Molothrus ater (brown-headed cowbird): 118687779
Help
Entry
118687779 CDS
T11569
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate04620
Toll-like receptor signaling pathway
mate04621
NOD-like receptor signaling pathway
mate04622
RIG-I-like receptor signaling pathway
mate05164
Influenza A
mate05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118687779 (TRAF3)
04621 NOD-like receptor signaling pathway
118687779 (TRAF3)
04622 RIG-I-like receptor signaling pathway
118687779 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118687779 (TRAF3)
05168 Herpes simplex virus 1 infection
118687779 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
zf-C3HC4
CCDC18_2nd
Cast
MPS2
ATG16
zf-C3HC4_2
CEP104_ZnF
Med28
ODF2_N
Sina_ZnF
Rod_CreS
Spc29
NOCA1_mid
zf-RING_UBOX
Tropomyosin
KxDL
GAS
DUF1664
zf-RING_6
HrpB7
SPATA24
BLOC1_2
T4SS_LegC2C7
SNARE
Motif
Other DBs
NCBI-GeneID:
118687779
NCBI-ProteinID:
XP_036240796
LinkDB
All DBs
Position
6:52174128..52244187
Genome browser
AA seq
567 aa
AA seq
DB search
MDPSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagtaagaagtcagaaccccctttatctgtagaaatggtacagcagagggcc
aatcctgaccgcagtccatcagcatccatctatgttccagagcaaggtggctacaaagag
aaatttgtgaatgccgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacaggttctgtgaaacctgcatgaatgccttgctg
agatcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgaaaac
aagggctgtaaggaacagctatctttgggtcaattactgatgcatttgaggactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatattgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcacgatcagatgctgagcgttcacgacatccgcctggctgac
atggacctgcgcttccaggtgctggaaaccgcgagttacaacggcgtgttaatttggaaa
atccgagactataaacgtcggaagcaagaagcagtcatggggaagactctgtccctgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagggtttatctgaac
ggggatggcatgggaaaggggacgcacttgtctctgttttttgtcatcatgcgtggagaa
tacgatgctttgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgccacttgggagatgctttcaagccagatccgaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
DBGET
integrated database retrieval system
