Myxocyprinus asiaticus (Chinese sucker): 127428703
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Entry
127428703 CDS
T08782
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04010
MAPK signaling pathway
masi04137
Mitophagy - animal
masi04141
Protein processing in endoplasmic reticulum
masi04210
Apoptosis
masi04217
Necroptosis
masi04621
NOD-like receptor signaling pathway
masi04622
RIG-I-like receptor signaling pathway
masi04920
Adipocytokine signaling pathway
masi05132
Salmonella infection
masi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127428703
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127428703
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127428703
09143 Cell growth and death
04210 Apoptosis
127428703
04217 Necroptosis
127428703
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127428703
04622 RIG-I-like receptor signaling pathway
127428703
09152 Endocrine system
04920 Adipocytokine signaling pathway
127428703
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127428703
09171 Infectious disease: bacterial
05132 Salmonella infection
127428703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127428703
04121 Ubiquitin system [BR:
masi04121
]
127428703
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127428703
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127428703
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127428703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_4
zf-C3HC4_2
zf-RING_5
ADIP
zf-C3HC4_4
Paramyxo_NS_C
TRAFD1-XIAF1_ZnF
TMF_DNA_bd
zf-RING_6
ATG16
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
127428703
NCBI-ProteinID:
XP_051533206
LinkDB
All DBs
Position
3:54346189..54373167
Genome browser
AA seq
553 aa
AA seq
DB search
MSAEFSVHLIKSKELNMMINTGEAVGKWKVMARPSLPSSLDSTLPGISRVVLSVSMEPKY
QCQQCKEILRKPFQAQCGHRFCVFCFKQLTSSGPTPCEACRAEGIFEEELSMLNITVAFP
DNAARREIDNLPAKCPNEGCTWTGTLKEYEGQHEGRCDFERVKCEACQTLILLSEKDRHN
ERECEARTLNCKYCKVTFNFKDIKAHDEICQKFPMQCKDCGKKKIPREKFQEHSKSCAKS
KSACQFSEIGCRVVTDNGKQQEHEQASVMDHLRLMLGVLSSVRLRAEGAGECQEDSGLGL
YRGPEDAPLAGAHAAAHNAARRGDPGVQQKVTALENIVCVLNREVERSALTLEALSRQHR
LDQEKIENLSNKVRQLERTLTMRDLQLAESEQSLQELQFCTYDGVFIWKIADFSRRRQDA
VGGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQ
KVTLMLLDQNNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDD
TIFIKAIVDLTGL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaattcagtgttcatctcataaagtcaaaagaattaaatatgatgatcaac
actggcgaagctgtgggtaaatggaaggtaatggcacgtccatctttgccctcctctttg
gactccacattgcctgggatatcccgggtagttctgtcggtatccatggaaccgaaatat
cagtgccagcagtgtaaagagattctcaggaaaccttttcaagcgcagtgcggacatcgc
ttctgtgtgttctgtttcaaacaacttaccagttcaggtcccacaccttgtgaagcctgc
cgtgctgagggtatatttgaagaggaactgtctatgctcaatattacagtggcatttcct
gacaacgcagctcgacgagaaatcgataacttgcccgctaagtgcccaaatgaaggatgt
acatggacaggaacattaaaagagtatgagggtcagcatgaaggtcgctgtgactttgag
cgtgtcaaatgtgaagcatgtcaaactcttatcttgcttagcgagaaagaccgtcacaat
gagcgggaatgtgaggccagaaccctcaattgcaagtactgcaaggtcacattcaacttc
aaggatattaaggcccacgatgaaatttgtcagaagtttcctatgcaatgcaaagactgt
ggaaaaaagaaaatcccacgagagaagtttcaagaacacagcaagtcgtgtgcaaagtcc
aagtcggcatgccagttcagtgagattggctgcagggttgtgactgacaatggtaaacag
caggagcatgaacaggccagtgtgatggatcatttgcgtctcatgttgggtgtactctcc
tctgtgcgcctgcgtgccgagggggctggagagtgccaggaagattccggactgggactg
taccgcggacctgaagacgctccactggcaggggctcatgctgccgcccataatgcagca
agaagaggcgatcctggtgttcaacagaaagtcacagcattggagaatatagtttgtgtg
ttgaatcgagaggtggagcgttcagccctcaccttggaggctttgtctcgacaacaccgc
ctggaccaggagaagatcgagaacttgtcaaacaaggtgcgacagctggaacggacttta
accatgcgagatctgcagttagcagagtccgagcagtctttgcaggagctgcagttttgc
acttacgatggtgttttcatatggaaaatagcagacttctctcgccgcaggcaagatgca
gtgggtggccgagctccagcaatgttctcgcctgcattctactccagtaaatatggttat
aagatgtgtctgagactgtatctgaatggtgacggcacaggcaggggcacacacctctcg
ctgttctttgtggtcatgaggggcaaatatgatgcgctgttgaaatggcccttcagccag
aaggtgacattgatgcttttggaccagaacaacagagagcacatcattgatgccttcaga
cctgatgtgagctccacctccttccagagacccatcagtgagatgaacatcgccagcggc
tgcccgctcttctgcccacttgccaagctggcaggcaaaagctcctacctgagagatgat
actatatttattaaagccatagtggatctcactggattataa
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