Pseudoduganella armeniaca: C9I28_21560
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Entry
C9I28_21560 CDS
T05378
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
masz
Pseudoduganella armeniaca
Pathway
masz01501
beta-Lactam resistance
masz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C9I28_21560
01503 Cationic antimicrobial peptide (CAMP) resistance
C9I28_21560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masz03036
]
C9I28_21560
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_21560
01504 Antimicrobial resistance genes [BR:
masz01504
]
C9I28_21560
Chromosome and associated proteins [BR:
masz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C9I28_21560
Transporters [BR:
masz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C9I28_21560
Antimicrobial resistance genes [BR:
masz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C9I28_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
HH_EMRA
BSH_CusB
HH_YBHG
YknX_C
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AVR97935
UniProt:
A0A2R4CE74
LinkDB
All DBs
Position
complement(4939519..4940733)
Genome browser
AA seq
404 aa
AA seq
DB search
MKNTLYSPPLRSAGILFLACAAALTAGCDSHKQAAGPGAGGKMPPPQVGVYTVTPQALPV
VTELPGRTSAYQVAEVRPQVGGIVQKRLFTEGADVKAGTPLYQIDPATYQATYNQAKATL
ARAKANLLTSGPKVARYKELVEIEGVSRQDYEDAVAANAQAKADVESAQAALETARINVE
YTKVSAPISGRIGRSTVTPGALVTAGQAAAMTTVQQLDPIYVDVTQSSEELMRLKRQLES
GGVKKAGEQAKVTLKLADGSTYAQPGKLQFADASVDPATGNVTLRALFPNPKQDLLPGMF
VRAVVENGIDEKAIAVPQQGVTRNPKGEATALVLNAQGLVEQRVLQTAGTLGDKWLVTAG
LAAGDRVIVEGVQKVKPGAPATVAPAAATTAAAKPTAPAAQAVH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacgctctacagcccgccgctgcggtcggccggcatccttttcctcgcatgc
gcggcggcgctgaccgccggctgcgactctcacaagcaggcggccggtcccggcgccggc
ggcaagatgccgccgccgcaggtcggcgtctatacggtgacgccgcaggcgctgcccgtc
gtgacggagctgccgggccgtacgtctgcttaccaggtggccgaggtgcgtccgcaagtg
ggcggcatcgtgcagaaacgcctgttcacggaaggcgccgacgtcaaggccggcacgccg
ctgtaccagatcgatccggccacctaccaggcgacctacaaccaggccaaggccacgctg
gcgcgcgccaaggcgaacctgctgacctcgggcccgaaagtggcgcgctacaaggaactg
gtcgagatcgaaggcgtcagccgccaggattacgaggacgcggtcgccgccaacgcgcaa
gcgaaggcggacgtggaatcggcccaggccgcgctggagacggcccgcatcaacgtcgaa
tacaccaaggtgtcggcaccgatttccggccgtatcggccgttcgaccgtgacgccgggc
gcgctggtcacggcaggccaggccgccgccatgacgaccgtgcagcagctcgacccgatc
tatgtggacgtgacgcagtccagcgaagagctgatgcgcctgaagcgccagctcgaatcg
ggcggcgtgaagaaggccggcgagcaggccaaggtcaccttgaagctggccgacggcagc
acctatgcccagccgggcaagctgcagttcgccgacgccagcgtcgatccggccaccggc
aacgtgaccttgcgcgcgctgttcccgaacccgaagcaggatctgctgccgggcatgttc
gtgcgcgccgtggtggaaaacggcatcgacgagaaagccatcgccgtgccgcagcagggc
gtgacccgcaatccgaaaggcgaggcgacggcgctggtgctgaacgcgcagggcctggtc
gagcagcgcgtgctgcagacggccggcacgctgggcgacaagtggctggtgacggccggt
ctcgccgccggcgaccgcgtgatcgtcgagggcgtgcagaaggtcaagccaggcgccccg
gccaccgtggcgccggccgccgccaccaccgcggccgccaagcccacggccccagcggct
caagcggtccattaa
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