Myxocyprinus asiaticus (Chinese sucker): 127419350
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Entry
127419350 CDS
T08782
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04622
RIG-I-like receptor signaling pathway
masi04623
Cytosolic DNA-sensing pathway
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127419350
04623 Cytosolic DNA-sensing pathway
127419350
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127419350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
masi04054
]
127419350
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127419350
Pattern recognition receptors [BR:
masi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127419350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
ResIII
DEAD
Helicase_C
SWI2_SNF2
SNF2-rel_dom
PNMA
PhoH
WDCP
AAA_22
Mg_chelatase
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-GeneID:
127419350
NCBI-ProteinID:
XP_051516667
LinkDB
All DBs
Position
28:44780803..44807585
Genome browser
AA seq
938 aa
AA seq
DB search
MYELEKENLRRSSEYITKILRPSLIKTFMTTYLDKEVVERILSIESTLSVTTAAQMLLDK
MCELEEVGWFQAFLDTLHASDYHGLYAAIKEWNFRELEELQEHRKLLERIEPSITKHMKP
SELLTHMSDCLNLRECEEIRAVETLRGRIAASEKLVESLVRSDKPNWFKVLKIALDACSL
DQALELLELNGGDMVMKDAACDGDSETMMSVCFEYREEGGSEDTLLKSANNISFTEMPSR
STGVGEDEHSGERKLREYQKELTTAAVEGHNTIICAPTGCGKTIVALAICENHLQQFPGA
KVVFLATKVDVYEQQYKLFKEHFSCKDPSIRVTGMCGEMEYLSVRLLLENHDIVVLTAQI
LVNALNSGEVSSLELLSLILLDECHNTTGKHPYNNIMTRYLDTKLTTNTHSLPQIVGLTA
SVGIGSFKNLLEAENNILQLCANLDARVITTVTQHLDELRSYVHTPQKEFFEVPQRTSDP
FIRIICNIMSNIEQLAQTVYNIESLSNIQNREYGSQKYEQWIVSVQKCCRVLQMSNEEEE
RRICRALYNYTEHLRKYNDALIINEDARTKDALDYLDAFFEQVRNAGYDEIERKLTSLFD
SQRPQLLSLANEGQLNPKLEELKFILDEEYHNNEQTRTVLFVRTRALADAMKKWIEDTDS
LKFLQPGVLIGKGRKSNSGMTLTNKKGVLDSFKSSDQSKILIATSVADEGIDIPQCNLVL
MYEYVGNVVKMVQVRGRGRAQGSRCYLISSSKECINKERMNLAKEKLVEKAIAQLQSHPD
DLRNKVDMLQREDKARRNLISASPDKPKTQASYQLLCGKCKKFAALSDDLRVVQKAHHII
LDHTIFTRCVTVPHKNPKRFDGICKKKKMLCADCRHDWGIIVSYINIQDLPVLKIESFVL
KDLITQQQVFFGKWREVTFAIREFDVTEITPETWPLRE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagctggaaaaggagaatttacgtcgctcgagtgaatatatcactaagatttta
cgaccgtcacttattaaaaccttcatgacgacatacctggataaagaggttgtggaaaga
atcctctcaatagagtcgacattgtctgtgaccacagcagctcaaatgttgttggacaag
atgtgtgagttagaggaagtgggctggtttcaggcctttctggacacccttcatgcctca
gactaccatggtctgtatgcagccattaaggagtggaacttccgtgagttggaagagctg
caggaacataggaagcttctggagaggatcgaaccatccatcacaaaacacatgaagccc
agcgagctgctcacacacatgagcgactgtctgaacctgagagaatgcgaggagatccga
gctgtggaaaccctgcgtggtcgtatagctgccagtgagaaactagtggagagtcttgta
cgctcagataaaccaaactggtttaaagtgctgaagattgctctggacgcatgcagctta
gaccaggcattagaactgctggaattaaatggaggtgatatggttatgaaggatgctgca
tgtgatggagattcagaaaccatgatgtcagtgtgttttgagtacagagaggagggtggg
agtgaagatactctactgaagagcgccaacaacatcagtttcacagagatgcccagcagg
tcaacaggtgtcggtgaagatgagcattcaggtgagaggaagctcagagagtatcagaag
gaactgaccaccgctgctgtagaaggacacaacaccatcatctgtgctcctacaggatgt
gggaaaactattgttgccttggcaatctgtgaaaatcacctgcagcagtttcccggggca
aaggttgtgttcttggcaaccaaggtcgacgtctatgaacagcaatataaactttttaag
gaacacttttcctgcaaggaccccagtatcagggtgactggcatgtgtggtgaaatggag
tatctgtctgtgcgtttgctcctggagaatcatgatattgtggtgttgacggctcagatc
ctggtgaacgctcttaatagcggcgaggtgtcgtctcttgagctgctgtcactcattctg
ctggatgagtgtcataacacgactggaaaacacccgtataacaacatcatgacccgttac
ctggataccaaacttaccaccaacacacactcactgccacagattgtgggtctgacagca
tcagttggcatcggttcattcaagaatctgctggaggcagaaaacaatatcttacagctg
tgtgctaacctggatgccagggtcatcaccacagttacccaacacctggacgagctcagg
tcatatgtgcacacacctcagaaagagttttttgaggttcctcagcgcacatctgatccc
ttcatcaggataatctgcaacatcatgagtaacatcgaacagctcgcacagactgtctac
aatatcgagagcctgtcaaacattcagaaccgtgagtatggatctcagaagtacgagcag
tggatcgtgtccgttcagaaatgctgcagagttcttcagatgagcaatgaagaggaggag
aggaggatctgcagagcgctctacaactacactgaacacctgaggaaatataacgatgct
ctgataattaacgaggacgctcggactaaagacgctctagattatctggacgcttttttt
gagcaggtcagaaacgccggctacgatgagatcgagaggaaactcaccagcttgtttgac
agtcagcggccgcagttgctgtcattggccaatgaggggcagctgaaccctaaactagag
gagctcaagttcattctggatgaagaatatcacaacaatgaacagacgcgcacggttctg
ttcgtcaggacacgagccctcgccgatgccatgaaaaaatggattgaagacacagattct
ctgaagttcctgcaacccggagttttgatcggaaaaggacgaaaatcaaactcgggaatg
actctgaccaataagaaaggagttctggactcgttcaagagttctgatcagagtaagata
ctgatcgccacatctgtcgctgatgaaggcatcgatatcccacaatgcaacctggtgctc
atgtatgagtatgtggggaacgtggtgaagatggtgcaagttagaggtcgtggtcgtgcg
cagggcagtcgctgttacctgatctccagcagtaaggagtgcattaacaaagagcgcatg
aacttggctaaggagaagttagtggagaaagccatcgcccaactgcagagtcaccctgat
gacctccgcaacaaggtggacatgcttcagagggaagataaggccaggagaaatcttatc
agcgcgagtcctgacaaacccaaaactcaggccagctaccagctcctctgcggcaagtgc
aagaagtttgcggctttgagtgatgatcttcgagtcgtgcagaaggcgcaccacatcatt
ctggatcacaccatcttcacacgctgcgtcacagttccccataaaaaccccaaaagattt
gatggcatctgtaagaaaaagaagatgctgtgtgctgactgcagacacgactggggcatc
atcgtctcctacatcaacatacaggatctgccggtgttgaagatcgagagttttgtgttg
aaggatctgatcactcaacagcaggtgtttttcgggaagtggcgtgaggtgacgttcgcc
atacgagagtttgacgtgacggagatcacgcctgaaacatggccactgagagaatga
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