Myxocyprinus asiaticus (Chinese sucker): 127455346
Help
Entry
127455346 CDS
T08782
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
masi04131
]
127455346
Membrane trafficking [BR:
masi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127455346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
VPS53_C
Motif
Other DBs
NCBI-GeneID:
127455346
NCBI-ProteinID:
XP_051579120
LinkDB
All DBs
Position
17:complement(2754267..2814241)
Genome browser
AA seq
1706 aa
AA seq
DB search
MDPVVCVEIGEDKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKILKVSVIHSKNLLRS
GTLVGSFKLDIGTVYSQPEHQFFHKWAILCDPDDITAGCKGYVKCDIAVVAKGDTIKTPH
KANETEEDDIEGNLLLPEDVPAERQWARFYVKIYRAEGLPKMNTSIMANVKKAFIGENKD
LVDPYVQVQFAGQKGKTSIQKSSYEPIWNEQVIFTEQFPPLCRRMKLQIRDSDKVNDVAI
GTHFIDLQKIANDGDKGFLPTLGPAWVNMYGSTRSYTLMDEYQDLNEGLGEGVSFRARLL
ISLTMEILDTSSPDIMSSTEVQVEGIPNISDNATGKIEEFFLFGCFLEATMIDRKIGDKP
INFEVTIGNYGSELDTPTKPKTKKRKGGDGDEEESELIHGSSDEEEDVDGEVTSVSTTPP
MKPVITDRNYFHLPYFERKPCISIKSWWQDQRRRLYNANIMDNIADKLEEGLNDVQEIIK
TEKAYPERRLRGVLEELSNGCSTFVTLANNDQNPAGRTKLDRERLKSCMHELENMGQQAK
TMRSQVKKSNVRDKIKLAQNFLQKLRFLSDEPQHSIPDIYIWMMSNNKRIAYARVPSKDI
LFSSVEEETGKDCGKVQTIFFKLPGKKSFGPAGWTVQAKTELYLWLGLNRQRKDYLSGLP
NGFEENKAVKGPGIHSSPPISLIYTMKQIFQLRVHMYQARSLFAADSTGLSDPFARIFFS
THSQVTEILNETLCPTWDQLLVFDNVELYGEAGELRDDPPIIVIEIYDQDTVGKAEFMGR
TFAKPLTKMSDEHYGPPRFPPQLEYYQIYRGNCTAGEMLAAFELLQIGPGGKADLPPIDG
PTDIDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSA
LIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTSLRKFI
YRPADKSVNNWSAIEEVVIHTEPEPAVKKMETVVKLDSASDAVIKVDMSDDEKGGKGKKK
RKKGEEVEEEELDESMLDWWSKYFASIETLKEIIKSQEAEAEEKEEFDSGEGGKKSLKTS
SELKGLKKKKKKKTPPCVPGEGAPERKKHKIDELKVYNREIESEFDNFEDWLHTFNLYRG
KCADDADVEQNAADDDRLIGKFKGSLCIYKVPVSDEVSREMGFDSNMGMFQNIPHNDPIN
VLVRVYVIRATDLHPADINGKADPYIAIKLGKSDIKDKENYISKQLNPLFGKSFDIEATL
PMDSTLTVSIYDWDLVGTDDLIGETKIDLENRYYSKHRATCGISASYAIHGYNVWRDPMK
PTQILGKLCKDCKMDAPQYGPGGRVKVANRVYTGPTEIEDENGLKKQTDEHLALAVLNHW
KDIPRIGCKLVPEHVETRPLLNPDKPGIEQGRIEMWVDMFPKDMPAPGPALDISPRKPKK
FELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNW
RFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFSADDFLGAIELDL
NRFPRGAKTAKQCSIDMVLNEQDMPMVNLFKQKRIKGWWPFVARDENDEMEITGKVEAEL
QLLTGEEAEKNPVGEGRNEPEPLEKPNRPDTTFLWFISPLKAIRYLICNNYKWLIIKIVV
VLLILAMLGLFLYSMPGYMVKKLLGA
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtggtatgtgtagaaatcggcgaggataaaaagtacacttcaatgaaggag
tccaccaactgcccctactacaatgagtacttcgttttcgacttccatgttcctcctgat
gtcatgtttgacaagatcctcaaagtgtctgttattcattctaaaaatcttttgcgaagt
ggaactctggttgggagcttcaagcttgacattggaacagtatattcacaacctgaacac
