Myxocyprinus asiaticus (Chinese sucker): 127416379 Help Entry 127416379         CDS       T08782                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism masi  Myxocyprinus asiaticus (Chinese sucker) Pathway masi04115   p53 signaling pathway masi04145   Phagosome masi04148   Efferocytosis masi04350   TGF-beta signaling pathway masi04510   Focal adhesion masi04512   ECM-receptor interaction masi04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:masi00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     127416379   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127416379  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     127416379    04148 Efferocytosis     127416379   09143 Cell growth and death    04115 p53 signaling pathway     127416379   09144 Cellular community - eukaryotes    04510 Focal adhesion     127416379   09142 Cell motility    04820 Cytoskeleton in muscle cells     127416379  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:masi04131]     127416379   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:masi00536]     127416379 Membrane trafficking [BR:masi04131]  Endocytosis   Phagocytosis    Opsonins     127416379 Glycosaminoglycan binding proteins [BR:masi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127416379 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 EGF cEGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  127416379 NCBI-ProteinID:  XP_051511665 LinkDB All DBs Position 25:18722905..18732767 Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWNCESARVAESPDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLVNFKQFKWTRGSLLTVEKNDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNSAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLASMFKELKGLGVVVQELSNELRKV MDEKNMLMNRIGIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSPCPINGGWGPWSPWDTCSTTCGGGVQSRKRLCNSPVPKYGGKDCVGDAKVTQ LCNKQACPIDGCLSNPCFNGAQCTSFPDGSWKCGKCPTGYTGNGIDCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPPRYTGSQQFGRGVEDAAAKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSEPMYRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDEVGDRCDNCPY NSNPDQTDTDSNGEGDACAVDIDGDGILNEKDNCPYLYNVDQKDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtctgcggcaatctttttgctactgatgctttggaactgcgagagcgcgagagtc gcagaaagtccagacgacaacagtgtgtacgacctgttcgagctcgtccaagtgccgagg aaaaaccatggggtcaccctggtaaaaggcgacgacccttacagtcccgcctacaagatc ctaaaccccgacctgatccccccggttcccgagagcgccttcagggacctaatcgattcc attcacgcggagagaggatttctactgctggtcaatttcaagcagttcaagtggacgagg ggaagcctcttgaccgtggagaagaatgacggctcaggacccgttttcgaaatcgtttcc aatggaaaagcaaacactctggacattgttttttccactgaaaacaagcaacaggttgtg tccattgaggaagcggatttggcggtgggacattggaagaacatcactcttttcgtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaattcagcggagcttgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcttgcggatcggcaag ggcgcagtgaaagacaggttcatgggagtgctgcaaaatgtgcgctttgttttcggaacg acactggatgcaattctgaggaataaaggatgccaaaactcaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatttacagatgatttgtggcttttcatgtgaggacctagccagcatgttc aaggaactcaaaggtcttggtgtggtggtgcaagagttgtccaacgaactccgcaaagtg atggatgaaaaaaacatgctcatgaatcgcataggcattcatgctggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagttgatgattgcacagagtgcact tgccagaattctgcaactgtgtgccgtaaaatttcatgtcccctaatcccatgtgcaaat gccacagtgcctgatggggagtgctgccctcgctgtggaaccccaagtgactccgctgag gacggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgtggccgctcctgtgaccgcataaataacaactgcgagggcacatcagtgcag acaagagactgttacctccaggagtgtgacaagcgctttaagcaagatggcagctggagt cattggtcaccctggtcatcctgctcagttacctgcggtgctggcgttatcacgcgcatt cgtctttgcaactcgccaacgccgcagatggagggaaaagattgccaaggtgaaggccgg cagactgagaggtgtgaaaaatcaccatgtccaatcaatggcggatggggaccatggtca ccttgggatacttgctctaccacctgtgggggtggtgtccaaagccgtaaacgtctttgc aatagtccagtacccaaatatggtggtaaagactgtgttggagacgcaaaggtcacccag ctctgcaacaagcaagcctgtccaatagatggatgtctttcgaatccatgctttaatgga gctcagtgcacaagcttcccagatggctcctggaaatgtgggaaatgccccacaggttac actggcaatggaattgattgcaaagatatcaatgagtgtaaggaggtccctgatgcttgc tttgaatttaatggagtccataggtgtgagaacacagtgcctggctacaactgtctgcca tgccccccacgctacactggctcacagcagtttggtagaggagttgaggacgctgctgcc aagaaacaggtgtgcacaccacgtaatccttgccttgatggaagccatgactgcaataag aatgctcgctgcaactatctgggacatttctcagagcccatgtaccgctgtgagtgcaaa cctggctttgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaatgcaacctatcactgcaagaaggacaactgtccc aaccttccaaactctgggcaagaagactatgacaaggatggaattggtgatgcttgtgat aatgatgatgacgatgatggcattcctgatgacagggacaattgcccactcatcttcaac ccaaggcagtatgactatgatcgtgatgaggtgggagaccgctgtgataactgtccctac aacagcaacccagaccagactgacactgacagcaatggtgaaggcgatgcctgtgctgtg gacattgatggagatggtattttaaatgagaaggacaactgcccatatctgtacaacgta gaccagaaagacactgatctagatggagttggtgaccagtgtgacaactgccctctggag cacaacccagaccagcttgactctgactctgaccgtgttggagacaaatgtgatagcaac caggacattgatgaggatggtcaccaaaacaacctagacaattgtccatacattgccaat gcgaaccaggctgatcatgacaaggatggtaaaggggacgcctgtgactatgatgatgat aatgatggcattcctgatgacaaggacaactgcagactggctttcaatccagatcaactg gattctgatggtgatggaagaggggatgcttgtaaagatgactttgaccaggataatgtc ccagatatctacgatgtctgtccagagaactttgacatcagtgagactgacttccggaaa tttcagatggtacctctggatcccaagggtacctctcagattgaccccaattgggtggtt cgtcatcaaggcaaggaacttgttcagacagtcaactgcgatcccggcattgctgttggt tttgatgagttcaattcagttgacttcagcggaactttcttcatcaacacggaaagagat gatgactatgctggctttgttttcggataccagtccagttctcgcttttacgtggtgatg tggaagcagatcacacagacctactggtccagcacaccaacaaaagcacagggttactca gggttatcaatcaaagtggttaattccaccacagggccaggcgagcatttgaggaacgcc ctttggcacactggagacactccaggacaggtacgtacgctgtggcatgacccaaaaaat attggatggaaggacttcactgcttacagatggcacctgactcacagaccacgaactgga cacataagagtggtgatgtatgaaggcaaaaagatcatggcagattctggtagaatttat gacaaaacatatgcaggcggaagactgggtctctttgtcttctcacaagagatggtatac ttctcagacctcaaatatgaatgcagagatgcataa

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