Pseudoduganella armeniaca: C9I28_23455
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Entry
C9I28_23455 CDS
T05378
Name
(GenBank) RND transporter
KO
K18903
outer membrane protein, multidrug efflux system
Organism
masz
Pseudoduganella armeniaca
Module
masz_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
masz02000
]
C9I28_23455
01504 Antimicrobial resistance genes [BR:
masz01504
]
C9I28_23455
Transporters [BR:
masz02000
]
Other transporters
Pores ion channels [TC:
1
]
C9I28_23455
Antimicrobial resistance genes [BR:
masz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
C9I28_23455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LPAM_1
ASY3-like
Motif
Other DBs
NCBI-ProteinID:
AVR99360
UniProt:
A0A2R4CIR2
LinkDB
All DBs
Position
complement(5373694..5375136)
Genome browser
AA seq
480 aa
AA seq
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MKKISLAVASATLLLSGCATVGNDFKAPANVAAPTFSNAAGDAAAAHLPREWWSVFGDAT
LAELEQRALRDSPTVQAAAQRLLQGEAQLGVVRANEGPQLNVSAGVSNSRTSANTSQGIA
LGRRAISGNNYSVGTGFSYEIDLLGRVRRAVEAADAQALAAQADRDGVLTMLTTQVATTY
FQLRGLDAEMAILRGALDTRRETEQLVTARFEAGLSNELDTARARIERANAEADLEEVQR
QRNALEHGLAVLLGASPTTPVLPAAQGARLPQPPAIPVGLPASLLGQRPDLAASVASLKA
ANAQVGVAEGAFYPSVSLTGNFGFASESLSEIAKGGSRQFSFGPLAVSLPILDGGRNKAN
LAAAKARYEEAVANHQERLLTALREVEDALSDVRQKQQQDKVQGVSREAAQRAYLVARAR
YERGLSTYLDVTDAQRSALAADRAGVQIGTQRLLAAVSVARALGAGWQPEGRLATLAQAR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatctcgctggccgtcgcttcggccaccctgttgctgtccggttgcgccacc
gtgggcaacgacttcaaggccccggccaacgtcgcggccccgaccttcagcaatgccgcc
ggcgacgccgccgcggcgcacctgccgcgcgagtggtggagcgtgttcggcgacgccacc
ctggccgagctggaacagcgcgcactgcgcgacagcccgaccgtgcaggcggcggcgcag
cgcttgctgcagggcgaagcgcagctgggcgtcgtacgtgccaacgaagggccgcagctg
aacgtcagcgcgggcgtgtcgaattcgcggacgtcggccaacacctcgcagggtatcgcg
ctgggccggcgcgccatcagcggcaacaactactcggtcggcaccggcttctcgtacgag
atcgacctgctgggccgcgtgcgccgcgccgtcgaagcggcggacgcgcaggcgctggcg
gcgcaggccgatcgcgacggcgtcttgacgatgctgacgacgcaggtggcgaccacttat
ttccagctgcgcggcctggatgccgagatggcgattttgcgcggtgcgctcgatacccgc
cgcgagaccgagcagctggtgacggcgcgcttcgaagccgggttgtcgaacgaactggat
acggcgcgcgcccgtatcgagcgcgccaacgcggaagcggacctggaggaagtgcagcgc
cagcgcaacgcgctggaacacggcctggccgtgctgctgggtgcctcgcccacgacacca
gtattgccggccgcgcagggcgcgcggttgccgcagccgcccgccattccggtcggcctg
ccggccagcctgctgggccagcggcccgacctggcggccagcgtggccagtttgaaggcg
gccaatgcgcaggtaggcgtggccgaaggggcgttctatccgtccgtctcgctgacgggg
aacttcggcttcgcttccgagagcctgtccgagatcgccaagggcggctcgcgccagttc
agctttgggccgctggcggtgtcgctgccgatcctggatggcggccgcaacaaggccaac
ctggccgccgccaaggcgcgctacgaggaagccgtcgccaatcaccaggagcgcctgctc
acggcgctgcgcgaagtcgaggacgcgctgtcggacgtgcgccagaagcagcagcaggac
aaggtgcagggcgtgtcgcgcgaagcggcgcagcgcgcctacctggtggcgcgcgcccgc
tacgagcgcggcctgtcgacctacctggacgtgacggacgcccagcgcagcgcgctggcc
gccgaccgggccggcgtgcagatcggtacgcagcgcctgctcgccgccgtctccgtcgcc
cgcgccctgggcgccggctggcagccggaaggccggctggcaacgctggcgcaggcccgc
tga
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