KEGG   Microbacterium aurum: BOH66_08970
Entry
BOH66_08970       CDS       T04977                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
maur  Microbacterium aurum
Pathway
maur03030  DNA replication
maur03410  Base excision repair
maur03420  Nucleotide excision repair
maur03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:maur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BOH66_08970
   03410 Base excision repair
    BOH66_08970
   03420 Nucleotide excision repair
    BOH66_08970
   03430 Mismatch repair
    BOH66_08970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maur03032]
    BOH66_08970
   03400 DNA repair and recombination proteins [BR:maur03400]
    BOH66_08970
Enzymes [BR:maur01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BOH66_08970
DNA replication proteins [BR:maur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BOH66_08970
DNA repair and recombination proteins [BR:maur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BOH66_08970
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BOH66_08970
   MMR (mismatch excision repair)
    DNA ligase
     BOH66_08970
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BOH66_08970
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD BRCT HHH_5 HHH Nlig-Ia PTCB-BRCT
Other DBs
NCBI-ProteinID: APZ34360
UniProt: A0A1P8U8A8
LinkDB
Position
1817976..1820303
AA seq 775 aa
MTDTAEELPATLDEARAASDRLIELIVGAREAYYGRDAEIVDDATYDGWMRALEAIERAY
PEVQGQDSPTLSVGAAQASMFAPVEHAERMLSLDNVFSADELRDWCVKTQGAAGRAVRWL
LELKIDGLAINLRYENGVLVSAATRGDGRVGEDVTVNAVQVAGIPSRLSGTGHPPLVEVR
GEVYIPVAAFDELNALQARLRERVIADGLARGGDEEKLTRSAARRFPAFANPRNAASGGL
RQQLEKKSGMELEAGRARLDSLRLFVHGIGAWPAPPVQSQSEVYALLAEWGLPTSPYFRT
ADDIDGVLDFVTHYGEHRHDVEHEIDGVVVKVDELALHDELGATSRAPRWAIAYKYPPEQ
VNTKLLDIVVSVGRTGRATPFAVMAPARVAGSVVRQATLHNQEVVVAKGVLIGDTVVLRK
AGDVIPEVLGPVVELRDGSERAFVMPTQCPECGATLAPAKEGDIDLRCPNTRTCPAQVRG
RVEHIGSRGALDIEALGEVTAAALTQPTVRAEPPLRTEAGLFDLTLDELVPIEVVVRDAE
TGEPKLDEQSGEPVTRAPFRRQPSPAEKKEGLTGPQPSAQALTLIEELEKAKTKDLWRFL
VALSIRHVGPVAARALAQWFGSMAAIRAASREELAAVEGVGGIIADSLLEWFEVDWHREI
VERWEAAGARLEIPGHPGPGAAAAAGGVLEGVTVVATGSLEGYTREGAQEAIIAAGGKAA
SSVSKKTDFVAAGPGAGSKLGKAEELGIRIIDAAQFRLLVEQGPAALDALDPDAG
NT seq 2328 nt   +upstreamnt  +downstreamnt
gtgaccgatactgcagaggagcttcccgcgacgctcgacgaggcccgcgccgcgtccgac
cggctcatcgagctgatcgtcggagcgcgcgaggcgtactacggccgcgacgccgagatc
gtcgacgacgcgacgtacgacgggtggatgcgcgccctcgaggcgatcgagcgcgcctac
ccggaggtgcagggtcaggactcgccgacgctgtcggtgggagccgcgcaggcctcgatg
ttcgctcccgtcgagcacgcggagcggatgctgagcctcgacaacgtcttcagtgccgac
gagctgcgcgactggtgcgtcaagacgcagggggccgcgggacgggctgtgcgctggctg
ctcgaactgaagatcgacggccttgcgatcaacctccgctacgagaacggcgtgctcgtc
tcggcggcgacacgcggcgacgggcgcgtcggagaggacgtgacggtcaatgccgtgcag
gtcgccggcatcccctcgcggttgtccggcaccggccatccgccgctcgtggaggtgcgc
ggtgaggtctatattcccgtcgcggcattcgatgaattgaacgcgctgcaggcgcgactg
cgcgagcgcgtcatcgcggacggcctggcgcggggcggcgacgaggagaagctcacgcgt
agtgctgcgcgccgctttccggccttcgccaatccgcgcaacgccgccagcggcgggctg
cgccagcagctggagaagaagagcgggatggagttggaggccggacgcgcgcggctggac
tcgctgcgcctgttcgtgcacggcatcggcgcctggcccgcgccgcccgtgcagtcgcag
agcgaggtgtacgcactgctggcggagtggggactcccgacgagcccgtatttccgcacg
gcggacgacatcgacggcgtgctcgacttcgtcacgcactacggcgagcaccggcacgac
gtcgaacacgagatcgacggtgtcgtcgtcaaggtcgacgagctcgccctgcacgacgaa
ctcggggcgacgagccgcgcaccgcgctgggcgatcgcctacaagtacccgcccgagcag
gtcaacaccaagctgctcgacatcgtggtgtcggtcgggcggaccggccgcgcgacgccg
ttcgcggtgatggcgcccgcgcgggtcgcgggctcggtggtgcggcaggcgaccctccac
aatcaggaggtcgtcgtcgccaagggcgtgctcatcggcgacaccgtcgtgctgcggaag
gccggcgacgtcatccccgaggtgctcggcccggtggtcgagctgcgcgacggcagcgag
cgcgcgttcgtcatgccgacgcagtgccccgagtgcggagccaccctcgcgcccgcgaaa
gagggcgacatcgacctgcgctgccccaacacgcggacgtgccccgcccaggtgcgcgga
cgtgtcgagcacatcggctcgcgcggggcgctcgacatcgaggcgctcggcgaggtcacc
gccgccgcgctcacccagccgaccgtgcgggcggagccgccgctgcgcaccgaggcgggg
ctgttcgacctcacgctcgacgaactcgtcccgatcgaggtcgtcgtgcgcgacgccgag
acgggcgagcccaagctcgacgagcagagcggcgagccggtgacccgcgcgccgttccgc
cgtcagccgtccccggccgagaagaaggagggcctcaccggcccgcagccctccgcgcag
gcgctgacgctcatcgaagaactcgagaaggcgaagacgaaggacctctggcgcttcctc
gtggccctcagcatccgtcacgtcggccccgtcgcggcgcgcgcgctggcccagtggttc
gggtcgatggccgcgatccgcgccgcgagccgcgaggagctggcggcggtggaaggcgtc
ggcgggatcatcgccgactcgctcctggaatggttcgaggtcgactggcatcgcgagatc
gtcgagcgctgggaggccgcgggcgcgcggctggagatccccggacaccccggtcccggc
gcggctgccgccgcgggcggcgtgctggagggcgtcaccgtcgtcgcgaccggctcgctc
gagggctacacccgggagggggcgcaggaggcgatcatcgccgccggcggcaaggccgcc
tccagcgtctcgaagaagaccgacttcgtcgcagcgggcccgggtgcgggttcgaagctc
ggtaaggccgaagagctcggcatccgcatcatcgacgccgcgcagttccgcctcctcgtc
gagcagggtcccgccgcgctcgatgcgctcgaccccgacgcggggtga

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