Myxocyprinus asiaticus (Chinese sucker): 127420273
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Entry
127420273 CDS
T08782
Name
(RefSeq) antiviral innate immune response receptor RIG-I-like
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04622
RIG-I-like receptor signaling pathway
masi04623
Cytosolic DNA-sensing pathway
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127420273
04623 Cytosolic DNA-sensing pathway
127420273
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127420273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
masi04054
]
127420273
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127420273
Pattern recognition receptors [BR:
masi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127420273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
ResIII
DEAD
Helicase_C
SNF2-rel_dom
Mg_chelatase
PNMA
PhoH
AAA_22
Motif
Other DBs
NCBI-GeneID:
127420273
NCBI-ProteinID:
XP_051518329
LinkDB
All DBs
Position
29:complement(1504963..1526881)
Genome browser
AA seq
937 aa
AA seq
DB search
MYEQEKENLRRSSEYITKILRPSLIKTFMTEYLDKEVVENIISIELKSSVTTAAQILLDR
MYELDKVGWFQAFLDILHASDYTGLYAAIKEWNFREIEELQEHRKLLEKIEPSITKHMKP
GELLTHMSDCLNMRECEEIRATENMRGPIAASEKLVECLLRSDKPNWFKVLKIALDACSL
YQALELLELNGGSTVMKEAACDGDSETMMSVCFEYREGGESEDNLSANNISSTEMTIGST
GVGEGERLGEKKLREYQKELTTAAAKGHNTIICAPTGCGKTIVALAICENHLQKFPGRAK
IVFMATKVDVYEQQYKLFKEHFSCKDPSIRVTGMCGDMEGLSVCWLLENHDIVVLTAQIL
VNALNSGEVSSLELLSLILLDECHNTTGKHPYNNIMTRYLDTKLTTNTHSLPQIVGLTAS
VGIGSFKNLLEAENNILQLCANLDARVITTVTQHLDELRSYVHTPQKEFFEVLQRTSDPF
IRIICNIMSNIEQLAQTVYNIESLSNVQNREYGSQKYEQWIVSVQKCCRVLQMSNEEEER
RICRALYNYTEHLRKYNDALIINEDARTKDALDYLDAFFEQVRNAGYDETERKVTALFDS
QRPQLLLLANEGQQNPKLEELKFILGEEYHNNEQTRTVLFVRTRALADAMKKWIEDTDSL
KFLKPGVLIGKGRKSNSGMTLTNKKGVLDSFKSSDQSKILIATSVADEGIDIPQCNLVLM
YEYVGNVVKMVQVRGRGRAQGSRCFLISSSKERIEKERMNVFKEQIVETAITRLQSRPDD
ICNKVDLIQREDKARRDLISASPDKPKTQASYQLLCAKCKKFAALSEDLRVVQKSHHIIL
DNTIFKRCITIPHKNPKSFDGISKKEKMLCAECRHDWGIIASYVTIQDLPVLKIESFVLK
NRVTQKQLYFRKWRDVTFAIREFDMTEITPETWPLRE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagcaggaaaaggagaatttacgacgctcgagtgaatatatcactaagattttg
cgaccgtcacttatcaaaaccttcatgacggaatacctggataaagaggtcgtggaaaac
attatctcaatagagctgaaatcatctgttaccacagcagctcaaatattgttggacaga
atgtatgagttagataaagtgggctggtttcaggcctttctggacatcctacatgcctca
gactatactggtctttatgcggccattaaggagtggaacttccgtgagatagaagagctg
caggaacacagaaagcttctggagaagatcgaaccatccatcaccaaacacatgaagcct
ggcgagctgctcacccacatgagcgactgtctgaacatgagggaatgcgaggagatccga
