KEGG   Mesocricetus auratus (golden hamster): 101832694
Entry
101832694         CDS       T08306                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3 isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
maua  Mesocricetus auratus (golden hamster)
Pathway
maua03250  Viral life cycle - HIV-1
maua05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:maua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101832694
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101832694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maua03019]
    101832694
Messenger RNA biogenesis [BR:maua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101832694
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase AID MafB19-deam Hairy_orange Bd3614-deam
Other DBs
NCBI-GeneID: 101832694
NCBI-ProteinID: XP_012966578
UniProt: A0A1U8BSR7
LinkDB
Position
Unknown
AA seq 414 aa
MQPQREGSRTGMEPACLGCYHRKPYSPIRNPIKMLYERTFYFHFKNLHYANGRKNTFLCF
EVNRMECGELVPLCQGVFRKESSNLHAEVCFLYWFHTQVLGMLPPGEKYKITWYMSWSPC
SECAAEVTRFLDTHRNLSLAIFSSRLYYFWKSDYQDKLRRLNQAGAQIAAMDFPEFEKCW
NKFVDNDGKSFRPWKRLKINFRNQDSTLWDILRGPVSLLTEDIFYMQFSNRHRVQPVQQR
RYYQRKTYLCYLLEPYNDQQPLKGCLQNKKDKHAEILFIDKMRSLELCQVRITCYLTWSP
CPNCAQELAAFKKDHPDLVLRIYTSRLYFHWRRKYQEGLCSLWRSGIQVDVMDLPQFTDC
WTNFVSSQSPFRPWNNLEKNSRCIQRRLQRIKESWGLQDLMNGLGNLQLGPPLS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgcaaccccagcgcgaggggtccagaactgggatggaaccagcctgcctgggatgctac
catcgcaaaccctattcaccgatcagaaacccgataaagatgttatatgaaagaacattc
tacttccacttcaagaacctccactatgccaacggtcgaaagaataccttcttgtgcttc
gaagtgaataggatggagtgcggtgaacttgtccccctttgccaaggggtctttagaaaa
gagagcagcaacctccatgctgaagtgtgcttcctctactggttccacacccaagtgctg
gggatgctgccccctggtgaaaagtacaagatcacctggtatatgtcctggagcccctgc
agtgagtgtgcagcggaagtgaccaggttcctggacacacaccgcaacctgagtctggcc
atcttcagctcccgcctctactacttttggaagtcggactaccaggacaagcttcgcaga
ctgaatcaggcaggagcccagatagctgccatggacttcccagaatttgaaaagtgttgg
aacaagtttgtggacaatgatggcaagtcattcaggccctggaagagacttaaaataaat
tttaggaaccaggattccacgctttgggatattctcaggggcccggtgagtctgctgaca
gaagacatattctacatgcagtttagcaataggcaccgggtccagccagtccagcagcgt
cgttactaccaaaggaagacctacctgtgctacctgctggagccgtacaatgaccaacag
ccactcaaaggctgcctgcagaacaagaaagataaacacgcagaaatcctcttcattgat
aagatgcgttccttggaactctgccaagtgcgaatcacctgctacctcacatggagcccc
tgcccgaactgtgcccaggaactggctgcattcaaaaaggatcacccagacctggttctg
cgcatctacacctcgcgtctgtacttccactggaggaggaagtaccaggaggggctgtgt
tctctgtggcgatcagggatccaggtggacgtcatggacctcccgcagtttactgactgc
tggacaaactttgtgagctcccaaagcccgttccggccgtggaataatctggagaaaaac
agcaggtgcatacaacgaaggctccagaggatcaaggagtcctggggtctgcaagatttg
atgaatggccttggaaatctacaacttggacccccattgtcctga

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