Myxocyprinus asiaticus (Chinese sucker): 127438441
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Entry
127438441 CDS
T08782
Name
(RefSeq) slit homolog 1 protein-like isoform X1
KO
K06838
slit 1
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127438441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
masi00536
]
127438441
Glycosaminoglycan binding proteins [BR:
masi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
127438441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRCT
LRR_9
EGF_TEN
LRRNT
LRR_14
EGF_3
EGF_CA
EGF_2
JAG1-like_EGF2
EGF_DL_JAG
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
127438441
NCBI-ProteinID:
XP_051549992
LinkDB
All DBs
Position
49:complement(21576046..21647836)
Genome browser
AA seq
1529 aa
AA seq
DB search
MLPSAGLCIWGVLSALILVGHSGACPPHCSCTGTTVDCHGLAFKNVPRNIPKNTERLDLN
ANNLTHIGKDEFAGLRHLRILHLMDNQIVSFDRGAFNDLKELDRLRLNRNRLQQLPELLF
LKNPALSRLDLSENVIQVIPRRAFRGATDIKNLQLDRNHITCIEDGAFRALRVLEVLTLN
NNNISTIPISSFNHMPKLRTFRLHSNSLRCDCHLSWLSQWLRQRPALGLYTQCSSPPNLH
GLNLAELQKKEFACTGIFDSSPQPCGLASGSCPPMCTCSNNIVDCRGKGLTAIPANMPES
MTEIRLEQNGIKSVPPGAFASYKRLRRIDMSNNQISEIATDAFQGLRSLNSLVLYGNKIT
DLPRGVFDGLSTLELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFTPLKS
IQTLHLAQNPFVCDCGLKWLADFLRSNPIETSGTRCSSPRRLANKRISQIKSKKFRCSAA
KEQYHIPGAEDTRLNKDCNSKPVCPPKCRCEATVVDCSNLRLTKFPEHLPLSTTELRLNN
NDLSILEATGLFRSLTHLKKINLSNNKISEIEDGAFDGASSVVELHLTVNHLVSVRGGMF
QGMDGLRMLMLRNNRIRCIHNSSFSGLQNVRLLSLYDNQLTTIMPGAFNTLPNLSTLNLL
ANPFNCDCRLSWLGEWFRSRQIVTGNPRCQNPTFLREIPLQDVAKPDFLCDKVILEEDKI
CVPKPECPEECTCLDTVVRCSNKHLFSLPQGIPHNVTELYLDGNQFVAVPTELSTFKYLQ
LVDLSNNKISSLSNSSFANMSQLTTLILSYNALRCIPPLAFGGLSSLRLLSLHGNNISEL
HQEIFRDATSLSHLAIGANPLYCDCRLHWLSDWVKSGYKEPGIARCAGPQGMEGKLLLTT
PGNNFQCTGPVDPSVSGKCSPCSSNPCQNEGRCHNDPVHLYKCTCPQGYKGKSCEVLVNA
CEGNPCVNGGTCHSEEARKGFSCMCPLGYDGQFCEVDVDDCVDSKCENGTICVDRVGNYT
CVCPHPFSGQRCEEYEEDLCYPGQNPCHRGSTCIPTVTGPKCICPPGFVGDDCSVDYNEC
EGHYCQNGAQCVDHVAGYSCICPQGYSGRLCEVALSLSGCELVYCDNGAPCAESEGGAFC
QCLPGYGGPRCEKLLSVNFIDRDSYLLLSEVKHWPQTNITLQVSTAEDKGILLYNGVNDH
IAVELHEGHIKVTYDSGNQPGSAIFSSEIVNDGQFHTVELVTYDRMVNLSIDGGLPTTLD
SLGHVQPLTKDAPLYVGGMPENAQSLSFNQWPTLNGSSFQGCIRNLYINNELQDFTRTQM
KPGVVPGCLPCQELRCVHGLCQPNTAVGPVCHCQPGWGGQHCDQVLLEAATNPCQKNKCV
HGTCIPVDIQSYHCKCTEGFQGPLCSQQYATPSPCTALSCQHGYCEISQTGQAQCICDSG
YSGQLCDLVAPCQGESVRDFHRMRRGEVQCQSTQPLSWVECRGGCRVDTGFCCTSIRIRR
RRYSFECDDGTSFTQVVEKTVECGCEKCV
