Mesocricetus auratus (golden hamster): 101830563 Help Entry 101830563         CDS       T08306                                  Symbol Traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism maua  Mesocricetus auratus (golden hamster) Pathway maua04010   MAPK signaling pathway maua04064   NF-kappa B signaling pathway maua04120   Ubiquitin mediated proteolysis maua04140   Autophagy - animal maua04144   Endocytosis maua04380   Osteoclast differentiation maua04620   Toll-like receptor signaling pathway maua04621   NOD-like receptor signaling pathway maua04622   RIG-I-like receptor signaling pathway maua04657   IL-17 signaling pathway maua04722   Neurotrophin signaling pathway maua04936   Alcoholic liver disease maua05132   Salmonella infection maua05133   Pertussis maua05135   Yersinia infection maua05140   Leishmaniasis maua05142   Chagas disease maua05145   Toxoplasmosis maua05152   Tuberculosis maua05160   Hepatitis C maua05161   Hepatitis B maua05162   Measles maua05168   Herpes simplex virus 1 infection maua05169   Epstein-Barr virus infection maua05170   Human immunodeficiency virus 1 infection maua05171   Coronavirus disease - COVID-19 maua05200   Pathways in cancer maua05222   Small cell lung cancer maua05235   PD-L1 expression and PD-1 checkpoint pathway in cancer maua05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:maua00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101830563 (Traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     101830563 (Traf6)    04064 NF-kappa B signaling pathway     101830563 (Traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     101830563 (Traf6)    04140 Autophagy - animal     101830563 (Traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     101830563 (Traf6)    04621 NOD-like receptor signaling pathway     101830563 (Traf6)    04622 RIG-I-like receptor signaling pathway     101830563 (Traf6)    04657 IL-17 signaling pathway     101830563 (Traf6)   09156 Nervous system    04722 Neurotrophin signaling pathway     101830563 (Traf6)   09158 Development and regeneration    04380 Osteoclast differentiation     101830563 (Traf6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101830563 (Traf6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     101830563 (Traf6)   09162 Cancer: specific types    05222 Small cell lung cancer     101830563 (Traf6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     101830563 (Traf6)    05161 Hepatitis B     101830563 (Traf6)    05160 Hepatitis C     101830563 (Traf6)    05171 Coronavirus disease - COVID-19     101830563 (Traf6)    05162 Measles     101830563 (Traf6)    05168 Herpes simplex virus 1 infection     101830563 (Traf6)    05169 Epstein-Barr virus infection     101830563 (Traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     101830563 (Traf6)    05135 Yersinia infection     101830563 (Traf6)    05133 Pertussis     101830563 (Traf6)    05152 Tuberculosis     101830563 (Traf6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     101830563 (Traf6)    05140 Leishmaniasis     101830563 (Traf6)    05142 Chagas disease     101830563 (Traf6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     101830563 (Traf6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     101830563 (Traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:maua04131]     101830563 (Traf6)    04121 Ubiquitin system [BR:maua04121]     101830563 (Traf6) Enzymes [BR:maua01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101830563 (Traf6) Membrane trafficking [BR:maua04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     101830563 (Traf6) Ubiquitin system [BR:maua04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     101830563 (Traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 SlyX zf-TRAF_2 zf-RING_5 Sina_ZnF PspA_IM30 TRAF3_RING zf-RING_11 RING_XB3-XBAT31 DUF4455 U-box DUF16 UPF0242 Spc29 Med21 EzrA DUF7310 PKcGMP_CC Motif Other DBs NCBI-GeneID:  101830563 NCBI-ProteinID:  XP_012973610 UniProt:  A0A1U8C5B2 LinkDB All DBs Position Unknown AA seq 530 aa AA seqDB search MSLLHCENSCGSNQSSSDCCAAMATSCSAAVKDDSVSVSASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCLQKMELRHLEDHQAHCEFALMNCPQCQRPFQKCHFHMHIIE DCPRRQVSCVNCAVSMPFEEKEIHDQTCPLANIICEYCGTVLIREQMPNHYDLDCPTAPI PCSFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHNVNLTLHSCDTSSPSRGCCPED PNYEETIKQLESRLVRQDHQIRELTAKMETQSIHVSELKRTIRTLEDKVAEMEAQQCNGI YIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH TMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFG YVTFMHLEALRQGTFVKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt atgagtctgttacactgtgaaaacagctgtgggtccaaccaatcctcaagtgactgttgt gctgccatggccacctcctgcagtgctgcagtgaaagatgacagtgtgagtgtatctgcc agcacggggaacctctccagctccttcatggaagagatccagggatatgatgtggagttt gacccacctttggaaagcaagtacgaatgccccatctgcttgatggctttacgggaagct gtgcaaacaccatgtggccacaggttctgcaaagcctgcatcatcaaatccataagggat gcaggtcacaaatgtccagtcgataatgaaatactgctggaaaatcaactgtttcctgac aatttcgcaaagcgagagattctgtccctgacggtaaagtgcccaaataaaggctgtttg caaaagatggagctgagacatctcgaggatcatcaagcacattgtgaatttgctcttatg aattgcccccaatgtcaacgtcctttccaaaagtgccactttcatatgcacatcatcgag gattgtcccaggagacaggtttcttgtgtaaactgtgctgtgtccatgccatttgaagag aaagagatccatgatcagacctgtcctttggcaaatatcatctgtgaatactgtggtaca gtcctcatcagagaacagatgcctaatcattatgatctagactgcccaacagctccaatc ccttgctcattcagtgtttttggctgtcatgagaagatgcagagaaatcacctagcacga cacctgcaagagaatactcagttgcacatgagattgttggcccaggctgttcataatgta aacctcactttgcattcatgtgatacttcttctccatcccggggatgttgtccagaggac ccaaattatgaggaaactatcaaacagttggaaagtcgcctagtaagacaggaccatcaa atccgggaactgactgccaagatggaaactcagagtatccatgtaagcgagctcaaacga accatccgtacccttgaggacaaagttgctgaaatggaagcacaacagtgtaacgggatt tatatctggaagattggcaactttgggatgcacttgaaatcccaagaagaggagaagcct gttgtcattcatagccctgggttctacacaggcagacctgggtacaagctgtgcatgcgc ctgcaccttcagctaccaacagctcagcgctgtgcaaactatatatccctgtttgtccac accatgcaaggagagtatgacagccatctcccctggcccttccagggcaccatacgcctt acaattcttgatcaatctgaagcagtaataaggcaaaaccacgaagaggtcatggatgct aaaccagagctgcttgcctttcagcgtcccacaatcccacggaaccccaaaggttttggc tatgtaacatttatgcacctggaagccttaagacagggaaccttcgttaaggatgacaca ttattagtacgctgtgaagtctctactcgctttgatatgggtggccttcggaaggagggt ttccagccacgaagtactgatgcaggagtgtaa

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