gcgacagaaaatatgcgtggtccgatagctgccagtgagaaactggtggagtgtcttttg
cgttcagataaaccaaactggtttaaagtgctgaagatcgctctggacgcatgcagctta
taccaggcattagaactgctagaattaaatggaggtagtacggttatgaaggaagctgca
tgtgatggagattcagaaacaatgatgtcagtgtgttttgagtacagagagggcggtgag
agtgaagataatctgagcgctaacaacatcagttccacagagatgaccattgggtcaaca
ggggtcggtgaaggtgagcgtttaggtgaaaagaagcttagagagtatcagaaggaactg
accaccgctgctgctaaaggacacaacaccatcatctgtgctcctacaggatgtgggaaa
actattgttgccttggcaatctgtgaaaatcacctgcagaagttccctggcagggcaaag
attgtgttcatggcaacaaaggttgatgtctatgaacagcagtacaaacttttcaaggaa
cacttttcctgcaaggaccccagtatcagggtgacgggtatgtgtggtgatatggagggt
ctgtctgtgtgctggctcctggagaatcatgatattgtggtgttgacggctcagatcctg
gtgaacgctcttaatagcggcgaggtgtcgtctctcgagctgctgtcactcattctgctg
gatgagtgtcataacacgaccggaaaacacccgtataacaacatcatgacccgttacctg
gataccaaacttaccaccaacacacactcactgccacagattgtgggtctgacagcgtca
gttggcatcggttcattcaagaatctgctggaggcagaaaacaatatcttacagctgtgt
gctaacctggatgccagggtcatcaccacagttacccaacacctggacgagctcaggtca
tatgtgcacacacctcagaaagagttttttgaggttcttcagcgcacatctgatcccttc
atcaggataatctgcaacatcatgagtaacatcgaacagctcgcacagactgtctacaat
atcgagagtctgtcaaacgttcagaaccgtgagtatggatctcagaagtacgagcagtgg
atcgtgtccgttcagaaatgctgcagagttcttcagatgagcaatgaagaggaggagagg
aggatctgcagagcgctctacaactacactgaacacctgaggaaatataatgatgctctg
ataattaacgaggacgctcggactaaagatgcgctggattatctggatgcgttttttgag
caggtccgaaacgccggctacgatgagactgagaggaaagtcaccgccttatttgacagt
cagcggccgcagttgctgcttttggccaatgaggggcagcagaaccctaaactagaggag
ctcaagttcattctgggtgaagaatatcacaacaatgaacagacgcgcacggttctgttc
gtcaggacacgagccctcgctgatgccatgaagaaatggattgaagacactgattccctg
aagttcctgaaacccggagttctgattggaaaaggacgaaaatcaaactcgggaatgact
ctgaccaataagaaaggagttctggactcgtttaagagttctgatcagagtaagatactg
atcgccacatctgtcgctgatgaaggcatcgatatcccacaatgcaacctggtgctcatg
tatgagtatgtggggaacgtggtgaagatggtgcaagttagaggtcgtggtcgtgcacag
ggcagtcgttgtttcctgatctccagcagtaaagagcgcattgagaaagagcgcatgaac
gtgtttaaggagcagatcgtggaaaccgccatcacccgactgcagagtcgccctgatgac
atctgtaacaaggtggacctgatacagcgggaagataaggccaggagggatcttattagt
gcgagtcctgataaacccaaaactcaggccagctaccagctcctctgcgccaagtgcaag
aagtttgcggctttgagcgaggaccttcgagtcgtgcagaagtctcatcacatcattctg
gataatactatcttcaaacgctgcatcacaataccccataaaaaccccaaaagctttgat
ggtatcagcaagaaagagaagatgctgtgtgctgagtgcagacacgactggggcatcatc
gcctcctacgtcaccatacaggatctgccggtgttgaagatcgagagtttcgtgttgaag
aatcgcgtcactcaaaagcagctctacttcaggaagtggcgtgacgtgacgttcgccatt
cgagagtttgacatgacggagatcacgcctgaaacatggccactgagagaataa
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