cagttcttccacaaatgggccattttgtgtgaccctgatgacatcactgcaggatgtaaa
ggttacgtcaagtgtgacattgcagttgtcgcaaagggcgacactattaaaactccacac
aaagcaaacgagacagaagaggatgacattgagggaaatcttttgttgccggaagacgtc
ccagctgaacgtcaatgggcaagattctatgtgaaaatttacagagccgaggggttgccc
aaaatgaacaccagcattatggctaatgtcaaaaaagccttcattggagaaaataaggac
ttggttgatccatatgtccaagtgcaatttgcaggacagaagggaaaaacgtccattcag
aagagcagctatgagcccatctggaatgaacaggtcattttcactgagcagtttccacct
ctgtgccggagaatgaagctgcagatccgagactcagataaagtaaatgatgtggccatc
ggaacacatttcattgacctgcagaagattgctaatgatggagacaaaggctttcttccc
actctggggccagcttgggtcaacatgtacggttccacacgtagctacactctcatggac
gagtaccaggacctgaatgaaggactaggggagggggtgtcgttccgggctcgactgttg
atcagtctgaccatggagatacttgacacctcctctcctgatatcatgagctccacagag
gtacaggtggaggggatacccaacatctcggataatgccactggaaagattgaggaattc
tttctatttggatgttttcttgaggccaccatgattgacaggaagattggagacaaaccc
atcaactttgaggttacaataggaaactatggcagtgaacttgatactccaaccaaacca
aaaaccaagaagaggaaaggaggagatggagatgaggaggagtcagagctcattcacggc
tctagtgatgaagaggaggatgttgatggagaggtgacgtcagtgtccacaacgcctcca
atgaaacctgtcatcactgacagaaactatttccatctcccttattttgagagaaaaccc
tgtatctctatcaagagctggtggcaagaccagagaaggcgactttataatgccaacatc
atggacaacatcgcagataaattggaagaaggattaaatgatgtgcaggagatcattaaa
acagagaaagcttatccagagcgcagactcagaggcgtcctggaggagctgagcaatggc
tgcagtacctttgtaacactggcgaacaacgaccagaacccggctgggaggacaaaactg
gaccgtgagaggctgaagtcttgcatgcatgaactggaaaacatgggccaacaagccaaa
acgatgcgatcacaagttaaaaaaagcaacgtgagagacaaaataaaactggcacaaaac
ttcctccaaaagttgagattcctgtctgatgagcctcaacatagcattccagatatttac
atatggatgatgagcaacaacaagcgcatcgcatatgctcgtgttccctccaaagacatt
ctcttttcttctgttgaggaagagaccgggaaggactgtgggaaggtccagacaatcttt
ttcaagcttcctggtaagaagagttttgggccagccggctggactgtacaagccaaaact
gagctgtatctgtggctcggcctgaacaggcagcgtaaggactatttgagcggacttccg
aacgggtttgaggagaataaggcggtcaaagggcctggaattcactcctcaccccccatc
agcctgatctacaccatgaagcagatcttccagttgagggtgcacatgtatcaggctcgt
agtctgtttgcggcggatagcacaggcctgtcagaccctttcgccagaattttcttttct
actcacagtcaagtcacagagatcctgaatgagactctgtgtcctacctgggatcaactg
ctggtgtttgataatgtggagctgtacggtgaagccggtgagctgagagacgatcctccg
ataatcgtcatcgagatctacgatcaggacactgttggtaaagctgaattcatgggcagg
acattcgctaaacctttaaccaagatgtccgatgagcattatggtccaccacgcttccct
cctcagttagagtattaccagatctaccgcggtaactgcactgcaggagaaatgctcgct
gcctttgaactgctgcagattggaccaggtggaaaggctgacctgccccccatagatgga
cctacagatattgaccgcggtcccatcttgcctgttcctatcggcattagacctgtcctg
agtaaatacagaattgaggttctcttctggggtctaagagacttgaagcgagtgaatctg
gctcaagtggatcgccctcgtgtggacatcgagtgcgcagggaagggcgttcaatcagcg
