcaagcggtatgagctgccatatgag
atcgatggtcttgtgataaaggtgaacagcttgcgccaacgagagatactgggtaacaca
tccaagacaccgcgctgggcagtagcttataaatttccggctgagcgcaaggagtcgatt
ataaagcatatagtcgtgcaggtcggacgaacgggtgtgcttacgccgacagccgtattg
gagccggtcagactagctggcaccaccgtttccagagccacgctgcataacgaagattat
ataaaagaaaaggacatacgcataggcgatcatgtgcttgtgcaaaaggccggcgatatc
attcccgaagtggtatcggttataaaagagaagcgtaccggtgacgagcgtatatttgaa
atgcccgacaaatgccctgtgtgcggtgccgatgcagtacgtatcgacggagaagcggcc
agaagatgcacaggagtgtcatgccctgcccaggtagagcgcgggcttatacactttgca
tcgcgcgacgctatggatatagagggacttggacctgctgttgtccggcagcttttgaat
aaaaaactcatacgcgatgaagccgatatatactatctgaagtatgaggatctcgtaaaa
ttggagcgcatggggcctaaatcagcccaaaatcttataaatgccatacaagccagcaag
gatagaggattggcgcgactactatacgctttgggtataccgctggttggcacaagagcc
gcatctatattggcggaacgatttggcgatatatatgagcttatgaaggctgaccaggca
cagcttactgccataccggagataggacctaagatcgccgagagcgttgtgacttttttt
aagcaggagcagaccaaagatctgataaagcgtttagaaacggccggcgtacgcttgacg
gccgataaaaagcaaaagggcaatgccccgttggccggccttacatttgtgttgactggt
acgctttccaaatatacgcgtgaacaggctaccgaaattatcgaaggcttgggaggtaag
gtaacaggcagcgtcagtaaaaaaaccgactatgttatagccggagatggtcccggcagc
aaattggataaggcgctccagctcggtgtgaaagtcatagatgaaaatgaattcgaatgg
ttgatcggtcaagaataa
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