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccagtgcaggtttgtgcatttggggtgtgctgagtgccctaattctcgtgggt
cactctggagcgtgcccacctcactgttcctgcacgggcactactgtggactgccatgga
cttgccttcaagaatgtgccacgaaatataccaaagaacaccgaaagactggacctgaac
gcaaacaacctcacacatattggcaaggacgaattcgctggcctgaggcacctcagaatt
ttgcacctcatggataatcagattgtttcttttgatagaggagccttcaatgatctgaag
gagttggacagactgcgtctcaacagaaatcgtcttcagcaactccctgagctgctgttt
ctaaaaaatcctgctctctccagattggacttaagtgaaaatgtcatccaggtcatacca
aggagagcgtttcgaggtgccacagacatcaagaacttacagctggacaggaaccatatt
acatgcattgaggatggagcatttcgtgcattgagagttttggaggtcctaacactgaac
aacaacaatatcagcaccatccctatttccagtttcaaccacatgcccaagttacgtaca
tttcggctgcattctaatagtctgcgatgtgactgtcacctgtcatggctgtctcaatgg
ctcaggcagaggccagctttgggtctgtacacacagtgcagttctcctcctaacctacat
ggcctcaacctggctgaactgcagaagaaagagttcgcatgcactggcattttcgattca
agtcctcaaccgtgtggtctggcatctggctcctgcccgccgatgtgcacctgcagtaac
aatatcgtggactgtagaggaaaaggtcttacagccataccagcaaacatgcctgagagt
atgactgagatacgattagagcagaacggtataaagtctgtccctcctggagcattcgcc
tcttataagagactgcggagaatagatatgagtaataaccaaatatctgaaattgctact
gatgcatttcaaggactgcgctcactcaactcactggttctttatggaaataagatcaca
gatttgcctagaggtgtttttgacggattgagcacattagagttactattattaaatgcc
aataaaatccactgtgttcgtgttaacgtcttccaggaccttgagaacttgtctttattg
tctctctatgacaataagatccagactctagccaaaggcacctttacaccactgaaatcc
atccagactctacatttggctcagaacccgttcgtttgtgactgcggtctaaagtggctg
gcggactttttgcgttctaacccgattgagaccagcggcactcgctgctccagtccacga
cgacttgccaacaaacgtatcagtcaaattaagagcaagaagttccgctgttcagcagcc
aaggaacagtaccacatcccaggcgcagaagacacgcgtttgaataaggactgtaacagc
aagcccgtttgtccaccgaaatgtcgctgtgaagctactgtggtggactgctcaaattta
cgccttaccaagttcccagagcaccttccactttcaacaactgaactacgtctcaataac
aacgatctgtccatcctggaagcaacaggactctttaggtccctcactcatctcaagaag
ataaaccttagcaacaataaaatctctgagattgaggatggagcttttgatggggcgtca
tctgtggttgaacttcacctaactgtcaaccacctggtgtccgtgcgtggaggaatgttt
cagggaatggacggattacgcatgctgatgctcaggaataatcgcatccgctgcatccat
aacagcagcttttctggccttcagaacgtgcgtctgctctcgctctacgacaaccagctc
accacaatcatgcctggcgcttttaacacgctgccaaacctctccacactaaacctgctg
gcgaatccttttaactgtgattgtcgtctgtcttggttgggagagtggtttcgttctcgg
cagattgtgacaggcaatcctcgctgtcagaatcccaccttcctcagagagatcccactg
caggacgtggcaaagccagacttcctctgtgacaaggttatcttggaagaggacaaaatc
tgtgtgccgaagccagagtgtccagaggagtgcacttgtctggataccgtggtgcgttgc
agcaacaaacacttgttcagcttaccacaaggcatcccacacaatgtcactgaactatac
ctggatgggaatcagtttgttgccgtgcccacagagctctctacttttaaatacctgcag