ctcattcagaactacaagaaaaatcccaatttcagcactctggtcaagtggtttgaagtg
gatttgcctgaaaatgaacttcttcaccctcctctgaacattcgtgtggtggactgcagg
gcattcggtcgttatactctggttggctctcatgccgtcacatctctacgcaagttcatt
tacagaccagcagacaagagtgtcaataactggtctgctatagaagaggttgtgatccac
acggaaccagaaccagctgtaaagaagatggagactgtggtcaaactcgactcagcctct
gatgctgtgattaaagttgatatgtcagatgatgagaaaggtggtaaagggaaaaagaag
cgtaagaagggtgaggaagtggaggaagaggagctggatgagagtatgctggactggtgg
tcgaaatacttcgcctccattgagacactgaaagagatcattaaatcacaagaagcagaa
gccgaagagaaggaagagtttgactctggagagggaggtaagaaatctttaaaaacatct
tcggagcttaaagggttaaaaaaaaaaaaaaaaaaaaagactcccccatgtgtgcctgga
gagggcgcaccagagaggaagaagcataaaattgatgagctgaaggtgtacaatagagag
attgaaagtgagtttgacaactttgaagactggcttcacacctttaacctgtatcgagga
aagtgtgcggacgatgctgatgttgagcagaatgcagcagatgacgacagacttattggc
aaattcaagggctccttgtgtatctacaaagttcctgtgtcggatgaagtgtccagagaa
atgggcttcgattccaacatgggcatgttccagaatattccacacaacgatccaataaac
gtccttgtccgagtctatgtcatcagggcaacagatctgcaccctgcagacatcaatggg
aaggcagatccatacatcgccattaaacttggaaagtcagacatcaaggacaaagagaac
tacatctctaagcaactcaaccccttgtttggaaagtcttttgacattgaagcaacactt
ccgatggattccactctcactgtatccatctatgactgggatttggtgggaactgatgac
ctgattggggaaaccaagattgacctggaaaaccggtactacagcaaacacagggcgacg
tgtggtatcagcgccagctatgccattcatggctataatgtgtggagggacccaatgaag
ccaacgcaaatccttggcaaactctgcaaagattgcaaaatggatgcgccacagtacggc
ccaggaggaagagtgaaagttgcaaacagagtttacactggacccactgaaattgaggat
gaaaatggattgaagaaacagacagatgagcatctagctcttgctgtactaaaccactgg
aaagatatcccacggataggctgcaaactcgttccagagcacgtggagacgagacctctt
ctgaatcctgataaacccgggattgagcaggggagaattgagatgtgggtggacatgttt
ccaaaggatatgccagcacctggtccggctctggatatttcaccaagaaagccaaagaaa
tttgagctcagggtgatcgtgtggaatacagatgaagtcgttctggaggatgatgatatc
tttacgggggaaaagtccagtgacatatttgttagaggatggctcaaaggccaacaggag
gacaagcaggacaccgacgtccactatcactcactgaccggagagggcaactttaactgg
cgcttcatttacccctttgactatctacaagcagaagagaaaatcgtcatctccaagaaa
gagtccatgttttcatgggacgagacagagtataaaattcctgcccgactgaatttacaa
gtgtgggatgcggatcatttctctgctgatgacttcctgggcgcaattgaactcgacctg
aatagattccctcgtggggcaaaaacagcgaagcagtgctccattgacatggtcctcaat
gagcaggacatgccgatggtgaacctcttcaaacagaagagaattaaaggatggtggcca
tttgtggcacgagatgaaaatgacgagatggaaattacagggaaagtagaagcagagctg
cagctgctgacgggggaggaggccgagaaaaatcctgttggtgaaggacggaatgaacca
gaacccctcgagaaaccaaaccgccctgacacaaccttcctgtggttcatcagtccactc
aaagcaatccgctacctaatctgcaacaactacaagtggcttatcatcaaaattgtggtg
gttctgttgatattagcgatgctgggcttgtttttgtacagtatgccaggctacatggtg
aaaaaacttctgggtgcttga
DBGET
integrated database retrieval system