Mesocricetus auratus (golden hamster): 101839594
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Entry
101839594 CDS
T08306
Symbol
Kdm2b
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101839594 (Kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maua03000
]
101839594 (Kdm2b)
04121 Ubiquitin system [BR:
maua04121
]
101839594 (Kdm2b)
03036 Chromosome and associated proteins [BR:
maua03036
]
101839594 (Kdm2b)
Enzymes [BR:
maua01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
101839594 (Kdm2b)
Transcription factors [BR:
maua03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101839594 (Kdm2b)
Ubiquitin system [BR:
maua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101839594 (Kdm2b)
Chromosome and associated proteins [BR:
maua03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101839594 (Kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
101839594 (Kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
AppA_SCHIC
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
101839594
NCBI-ProteinID:
XP_040587478
UniProt:
A0A3Q0D8Q3
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MEAEKDSGRRLRAIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLVFRDKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNALAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRELMLI
DAPRKASVDGFSSDSWLEMEEESCEQQSQEEEEEEKEEEGDGADKTPRPSTDGPTSPSST
RSEEQENTGKKPKAPAMQFLKRTLSNESEESVKSTTMPIDYPKTPTGSPSTEVSTKWTHL
TEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHVDDDPSLAITGVPV
VSWPKKTPKNRVVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHF
CKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECS
ICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLPGS
LLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPADGILRRKSDDVHLRRKRKY
EKPQELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFR
KKRRSWKNAEDRLALANKPLRRFKQEPEDDLPEAPPKSRESDQSRSSSPTAGPSTEGAEG
PEEKKKVKMRRKRRLPNKELSKELSKELNHEIQKTESTLAHENHQPIKSEPESENEEPKR
PLSHCERPHRFSKGLNGTPRELRHPLGPGLRSPPRVISRPPPSSSPPKCIQMERHVIRPP
PISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRID
LNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSA
LCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDIT
DASLRLIIRHMPLLSKLQLSYCNHVTDQSINLLTAVGTTTRDSLTEIVLSDCNKVTDQCL
SFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgtgcgattgaccgccagagatacgac
gaaaacgaggacttgtcggacgtggaggaaatcgtcagcgtccgtggcttcagcctggag
gagaagctacgtagccagctgtaccagggggacttcgtgcatgccatggagggcaaagat
tttaactatgagtacgtacagagagaagctctcagggttcccctggtttttcgagacaag
gatggactaggaatcaagatgccagaccctgatttcacggtcagagacgtcaaactcctt
gtggggagtcggcggttggtggatgtgatggacgtgaacacccagaagggtaccgagatg
agcatgtcccagttcgtacgctactacgagacaccagaggcccagcgggacaaattgtac
aacgtcatcagcctcgagttcagtcatacgaagctggagcacctggtcaagcgccccact
gtggtggacctggtggactgggtggacaacatgtggccccagcacctaaaggaaaagcag
acggaagccacaaatgcccttgcggagatgaagtaccccaaagtgaagaagtactgtctg
atgagcgtgaagggctgtttcaccgacttccacattgactttggaggcacctctgtgtgg
taccatgttttccgtggtggaaagatcttttggctgatccctccaaccctgcacaacttg
gcattatacgaggagtgggtgctgtcaggcaaacaaagtgacatctttctgggagaccga
gtggagcgatgccaaagaattgagctgaaacaaggctacacatttttcatcccttctggt
tggatccatgcagtgtatacccctgtggactctctggtgttcggcgggaacatcctgcac
