Myxocyprinus asiaticus (Chinese sucker): 127438211
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Entry
127438211 CDS
T08782
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03018
RNA degradation
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127438211
09123 Folding, sorting and degradation
03018 RNA degradation
127438211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127438211
03041 Spliceosome [BR:
masi03041
]
127438211
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127438211
mRNA degradation factors
5'-3' decay
Lsm complex
127438211
Spliceosome [BR:
masi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127438211
Complex C
U2 snRNP components
127438211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
YfkB
Peptidase_M16_M
Motif
Other DBs
NCBI-GeneID:
127438211
NCBI-ProteinID:
XP_051549582
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All DBs
Position
49:24164631..24169285
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AA seq
102 aa
AA seq
DB search
MADEAEQPQATNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagctgagcagccacaggccaccaacactgtggaagagcctctggatctc
atccgtttgagtttggatgagagaatctatgtgaagatgaggaatgacagagagctgcgc
ggcagactgcatgcctatgatcagcacttaaacatgatcctcggagatgttgaagagaca
gtgacgacagtagaaattgatgaggagacgtatgaggagatttacaagtcaacgaagcgc
aacattcccatgctgtttgttcgaggggatggagtcgtgttagttgccccaccgttgagg
gttggataa
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