Molothrus ater (brown-headed cowbird): 118692668
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Entry
118692668 CDS
T11569
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
mate Molothrus ater (brown-headed cowbird)
Pathway
mate00514
Other types of O-glycan biosynthesis
mate04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
mate00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118692668 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118692668 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mate01003
]
118692668 (LFNG)
Enzymes [BR:
mate01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118692668 (LFNG)
Glycosyltransferases [BR:
mate01003
]
Glycan extension
O-Glycan
118692668 (LFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
118692668
NCBI-ProteinID:
XP_036248528
LinkDB
All DBs
Position
16:complement(4414768..4425924)
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AA seq
367 aa
AA seq
DB search
MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAAAAVAPPAA
QGPPGLRSFADYFGRLSRARRELPPAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLEL
LLDTWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESG
RKWFCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWF
ATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFH
SHLENLHQVPKSEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPW
CPTNMVY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcctgtccctcgtgggctccatgttcacctgc
ctgctggtgctcatggtggagccgccgggcaggccggggctggcccggggggaggccggc
ggagcgcagcgggcgctgcagagcctgggggcggcggcggccgtggctcctccggcggcg
caggggccgcccgggctccgcagcttcgccgattacttcgggcggctgagccgagcgcgg
cgggagctgcccccggccccgccgagccccccgcggccgccggccgaggacatctccccc
cgcgatgtcttcatcgccgtcaagaccaccaaaaagtttcacaaggcgcggctggagctg
ctgctcgacacctggatctcccgcaaccgcgacatgaccttcatcttcactgacggggag
gatgaggagctgaagaagcaagcacgaaacgtcatcaacaccaactgctcggctgcccac
agccgccaggcgctgtcctgcaagatggccgtggagtacgacaagttcatcgagtccggc
agaaagtggttctgccacgtggacgatgacaactacgtgaacgtgcggatgctggtgaag
ctgctctccagctacccccacacacaggacatctacatcgggaagcccagcctggaccgg
cccatccaggccacggagaggatcagtgagaacaagatgcatcctgtgcatttctggttt
gccacgggtggagcagggttctgtatcagccgggggctggcactgaagatgagcccttgg
gccagtgggggtcacttcatgagcactgcagagaagattcgcctgcctgacgactgcacc
atcggctacatcatcgagtctgtgctgggcgtgaagctcatccggagcaacctcttccac
tcccacctggagaacctccaccaggtgcccaagtcggagatccacaaacaggtgacactg
agctatggcatgttcgaaaacaagcgcaactccatccacatgaagggagccttctctgtc
gaggaggacccatccaggttccgctccgtgcactgcctgctgtaccctgacacgccgtgg
tgccccaccaacatggtttactag
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integrated database retrieval system
