Myxocyprinus asiaticus (Chinese sucker): 127416379 Help Entry 127416379         CDS       T08782                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism masi  Myxocyprinus asiaticus (Chinese sucker) Pathway masi04115   p53 signaling pathway masi04145   Phagocytosis masi04148   Efferocytosis masi04350   TGF-beta signaling pathway masi04510   Focal adhesion masi04512   ECM-receptor interaction masi04518   Integrin signaling masi04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:masi00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     127416379   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127416379    04518 Integrin signaling     127416379  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     127416379    04148 Efferocytosis     127416379   09143 Cell growth and death    04115 p53 signaling pathway     127416379   09144 Cellular community - eukaryotes    04510 Focal adhesion     127416379   09142 Cell motility    04820 Cytoskeleton in muscle cells     127416379  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:masi04131]     127416379   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:masi00536]     127416379 Membrane trafficking [BR:masi04131]  Endocytosis   Phagocytosis    Opsonins     127416379 Glycosaminoglycan binding proteins [BR:masi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127416379 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 EGF cEGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  127416379 NCBI-ProteinID:  XP_051511665 LinkDB All DBs Position 25:18722905..18732767 Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWNCESARVAESPDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLVNFKQFKWTRGSLLTVEKNDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNSAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLASMFKELKGLGVVVQELSNELRKV MDEKNMLMNRIGIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSPCPINGGWGPWSPWDTCSTTCGGGVQSRKRLCNSPVPKYGGKDCVGDAKVTQ LCNKQACPIDGCLSNPCFNGAQCTSFPDGSWKCGKCPTGYTGNGIDCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPPRYTGSQQFGRGVEDAAAKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSEPMYRCECKPGFAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDEVGDRCDNCPY NSNPDQTDTDSNGEGDACAVDIDGDGILNEKDNCPYLYNVDQKDTDLDGVGDQCDNCPLE HNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtctgcggcaatctttttgctactgatgctttggaactgcgagagcgcgagagtc gcagaaagtccagacgacaacagtgtgtacgacctgttcgagctcgtccaagtgccgagg aaaaaccatggggtcaccctggtaaaaggcgacgacccttacagtcccgcctacaagatc ctaaaccccgacctgatccccccggttcccgagagcgccttcagggacctaatcgattcc attcacgcggagagaggatttctactgctggtcaatttcaagcagttcaagtggacgagg ggaagcctcttgaccgtggagaagaatgacggctcaggacccgttttcgaaatcgtttcc aatggaaaagcaaacactctggacattgttttttccactgaaaacaagcaacaggttgtg tccattgaggaagcggatttggcggtgggacattggaagaacatcactcttttcgtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaattcagcggagcttgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcttgcggatcggcaag ggcgcagtgaaagacaggttcatgggagtgctgcaaaatgtgcgctttgttttcggaacg acactggatgcaattctgaggaataaaggatgccaaaactcaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatttacagatgatttgtggcttttcatgtgaggacctagccagcatgttc aaggaactcaaaggtcttggtgtggtggtgcaagagttgtccaacgaactccgcaaagtg atggatgaaaaaaacatgctcatgaatcgcataggcattcatgctggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagttgatgattgcacagagtgcact tgccagaattctgcaactgtgtgccgtaaaatttcatgtcccctaatcccatgtgcaaat gccacagtgcctgatggggagtgctgccctcgctgtggaaccccaagtgactccgctgag gacggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgtggccgctcctgtgaccgcataaataacaactgcgagggcacatcagtgcag acaagagactgttacctccaggagtgtgacaagcgctttaagcaagatggcagctggagt cattggtcaccctggtcatcctgctcagttacctgcggtgctggcgttatcacgcgcatt cgtctttgcaactcgccaacgccgcagatggagggaaaagattgccaaggtgaaggccgg cagactgagaggtgtgaaaaatcaccatgtccaatcaatggcggatggggaccatggtca ccttgggatacttgctctaccacctgtgggggtggtgtccaaagccgtaaacgtctttgc aatagtccagtacccaaatatggtggtaaagactgtgttggagacgcaaaggtcacccag ctctgcaacaagcaagcctgtccaatagatggatgtctttcgaatccatgctttaatgga gctcagtgcacaagcttcccagatggctcctggaaatgtgggaaatgccccacaggttac actggcaatggaattgattgcaaagatatcaatgagtgtaaggaggtccctgatgcttgc tttgaatttaatggagtccataggtgtgagaacacagtgcctggctacaactgtctgcca tgccccccacgctacactggctcacagcagtttggtagaggagttgaggacgctgctgcc aagaaacaggtgtgcacaccacgtaatccttgccttgatggaagccatgactgcaataag aatgctcgctgcaactatctgggacatttctcagagcccatgtaccgctgtgagtgcaaa cctggctttgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaatgcaacctatcactgcaagaaggacaactgtccc aaccttccaaactctgggcaagaagactatgacaaggatggaattggtgatgcttgtgat aatgatgatgacgatgatggcattcctgatgacagggacaattgcccactcatcttcaac ccaaggcagtatgactatgatcgtgatgaggtgggagaccgctgtgataactgtccctac aacagcaacccagaccagactgacactgacagcaatggtgaaggcgatgcctgtgctgtg gacattgatggagatggtattttaaatgagaaggacaactgcccatatctgtacaacgta gaccagaaagacactgatctagatggagttggtgaccagtgtgacaactgccctctggag cacaacccagaccagcttgactctgactctgaccgtgttggagacaaatgtgatagcaac caggacattgatgaggatggtcaccaaaacaacctagacaattgtccatacattgccaat gcgaaccaggctgatcatgacaaggatggtaaaggggacgcctgtgactatgatgatgat aatgatggcattcctgatgacaaggacaactgcagactggctttcaatccagatcaactg gattctgatggtgatggaagaggggatgcttgtaaagatgactttgaccaggataatgtc ccagatatctacgatgtctgtccagagaactttgacatcagtgagactgacttccggaaa tttcagatggtacctctggatcccaagggtacctctcagattgaccccaattgggtggtt cgtcatcaaggcaaggaacttgttcagacagtcaactgcgatcccggcattgctgttggt tttgatgagttcaattcagttgacttcagcggaactttcttcatcaacacggaaagagat gatgactatgctggctttgttttcggataccagtccagttctcgcttttacgtggtgatg tggaagcagatcacacagacctactggtccagcacaccaacaaaagcacagggttactca gggttatcaatcaaagtggttaattccaccacagggccaggcgagcatttgaggaacgcc ctttggcacactggagacactccaggacaggtacgtacgctgtggcatgacccaaaaaat attggatggaaggacttcactgcttacagatggcacctgactcacagaccacgaactgga cacataagagtggtgatgtatgaaggcaaaaagatcatggcagattctggtagaatttat gacaaaacatatgcaggcggaagactgggtctctttgtcttctcacaagagatggtatac ttctcagacctcaaatatgaatgcagagatgcataa

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