agctttaacgtgcccatgcagctgcggatctacgagattgaggacagaacccgggttcag
cccaagttccgttaccccttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtgtgacccagcgctcctacctcactcaggaataccagagagaattaatgcttatt
gatgccccaagaaaagccagtgtagacggcttctcatctgattcttggctggagatggag
gaagagtcctgtgagcagcaatcccaggaggaggaggaggaggagaaggaggaggaaggg
gatggtgcagataaaacacccaggccatccactgatggccccacctcaccctccagcacc
cgctcggaggagcaggagaacacagggaagaagcccaaagcccctgccatgcaattcctc
aagaggactttgtccaacgaatcggaggaaagtgtcaagtccacaacgatgcccatagac
taccccaagacacccacaggctcgccttccactgaggtctctaccaagtggacccacctt
accgaatttgaactgaagggcctgaaagccttggtcgaaaaactagagtctctcccggag
aataagaagtgtgtccctgagggcatcgaggacccccaggccctcctggaaggtgtaaag
aatgtactaaaggaacatgtggatgacgatcctagcctggccatcactggagtccccgtg
gttagttggccaaagaagactccaaagaaccgggtggtgggtcggcctaagggcaagttg
ggcccggcctcagcggtgaagttggctgccaacagaactacagcaggagctcgcaggcgc
cggacgcgatgccgcaagtgcgaggcctgcctgcggaccgagtgtggggagtgccacttt
tgcaaggacatgaagaagtttggaggccctgggcgcatgaagcagagctgcatcatgcgc
cagtgcatcgcgccagtgctgccccacaccgccgtgtgccttgtgtgtggcgaggcaggg
aaggaggacacagtggaagaggaggaaggcaagtttaacctcatgctcatggagtgctcc
atctgcaacgagatcatccaccctggatgccttaagattaaggaatcagagggtgtggtc
aacgatgaacttcctaactgctgggagtgtccgaagtgtaaccatgctggcaagaccggg
aaagcctacaagcaaaagcgtggccctggctttaaatatgcctccaacctgcctggctcc
ttgctcaaggagcagaagatgaaccgggacaacaaggaagggcaggagcctgccaagcgg
aggagtgagtgtgaagaggctccccgacgcaggtcagatgagcaccccaagaaggtgcct
gcagatggcatcctacgccgaaagtctgatgatgtacacctgaggaggaaacggaaatac
gagaagccccaagagctgagtggacgcaagcgagcctcgacgcttcaaacgtccccgggt
tcctcctctcacctctcgccgaggccccctctaggcagcagtctcagcccttggtggaga
tccagtctcacttacttccagcagcagctaaaacctggcaaagaagataagcttttcagg
aaaaagcggcgatcctggaagaacgctgaggatcggttggcactggccaacaaacccctt
cggcgcttcaagcaggaaccagaagacgacctgcctgaggcacctcctaagagccgggag
agtgaccagtcacgttccagctcacccactgctgggcccagcactgaaggggctgaaggc
ccagaagagaaaaagaaggttaagatgcgccggaaacggcggcttccaaacaaggagctg
agcaaagaactaagcaaggagctcaatcacgagatccaaaagacagagagtacgttggcc
cacgagaaccaccagcccatcaagtcagagcccgagagtgagaatgaggagccaaagagg
cccctaagccactgcgagcgcccccaccgcttcagcaaggggctcaacggcacccctcgg
gagctgcggcacccactgggacctggcctgcgcagcccacctcgggttatctcccggccc
ccaccttcttcgtccccacctaagtgcatccagatggagcgtcatgtgatccggccgcca
cccatcagccccccacctgactcgctgccccttgatgatggagcagcccatgtcatgcac
agggaggtgtggatggcggtcttcagctacctcagccaccaagacctgtgtgtctgcatg
cgggtctgcagaacctggaaccgctggtgctgcgataagcggttgtggacccgcattgac
ctgaaccactgcaagtccatcacgcccctgatgctgagcggcatcatccggcgacagcct
gtctcccttgacctcagctggaccaatatctccaagaagcagctgagttggctcatcaac
cggttgcctgggctccgagacttggtgctgtcgggttgctcgtggattgctgtctcagcc
ctctgtagttccagttgtccattgctccggaccctggatgttcagtgggtagaaggacta
aaggatgcccagatgcgggatctcctgtccccacccacagacaacaggccaggtcagatg
gacaatcggagcaagctccggaacattgtagaactgcgcctagctggcctggacatcaca
gacgcctccctgcggctcattatccgccatatgcccctgctctccaaactccaactcagc
tactgtaaccacgtcactgatcagtccatcaacctgctcactgcagtcggcactaccacc
cgagactctctgacagagatcgtcctatcagactgcaataaggtcactgaccagtgcctg
tccttcttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaagtc
accaaggaaggttgtgagcagttcatagctgaaatgtctgtgagtgttcaatttgggcaa
gtggaagagaaactcctgcaaaaactaagttag
DBGET
integrated database retrieval system
