Myxocyprinus asiaticus (Chinese sucker): 127414271
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Entry
127414271 CDS
T08782
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127414271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127414271
Membrane trafficking [BR:
masi04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127414271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
127414271
NCBI-ProteinID:
XP_051508150
LinkDB
All DBs
Position
23:complement(18173240..18194154)
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AA seq
462 aa
AA seq
DB search
MSAACPPQSPAVAKTEVLVEDWCPVLAATFAYWDNILGPRVRHIWAPKGQGLSLLCDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDSSFKYDTGLFVQGLLKDSTGSFMLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRCYMRAELSALWRAASEDDISPDNLINAQDSYTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcttgtcctccccagtcaccagccgtggctaagactgaagttctggttgag
gactggtgtccggtgctggctgcaaccttcgcctactgggacaacatcctgggcccccgt
gtacgacacatctgggccccgaaaggccaggggttgtcgctgctctgtgatggtgaagtc
acgtttctggccaatcacacgctgaatggtgagattttgcggagcgcggagagtggtgca
gtggatgtgaagttctttgttttagcagaaaagggagtcatcattgtctcgctgatcttc
gatggggaactcaagggcgacaaaaacacttgtgcactgtcaatcattctgccgcagtca
gagctaagcttctacctgcctctgcacagcgtgtgtgtggagagacttaaacacatcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctgttttgtcatctgag
attgttcccataatggagcttctcacctccatgaagaaacacagtgttccagaagaggtg
gatataaaggacactgtgctgaatgatgatgatataggagacagctgtcatgaagacttt
ttgcacaaggcaatcagctctcatcttcagacttgcggctgttccatggtggttggcagc
aatcccgagaaagtcaataagatcgtgctcacgctgtgtctcttcctcactcctgcggag
agaaagtgctctcgactgtgtcaccctgacagctcgtttaaatatgacacaggcctcttt
gttcagggcctcctcaaggactccacagggagctttatgttgccttatcggcaggtgctc
tactccccgtatcccaccactcacatcgatgtggacattaacacggtgaagcagatgccc
ccctgccatgagcacacatatcatcagcggtgttacatgcgggctgagctcagtgccctc
tggagggccgccagcgaggatgacatcagtccagacaacctcattaacgcccaggattcc
tacacccctgacttgaacatatttcaggacgtgatgcacaaagatacacttgtaaagtcc
ttcatagatgaggtgtttctgttgaaaccaggtctgtctctgcggagtgtgtacttgtcc
cacttccttctcctgctgcacagaaaggccctgacactgctcagatatattgaggatgag
acgcagaaggggaagaaacctttcagatctctacgcaatctaaaaactgatttggatttg
acggtggagggggacttgaacatcatcatggcgatggcagagaagctgcgggcaggcctt
cattcctttgtttttgggaagtctttcctcaccagtgtgcaggagcgtgacctcctcatg
agcttctga
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