Mesocricetus auratus (golden hamster): 101822467
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Entry
101822467 CDS
T08306
Symbol
Eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101822467 (Eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101822467 (Eftud2)
Spliceosome [BR:
maua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101822467 (Eftud2)
Complex C
U5 SnRNP specific factors
101822467 (Eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101822467
NCBI-ProteinID:
XP_040605738
UniProt:
A0ABM2XU34
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDEDEDDVGEHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLTL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaatttgggaattatattggaccagagcttgattctgat
gaagatgacgatgaattgggaagagagacaaaagatcttgatgagatggatgatgatgag
gacgaggatgacgttggagagcacgatgacgaccaccctgggatggaggttgtgctgcat
gaggacaagaagtactaccccacagctgaggaggtgtacggccccgaggtggagaccata
gttcaggaggaggacacgcagcctctcacagaacccattataaagccagtgaaaaccaag
aaattcactctgatggagcagacgttgcctgtcacggtgtatgagatggatttcttagct
gatctgatggacaactcagagctcatccgaaacgtgaccctgtgtggccatctccaccac
ggcaagacgtgttttgtagattgcttaatagagcagactcatccggaaatcagaaaacgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaagagcactcctgtgacagtcgtgctgccggataccaaagggaagtcttacctgttc
aacatcatggacacaccaggacatgtgaatttttctgatgaggtcacagctggcttgcga
atctcagatggagtggtccttttcattgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcatgcagtgcaggaaaggttagctgtcactgtgtgcatcaacaaaatc
gaccggctgatcctggaactgaagctgcctccaacagatgcttattacaaacttcgacac
attgtggatgaggtcaatggattaataagcatgtattccaccgatgagaacctgaccctt
tcgccactcctgggcaacgtctgcttttccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctatgccgacacctttggtgacattaactaccaggagtttgct
aaaagactctggggtgacatctacttcaatcccaagacgagaaagttcacaaaaaaggct
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcccctgtataagatc
cttgctcaggtggtgggcgatgtggataccagcctgccaaggaccctggacgagctcggc
atccatctgaccaaggaggagctgaagctgaacatccgccctctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcacattccatct
ccaaaggtgggcgccaaacccaagatcgagcacacatacactggcggcgtggactccgac
cttggcgaggccatgagtgactgtgacccagacggtcccttgatgtgtcacactactaag
atgtacagcacagatgacggagttcagtttcatgcctttggccgggtactgagtggcacc
atccatgctgggcagcctgtgaaggtgctgggggagaactacactctggaagatgaggaa
gattcgcagatatgtaccgtgggccgcctttggatctcggttgccaggtaccacattgaa
gtgaatcgtgttcctgctggcaactgggttctgattgaaggcgtcgatcagccaatcgtg
aagacagcaaccataactgagccccgaggcaatgaggaggctcagattttccggcccttg
aaattcaataccacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaaaatgctcgatggcctgcgcaaggtcaacaagagctatccatctctcaccaccaag
gtagaagagtctggcgagcacgtgatcctgggcactggggagctctacctggactgtgtg
atgcacgatctgcggaagatgtactcagagatcgacatcaaggtggctgacccagttgtg
acgttctgtgagacagtggtagaaacatcctccctcaaatgctttgctgagacacccaat
aagaagaacaagatcaccatgatcgctgagcctctggagaagggcctggctgaggacatc
gagaacgaagtggtccagatcacctggaacaggaagaagctgggagagttcttccaaaca
aagtatgactgggatctgctggctgcccgttccatctgggccttcggtcctgatgctaca
ggaccaaacatcctagtggacgacacattgccctcggaggtggacaaagcacttcttggc
tcagtgaaggacagcattgttcaaggtttccagtggggaacccgtgagggacctctctgc
gatgaattgatccggaatgtcaagtttaagatcctagatgccgtggttgcccaggaacct
ctccatcggggcggaggccagatcattcccacagctaggagggtggtctactctgccttt
ctcatggccactcctcgtctgatggaaccttactactttgtagaggtccaggcccctgcg
gactgtgtgtctgctgtctacacagtcctggccaggcgcagggggcatgtgactcaggat
gcacccataccaggctcccctctctacaccatcaaagctttcatcccagccatcgactct
ttcggctttgagactgatctccgcacgcatacccaggggcaggccttttccctgtctgtc
ttccatcactggcagatcgtgcctggtgatcctctggacaagagcattgtcatccgccca
ttggagccacagccagcccctcacctggcccgggagttcatgatcaaaacccgtcgtagg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgatgatcctatgttgctggag
cttgccaaacaggacgttgtgctcaattatcccatgtga
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