Myxocyprinus asiaticus (Chinese sucker): 127411039
Help
Entry
127411039 CDS
T08782
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04620
Toll-like receptor signaling pathway
masi04621
NOD-like receptor signaling pathway
masi04622
RIG-I-like receptor signaling pathway
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127411039
04621 NOD-like receptor signaling pathway
127411039
04622 RIG-I-like receptor signaling pathway
127411039
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127411039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Crescentin
zf-C3HC4_2
Sina_ZnF
zf-RING_UBOX
ATG16
AAA_13
zf-TRAF_2
FapA
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
127411039
NCBI-ProteinID:
XP_051502323
LinkDB
All DBs
Position
20:complement(22764142..22786472)
Genome browser
AA seq
573 aa
AA seq
DB search
MSAGRNVEQQIPLQQRPPSLAMPSMAQRPRPEPGFLPVHGGFRDHFVTTPEPKYCCKSCR
LVLCNPRQTECGHRFCESCITDLLSKPNPVCPADFEPLFEDKIFRDVCCYREIMALQVYC
RSEKNGCKEQMSLQRVMMHLEVCPYFEVPCPMGKCKEKMMRKDMPEHLNRKCKHREITCE
FCNHKMALTELQKHKETICPAFPVACPNHCSFSSILRSELSSHQHDCPNAQVSCPFFRYG
CSYQGLNQEMREHEASFASEHLRLMTVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQYEEIREKNRQLEQKLLGMQKLMSAHSEKLLEVEMELRELRPLRAIREEVEALRVSME
SMRSIVSSLDSGRVGSSSGSPTLGFLEQQLSRHDDTLSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPISSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattcccctgcagcagcgtcctccctctctt
gccatgccctccatggcccagcggcccaggcccgagccaggcttcctgccagtgcatggc
ggcttcagggaccactttgtcacgacgcctgagcccaagtactgctgcaagtcctgcagg
ctagtgctgtgtaaccctcggcagactgaatgtggacatcgcttctgtgagagctgcatc
acagatctgcttagtaagcctaacccagtgtgtccagctgatttcgaaccactctttgaa
gataagatattccgggatgtttgctgctatagggaaattatggctcttcaagtctactgc
cggagtgagaaaaatggatgtaaagaacaaatgagtttgcaacgggtcatgatgcacttg
gaagtttgtccatactttgaggtgccttgccccatgggaaagtgtaaggagaagatgatg
aggaaagacatgcccgagcacttgaaccgcaaatgcaaacacagagagatcacctgtgaa
ttttgcaatcacaagatggccctcacggagttacagaaacacaaagaaaccatctgtcct
gcatttcctgtagcatgtcctaatcactgctccttttcttccattttaagaagcgagctg
tccagtcaccagcacgactgtccaaatgcccaggtgtcctgccccttctttcgctacgga
tgctcctaccaggggctgaatcaagagatgagggaacatgaggccagttttgcctctgag
cacctgagactgatgacagtcagaaacaccacactagaggccaaggtagaagatgttaag
agtgagctgatggagcgttataaggttctgcccagcctcagcagtcgtctggcggaggta
gaaacacaatatgaggagataagagaaaagaaccgacagctggaacagaagctactcggc
atgcagaaactgatgagtgctcactcagagaaactgctcgaggttgagatggagctacgg
gagcttcgtccactgcgagcgattagggaggaggtggaagctctcagagtgtcaatggag
agcatgcggtcaattgtatcatccctggactcgggccgtgtcggatccagttctggttcc
cccaccctgggcttcttagagcagcagctctcacgccacgatgacacattgagtgtacat
gatatccgcctggcagagatggacctgaagctgcaggtgctagagacggccagcttcaac
ggtacactcatttggaagatccgtgactacaagcggcggaaacaggaagccgtggcctcc
aaaaccctctcactctacagccaacccttctacacaggctacttcggctacaagatgtgc
gcccgcgtctatctaaatggggacggtatgggtaaaggcacacatctctccctcttcttt
gtggtcatgcgtggcgaatatgacgccttgttgccatggccattcaaacagaaagtaacg
ttgatgctaatggaccagggaccggcacggaaacacttaggtgatgccttcaaaccagac
cccattagcagtagctttcgccgacccactggtgagatgaacattgcctcaggctgtccg
ctctttgtggctcagactgtcctggagaacggaacctacatcaaagacgacaccattttc
atcaaggtgactgttgatacctctgacctgccagatccttga
DBGET
integrated database retrieval system
