Pseudoduganella armeniaca: C9I28_10295
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Entry
C9I28_10295 CDS
T05378
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
masz
Pseudoduganella armeniaca
Pathway
masz01501
beta-Lactam resistance
masz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C9I28_10295
01503 Cationic antimicrobial peptide (CAMP) resistance
C9I28_10295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masz03036
]
C9I28_10295
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_10295
01504 Antimicrobial resistance genes [BR:
masz01504
]
C9I28_10295
Chromosome and associated proteins [BR:
masz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C9I28_10295
Transporters [BR:
masz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C9I28_10295
Antimicrobial resistance genes [BR:
masz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C9I28_10295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
YknX_C
Beta-barrel_RND_2
BSH_RND
RND-MFP_C
BSH_CusB
Biotin_lipoyl
HH_YBHG
HH_EMRA
BSH_LcnD
Beta-barrel_YknX
HH_MFP_RND
Beta-barrel_ALG44
CzcB_C
BSH_YhbJ
OEP
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
AVR96071
UniProt:
A0A2R4C908
LinkDB
All DBs
Position
2368634..2369806
Genome browser
AA seq
390 aa
AA seq
DB search
MLRNTLTALAIAAALIACGKPDGASQAGGPEAAAKDGKDAKKQARLLIAPEDLLTVQSNS
LASGPVITGSIQPERKADLRAEVGAVVLQVLKENGEVVRKGDLLVRLDETSIRDSVTSAE
EAVRSARQVLDQAERMLERNKTLRTSGMTSMQALEDAEVRRNSAQSEVVAAKARLAQARQ
QLERTSVRAPFDGIVSERKVSSGDTAQVGKELIKVIDPSSMRFEGLVSADKIGVVKVGQN
VLFRVNGYPGQNFQGRIKRVDPAANPVTRQVEVLVEFADKLQPRVAGLYAEGRVEAETSN
ALMIPASAMVQAGDSNYVWKIKDNKLAKTNLALGARDERTGMWQVTAGLAAGDLLLRTPG
STVHDGQSVQLTTPKNVASAAQPAAASKGN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaatacccttacagccctcgccatcgccgcggcactgatcgcctgcggcaag
ccggatggcgccagccaggccggtggaccggaagcggccgccaaggacggcaaggacgcc
aaaaagcaggcaaggctgttgatcgcgccggaggatctgctgaccgtgcagtcgaattcg
ctggcttccggccccgtcatcacgggctcgatccagccggagcgcaaggccgacctgcgc
gccgaggtgggcgccgtcgtgctgcaggtattgaaggaaaacggcgaggtcgtgcgcaag
ggtgacctgctggtgcgcctcgacgaaacgtcgatccgcgacagcgtcacgtccgccgag
gaagccgtgcgctcggcgcgccaggtgctggaccaggccgaacgcatgctggaacgtaac
aagacactgcgcacgtcgggcatgacgtcgatgcaggcgctggaggacgccgaagtgcgc
cgcaacagcgcccagagcgaggtggtggcggccaaggcgcgcctggcccaggcccgccag
caactcgagcgcaccagcgtgcgggcgccgttcgacggcatcgtgtccgaacgcaaggtg
tccagcggcgatacggcccaggtcggcaaggagctgatcaaggtgatcgatccgtccagc
atgcgcttcgaagggctcgtctcggccgacaagatcggcgtggtgaaggtgggccagaac
gtgctgttccgcgtgaacggctatccgggccagaatttccagggccgcatcaagcgcgtc
gatccggccgccaacccggtcacgcgccaggtcgaggtgctggtcgaattcgccgacaag
ctgcagccgcgcgtggccggcctgtacgcggaagggcgggtcgaggcggaaacgtcgaac
gcgctgatgattcccgcctcggccatggtgcaggcgggcgacagcaactacgtctggaag
atcaaggacaacaagctggccaagaccaacctggcgctgggcgcgcgcgacgagcgcacc
ggcatgtggcaggtcaccgccggcctggcggcgggcgacctgttgttgcgcacgcccggc
tcgaccgtgcatgacggccagtccgtccagctgacgacaccgaagaacgtggcctcggcc
gcccagccagccgccgcaagcaagggaaactga
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