Mesocricetus auratus (golden hamster): 101838597
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Entry
101838597 CDS
T08306
Symbol
Ddx58
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04064
NF-kappa B signaling pathway
maua04622
RIG-I-like receptor signaling pathway
maua04623
Cytosolic DNA-sensing pathway
maua05160
Hepatitis C
maua05161
Hepatitis B
maua05162
Measles
maua05164
Influenza A
maua05168
Herpes simplex virus 1 infection
maua05169
Epstein-Barr virus infection
maua05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101838597 (Ddx58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101838597 (Ddx58)
04623 Cytosolic DNA-sensing pathway
101838597 (Ddx58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
101838597 (Ddx58)
05160 Hepatitis C
101838597 (Ddx58)
05171 Coronavirus disease - COVID-19
101838597 (Ddx58)
05164 Influenza A
101838597 (Ddx58)
05162 Measles
101838597 (Ddx58)
05168 Herpes simplex virus 1 infection
101838597 (Ddx58)
05169 Epstein-Barr virus infection
101838597 (Ddx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maua04054
]
101838597 (Ddx58)
Enzymes [BR:
maua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101838597 (Ddx58)
Pattern recognition receptors [BR:
maua04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
101838597 (Ddx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
Motif
Other DBs
NCBI-GeneID:
101838597
NCBI-ProteinID:
NP_001297482
EnsemblRapid:
ENSMAUG00000019231
UniProt:
A0A0G2YNC7
LinkDB
All DBs
AA seq
925 aa
AA seq
DB search
MTAEQRQNLQAFGDYVRKTLDPTYILSYMSPWLQDDEVQYIQAEKNNKGPMEAASLFLRY
LLQLQTDGWFQAFLDALYHAGYCGLYEAIESWDFQKIEKLEEHRLLLRRLQPEFKARINP
TDILSEMSECLINQECEEIRQICFTKGMMAGAEKMVECLLRSDKENWPKVLKFALEKEDN
KFGDLWIVDEGSKRLESKAVEDDDGMEMSSIQIFIQEEPECQDLSQNPCLPSDESCNNLH
SSLKPRNYQLELALPAQKGKNTLICAPTGCGKTFVSLLICEHHLKSFPHGQKGKVVFFAN
QIPVYEQQATVFSRHFERLGYSVAGVSGATTENVSVQHIIENYDIIILTPQILVNSLNNG
TIPSLSVFTLMIFDECHNTSKHHPYNQIMFRYLDQKLGQSPDPLPQVIGLTASVGVGDAK
TVDEAMFHICRLCAALDVSVIATVRDNAEELEQVVYKPQKIFRKVESRTANTFKSIISQL
MRETEKLAKNASEELGKLFQIQNREFGTQKYEQWIVAVHKACMVFQMADKEEESRICRAL
FLYTSHLRKYNDALIISEDAQMKDALNYLKAFFHDVREAAFDETEQDLTRNFEEKLEELE
KVSMDPSNENPKLRDLYLILQEEYHLKPETKTILFVKTRALVDALKKWIEENPALGFLKP
GILTGRGKTNQATGMTLPAQKCVLEAFRTSGDNNILIATSVADEGIDIAQCNLVILYEYV
GNVVKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMFKEKIMNESISRLQAWDEFEKKV
HQIQLDEKFIRDSQHKPQPAPDKENKKLLCGKCKAFACYTADIRVVEKSHYTVVGKAFKE
RFVSKPHPKPKIYDSFEKKAKIFCAIQNCCHDWGIQVKYKMFEIPVIKIESFVVEDIASG
AQNRHSKWKDFRFERIQFDPAEMSN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaacagcggcagaatctgcaagcattcggagactatgtcaggaagactctg
gaccccacctacatcctcagctacatgagtccctggctccaggatgatgaggtccagtac
atccaggctgagaaaaacaacaagggtcccatggaggctgcctcactgttcctccggtac