ctcgtggacttgagcaacaacaaaatcagctccttgtccaactcatcttttgccaacatg
agtcagctcacaacactcatcttaagttacaatgccctgcgctgtatccctcctcttgcg
tttggaggactgtcctctcttcgactgctatctctccatggcaacaatatttctgaacta
caccaagaaatcttcagagatgctacatctttatcgcacctggccattggtgcaaaccca
ctgtactgtgactgtcgcctgcactggctctccgactgggtgaaaagtggatacaaggaa
cctggtatcgcccgttgtgcagggccacagggcatggagggcaaactactgcttacaaca
cctggcaataactttcaatgcacaggtcctgtggatccatctgtatctgggaaatgcagc
ccatgttcttcaaacccctgtcagaatgagggcagatgccacaatgaccccgtacatctg
tacaagtgcacctgtccacagggttacaaggggaaaagctgtgaggtccttgttaatgct
tgtgagggaaatccatgtgtaaatggaggaacctgtcacagtgaagaggctagaaaaggc
ttcagctgtatgtgtccactgggatatgatggtcagttctgtgaggtggatgttgatgat
tgtgtggatagcaagtgtgaaaatggcaccatctgtgtggatagagtgggaaactacacc
tgcgtctgtcctcaccccttttcaggccaaaggtgtgaagaatatgaggaagatctgtgt
tatcctggtcaaaatccatgtcatcgcggctccacgtgtataccaaccgtcacaggacct
aaatgcatctgtccacctggttttgtgggcgatgattgcagtgttgattataatgaatgc
gagggacattattgtcagaatggagcgcagtgtgtggatcatgtggctggatattcctgc
atttgcccacaaggttacagtggtcgattatgtgaggtggctctttctctatctggctgt
gagttggtgtactgtgacaatggcgccccctgtgcggagagtgaaggtggtgcattttgt
cagtgtctccctgggtatggagggccacgctgtgaaaagctcctcagtgtcaacttcatt
gacagagattcatacctgctgctaagtgaagtaaaacactggccccagaccaacattact
ctacaggtctccacagctgaggacaaagggattcttctgtacaatggagtcaatgaccac
atcgctgtagagctgcatgaaggacacatcaaagtgacctatgattcaggaaaccagccg
ggcagtgccattttcagctctgaaatagtgaatgatggacagtttcatacagttgagttg
gttacttatgaccggatggtcaacctctccattgatggaggtcttcccacgacactggac
agcctgggacacgtccaacccctcacaaaagatgccccactatatgtagggggtatgcct
gaaaatgcccagtcgctctctttcaaccagtggcctactctcaatggctccagttttcaa
ggctgcatacggaatctctacattaataacgagctgcaggactttactcgtacacagatg
aaacctggagtggtgcctgggtgcctgccctgtcaagaactacgctgtgtgcatggactg
tgccagccaaacactgcggtcgggcctgtgtgccactgtcagccaggctggggtgggcaa
cactgtgatcaggtcctacttgaagctgctaccaacccttgccaaaaaaacaagtgtgtc
catggcacctgtattccagtagacatacaatcctatcactgcaagtgtacagagggtttc
caaggccccctatgcagtcaacagtatgcaacgcccagcccttgcacagcgctttcatgc
caacacggctactgtgagatctcacagacggggcaggcacagtgcatctgtgacagtggc
tacagcggccagttatgtgacttagtagctccttgtcagggcgaatccgtgagggatttc
catcgcatgcgccgtggtgaagtccagtgtcagagcacgcagcccctgtcctgggtggag
tgtcgcggcggctgcagggtggacacgggcttctgctgtaccagcatcaggatacggcgc
agacgatacagttttgagtgcgacgatggcacttcattcacacaggtcgtagaaaagacg
gtagaatgtggctgtgaaaagtgcgtctaa
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integrated database retrieval system
