Myxocyprinus asiaticus (Chinese sucker): 127418979
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Entry
127418979 CDS
T08782
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04010
MAPK signaling pathway
masi04137
Mitophagy - animal
masi04141
Protein processing in endoplasmic reticulum
masi04210
Apoptosis
masi04217
Necroptosis
masi04621
NOD-like receptor signaling pathway
masi04622
RIG-I-like receptor signaling pathway
masi04920
Adipocytokine signaling pathway
masi05132
Salmonella infection
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127418979
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127418979
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127418979
09143 Cell growth and death
04210 Apoptosis
127418979
04217 Necroptosis
127418979
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127418979
04622 RIG-I-like receptor signaling pathway
127418979
09152 Endocrine system
04920 Adipocytokine signaling pathway
127418979
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127418979
09171 Infectious disease: bacterial
05132 Salmonella infection
127418979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127418979
04121 Ubiquitin system [BR:
masi04121
]
127418979
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127418979
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127418979
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127418979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
zf-RING_4
zf-RING_UBOX
zf-TRAF_2
zf-RING_2
zf-ACC
ATG16
Motif
Other DBs
NCBI-GeneID:
127418979
NCBI-ProteinID:
XP_051515907
LinkDB
All DBs
Position
3:complement(22951758..22980225)
Genome browser
AA seq
574 aa
AA seq
DB search
MAAQDPSPPSSLEGNKPGFPKKILANKLEDKHLCNICQKILRRPFQAQCGHRFCSYCFNK
AVSSEPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEECSWTGTIKE
YEANHEGKCDFRILPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCSKFRTPCRFHVVGCDMTVEKEKIHDHEQACS
YEHLNLLLHFIMGIKVNLESLQPQSLELASLKIHELRQSLQELELKMGQLNGAAASVQGA
CALLPPPSAPTLGTSFTPLPTAIGAALELQLHSEKTKVAELSRRCQELELKVSTFENIVC
VLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMESKMREMSA
ATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL
SLFFVVMRGHSDALIKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIAS
GCPLFCPLSKLDSKNSYIRDDTIFIKTIVDLTGL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggatccctcaccaccatcttcattagaaggcaacaaacctggcttcccc
aagaaaatactcgccaacaagctggaggacaagcatctgtgcaatatctgtcagaaaatc
cttcggagaccttttcaggcgcagtgcggacatcgtttctgttcatattgttttaataaa
gctgtgagctccgaaccacagaaatgcagtgcctgtataaaagaggacatatttgaagag
ccaacatcaattttgaaacagggctgtgcttttcctgataatgctgccaaaagagaagtt
gaagctcttgaagcagtttgcatcaatgaagaatgtagttggacaggcaccatcaaagaa
tatgaggcaaaccatgagggaaagtgtgactttagaatcctgccctgcccatcatgcaaa
gagcttctgagagccaacgaacttgagcgacacaatgaaagagaatgcccagaaaggact
ctgaattgtaaatactgcaaggagccttttcattttaaaaatattaaggcccatgatgag
atatgccctaaatatccaatgatttgcgaaggctgtgccaagaaaaaaatccccagagag
aaatatgtggaccacattaaactgtgttccaaattcagaacaccctgcagatttcatgtt
gtaggctgtgatatgacggtggaaaaggagaagatccatgaccatgagcaagcctgttcc
tacgagcacttaaacctcctactgcatttcatcatgggcatcaaggtgaacttggagagt
ctgcagcctcagagtctggagttggccagcctcaagatccatgagctgcgtcagtctctg
caggagctggagctgaaaatgggccagctgaatggagcggcggcttctgtgcagggggcc
tgcgcactgttgcctccaccatcagctccaacgcttggtacatctttcaccccccttcct
actgccattggggcagccttggagctgcagctacacagcgagaagaccaaagtggcggag
ctcagccgtcgctgtcaggagctggagctgaaggtaagcacctttgagaacatcgtctgc
gtgctcaaccgtgagatggagcgctctgccaccaccatggaggcctataaccgccagcac
cggcttgaccaggacaagattgagatactaaacaacaaggtacgacagttggagaggacg
gtaggcctaagggatctctccatcgtggagatggagtcaaagatgagggagatgtctgct
gccacctacgatggcgtctttgtctggaagatttctgacttctcaaaaaagagacaggat
gctgtagctggacgggcgccagctatgttctctcctgcattttacacaagcaaatatggc
tacaagatgtgtttgcgcatctatctgaatggggatgggacgggacgtggtactcacttg
tctctgtttttcgtggtgatgaggggacacagtgatgccttgatcaagtggccttttaac
cagaaggtcacactcatgttgcttgatcagaacaacagagagcacattattgatgccttc
cggccggacatctcctcttcctccttccagaggcctgtcagtgacatgaacattgccagc
ggctgcccactcttctgccctctttccaaactagactccaaaaactcctacatccgagat
gacactatcttcatcaagaccattgttgacctcacaggcctttaa
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