ctgctgcagctacagacagatggctggttccaggcctttttggatgccctgtaccacgca
ggttactgtggactttatgaagccatcgaaagttgggatttccaaaaaattgaaaagtta
gaggaacacagattacttttacgacgtttacagccagaatttaaggccagaatcaaccca
acagatattctttctgaaatgtctgaatgcttaattaatcaagaatgtgaagaaatcaga
cagatctgcttcacgaaaggcatgatggcaggcgcggagaagatggttgaatgtcttctc
agatccgataaggagaactggcccaaggttttgaaatttgctttggagaaagaagacaac
aagtttggtgacctgtggattgttgacgaaggttccaaaaggcttgaaagtaaagctgtt
gaagatgatgatggaatggagatgtccagcatacagatttttatacaggaagagccagaa
tgccaggatctcagtcaaaatccctgcctaccatcagacgaatcatgtaataatttgcac
agctccttgaaaccaaggaattatcaactggagcttgctctgcctgcacagaaagggaaa
aatacactaatatgtgctcctactggttgtgggaaaacctttgtgtcacttctcatatgt
gagcatcatcttaaaagcttcccacatggacaaaaagggaaagtggtcttttttgctaac
caaattcctgtctacgaacagcaggcaactgtgttctctcgccattttgaaagacttggg
tacagcgtagcaggcgtttctggggcaaccactgaaaatgtctcagtgcagcacattatt
gaaaactatgacatcatcatcctgacaccccagattcttgtgaacagtctcaacaatgga
accatcccctcgctgtccgtcttcaccttgatgatatttgatgaatgccacaacaccagt
aaacaccacccgtacaatcagatcatgttccggtacctagatcaaaagcttggacagtcg
ccagacccactgcctcaggtcattgggctgactgcctccgttggtgttggagacgccaaa
accgtagatgaagccatgttccacatctgcagactctgcgccgccctggatgtgtccgtg
atagccacggtcagggacaacgcggaagaactggagcaggttgtttataagccccagaag
atttttaggaaagtggaatcgcggactgcaaacacatttaagtccatcatatctcagctg
atgagggagacagagaaactggcaaagaatgcctcggaggaacttggaaagttatttcaa
attcaaaatagggagttcggcacccagaaatacgaacagtggattgtcgcagtccacaaa
gcatgcatggtgttccagatggcggacaaggaggaggagagcaggatttgcagagcgctc
tttctgtacacatcacacttacggaaatacaacgatgctctcatcatcagtgaggacgca
cagatgaaagatgctcttaattaccttaaagccttcttccacgatgtccgagaagcagca
tttgatgagaccgagcaagatcttacgcggaactttgaagagaagctggaagaactagaa
aaagtttccatggatcccagcaatgagaaccctaaactcagagacctctacttgatctta
caagaggagtaccacttaaagccggagaccaaaaccattctcttcgtgaaaaccagagcc
cttgtggatgctttaaagaaatggattgaagaaaatcctgcactgggctttctaaaacct
ggcatattgactggacgtggcaaaacaaaccaggcaacaggaatgacactcccagcacag
aagtgtgtgttagaagcattcagaaccagtggggataacaacattctgattgctacctcg
gtcgctgatgaaggcattgacattgctcagtgcaacctggtcattctttatgaatatgtg
ggcaatgtcgtcaaaatgatccaaaccagaggcagaggaagagcaagagatagtaagtgc
ttcctcctgacgagcagtgctgacgtgattgaaaaagaaaaggcgaacatgttcaaggaa
aaaataatgaatgaatccatttcaagacttcaggcatgggatgaatttgaaaaaaaggtt
caccagatacagttggatgaaaagttcatcagagacagccagcacaaaccacaacctgcc
cctgataaggagaataagaaactgctgtgtgggaagtgcaaggcctttgcgtgctacaca
gctgacatccgggtggttgagaaatcccactacaccgtcgttggaaaggcttttaaggag
cgctttgtgtctaagccacaccctaaaccaaagatctatgatagcttcgagaagaaagca
aaaatattctgtgccatccagaactgctgccacgactggggaattcaagtgaaatacaag
atgttcgagattccagtcataaaaattgaaagctttgtggtggaagatattgcaagtgga
gctcagaaccggcactcaaagtggaaggacttccgttttgaaagaatacagtttgaccct
gcagaaatgtctaactga
DBGET
integrated database retrieval system
