Myxocyprinus asiaticus (Chinese sucker): 127433010
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Entry
127433010 CDS
T08782
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
masi04515
]
127433010
Cell adhesion molecules [BR:
masi04515
]
Cadherins
Protocadherins
127433010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
127433010
NCBI-ProteinID:
XP_051540555
LinkDB
All DBs
Position
42:complement(20039077..20090684)
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AA seq
969 aa
AA seq
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MRTQIQRRILFCQAVWLFFCAVFWRNTDAQLRYTIPEELKEGSIVGNVAKDLGLDVSEIL
NRKLRIASESGKQYFSLNLRNGELLVNEVLDRENLCGQSKRCLLPLQVIIEDPLQFYRVE
VDIQDINDNSPIFLSERNMIEVPESTQTGARFRLEPAQDPDAGSNSLRTYAINKNEHFVL
NIKNNKDGTKVPEIVLEKAVDREKQSVHHLILTGIDGGDPARSGTTQITVNILDANDNAP
IFEQELYEIKVMESTVPGTMILTVKAIDLDDGVNSEVEYSFGAHTPELIQNLFSINQEKG
ELVVSKHIDYEISTSYKFDIRARDKGPLAMESHCRIQVAVLDVNDNAPEITITSSPKPVR
EDAPAGTMVALINVKDLDSGVNGNVTLDMSPGTPFTLKPTFSNHYALVTNEYLNREEFPR
YNIELKASDSGTPKLQSSKFITVNILDVNDNPPVFSEPVYTVYIEENSAPGSILASVTAS
DLDTGENAKIVYSVLDTNTRDIPVSSYVYVNSENGSIFSMHSFDYEKIKVFHIIVHAKDH
GSPPLGSNATVHVFIMDQNDNVPAVIYPSSITGSVSHQRMPRSAKAGHLVTKVTAVDADS
GHNAWLFYRLAEATDASLFGVNLHTGEVRTKRFVSEQDDSSQRLIIEIKDNGDPEQSTTV
SVDILIEDGFHEPISEFSMKTSENNKKSGKITLYLIISLGTVSVLSLLTLFTLIVKCVRN
SIGRSSCCVRRTDSGYTNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPLSEF
SDLTLVKPSSTTNFTDTLNVLDASLADSAWTFESQQQKPPNTDWRFPPNQRPGPSGQHRF
HTLQQRWTPYEKSRAGARPEDAGAGAGVIAGTGPWPNPPTEAEQIHALMAAANASEATAT
LGPRYNPQYGPDYRQNVYIPGSTATLTANPQQQIPQQALPPPQALPPAEAPKSAQTPASK
KKPTKKDKK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgcaaatacaaagaaggattctgttctgccaggcggtatggctgttcttttgc
gctgtcttttggagaaatacagacgcgcagcttcgttatacaataccggaggagctgaaa
gagggatctattgttggaaatgtagctaaagatctcggtttggatgtatctgaaatatta
aatcgtaaattacggatagcatctgagtctggtaagcagtattttagtttgaatttgcga
aatggcgagctgcttgtgaatgaagtcctagacagggaaaacctgtgcggacaaagcaag
agatgtttgttaccactacaagtcataatcgaggatccactccagttttaccgcgttgag
gtggacatccaagatattaatgacaactctccaatttttctttcggaaagaaacatgatt
gaggtgccagaatcaacgcaaactggagcgaggtttcgtttggaacctgctcaggatcct
gacgctggatcaaactcattacgcacatatgctattaataaaaatgagcatttcgttttg
aacataaaaaacaataaagacggaacaaaagtcccagaaattgttttagagaaagctgtc
gacagagagaaacagtctgtgcaccatctaatcttgacaggtattgatgggggtgatcca
gcgaggtcaggtacaacccagatcactgtaaatattcttgatgcaaatgataatgcccct
atatttgaacaggagttatatgagattaaagtgatggagagtacagtcccaggtacaatg
atacttactgtaaaagcaattgacctggatgacggcgtaaacagtgaggttgagtattca
tttggggcgcatacacctgaattaatacaaaatttgttttctattaatcaagagaaaggc
gaattagtcgtatccaagcacattgattacgaaatcagcacttcctataaatttgacata
cgtgcaagagacaaaggaccattagcaatggagagtcattgcagaattcaagtagctgtt
ctagatgtgaacgataacgctccagaaatcaccatcacctcctctccaaaacctgtgcga
gaagatgcgcccgctgggaccatggtagcgttaataaatgttaaagatttggattcagga
gtaaatggaaacgtaacacttgacatgtcaccgggcaccccttttacattaaagccaacg
ttttcaaaccattacgcactcgttacaaatgaatacttaaatcgagaagagtttcctaga
tacaatattgagctcaaagcgtcagactctggaacacctaaactacaatcgagtaagttt
attacagtaaatatactggatgtaaatgataatcctcccgttttttctgaacctgtatat
acggtttatatagaagaaaatagcgccccgggatcaattttagcatcagtgacagcatca
gatttagatacgggagaaaatgccaaaattgtctattcagttctggacactaatactcga
gacataccagtctcctcttatgtatatgtaaactcagaaaatggtagtatatttagcatg
cactcttttgactatgagaaaattaaggtgtttcacattatcgttcatgctaaagaccat
ggctccccacctcttggtagcaacgccactgttcatgtgtttattatggaccaaaacgat
aacgtccccgctgttatttatccttcctcaattacggggtctgtgtctcatcagaggatg
ccccgttctgctaaagcaggacatctggttacaaaggtaacagcagtggacgctgattcg
ggtcacaatgcctggctattctacaggctcgcggaggccacggacgcgtctctgttcggt
gtgaatttgcatactggagaggtgaggactaaacgctttgtttcagagcaggatgactct
tctcagagactgattattgaaataaaggataatggagatccagagcaatccaccacagtc
tcagtggatatactgatagaggatgggtttcatgagcccatctcggaatttagtatgaaa
acgtccgagaacaataagaaaagcggcaaaatcactttgtatttgatcatttctttgggc
acagtgtcagttttgtctctgttgacattgttcacgttgattgtcaaatgcgttagaaac
agcattggcagatcaagttgctgtgtcaggcgaaccgattctggatacacgaaccccaac
agaaaccttcagatccagctcaacactgacgggcccattaagtatgtggaggttctggga
ggagatatgatgtctcagagtcagtcttttgggtcctatctctctccactgtcagaattc
agtgatttgaccctcgttaagcccagcagcaccacaaactttacagacacgctaaacgtg
cttgatgcgtcattagcagacagcgcgtggacattcgagagccaacagcaaaagccacct
aacactgactggcgatttcccccaaaccagaggcctggacccagtggccaacacaggttc
cacaccttgcagcagagatggactccctacgagaagtccagggctggagcccgtcctgaa
gatgcaggtgctggtgctggtgtgatagcaggaacaggaccatggcccaacccccctact
gaagctgaacagatccatgctctgatggcagcagcgaatgcaagtgaagccactgcaact
ctcggccctcgctacaatccacagtatggtcctgactaccgccagaatgtctacatccca
ggcagtactgctaccctcactgccaaccctcagcaacagataccccagcaggccctgcct
cctccccaggctttgccccccgctgaagcccccaagtcagctcaaacacccgccagcaag
aagaagcccactaagaaagacaagaagtaa
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