Melittangium boletus: MEBOL_001293
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Entry
MEBOL_001293 CDS
T05066
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbd
Melittangium boletus
Pathway
mbd03030
DNA replication
mbd03410
Base excision repair
mbd03420
Nucleotide excision repair
mbd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MEBOL_001293
03410 Base excision repair
MEBOL_001293
03420 Nucleotide excision repair
MEBOL_001293
03430 Mismatch repair
MEBOL_001293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbd03032
]
MEBOL_001293
03400 DNA repair and recombination proteins [BR:
mbd03400
]
MEBOL_001293
Enzymes [BR:
mbd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MEBOL_001293
DNA replication proteins [BR:
mbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MEBOL_001293
DNA repair and recombination proteins [BR:
mbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MEBOL_001293
NER (nucleotide excision repair)
GGR (global genome repair) factors
MEBOL_001293
MMR (mismatch excision repair)
DNA ligase
MEBOL_001293
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MEBOL_001293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
BRCT_2
YiiM_3-alpha
RNA_pol_A_CTD
PhiKZ_gp244
GemA
Motif
Other DBs
NCBI-ProteinID:
ATB27848
UniProt:
A0A250I9G7
LinkDB
All DBs
Position
1537621..1539648
Genome browser
AA seq
675 aa
AA seq
DB search
MTAPKTDDATRIAQLRKELAHHNHRYYVLDSPEVSDAEYDRLMRELQELEARHPELVTED
SPTRRVGGTPAEKFEKVRHLVPMLSLANVFDDEELSDFDERIRRQTGLAKVGYVCEPKLD
GLAITLRYEQGRFVRGATRGDGTEGEDVTANLRTIRSLPTELLVQDGVTAPGAIDVRGEV
FISKKDFKRLNDKREEEGEPLFANPRNAAAGSLRQLDPRITASRPLSLYLYECVPGEGVP
TFRSHTEKLGYLRSLGLPVNRAVTVEDVDGVRAQYRASVEGRHALPFEVDGMVVKVDEED
LRQRLGQVSKSPRWAVAYKFPPEEESTIVESIQVYVGRTGALTPVAHLKPVKVGGVTVSR
ATLHNEDELRRKDVRQGDTVFIRRAGDVIPEIVKVVETKRPEGTQPFVFPTECPVCHAAA
TRDDEGAIIRCTGATCPAQLVEKVRHFASRTALDIEGLGEKLAAQLVETGLVKTFADLFH
LTRERLLTLERMGEKSADNLLASIEHAKQTTQPRFLYALGIRHVGESTARVLAEAYPDVR
DLYEASMEDITRVKDVGPTMAAVIHTFFHEPLNRDAIEALLSAGVKPAATRVVKTGLFAG
QTVVLTGGMSGMSREQAKEEIERRGGKVSGSVSRKTDLVVAGEDAGSKLKKAQELGVRIL
DEQGFLQLLQTDVRG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccccgaaaaccgacgacgccacccgcatcgcgcagctccgcaaggagctcgcc
caccacaaccaccgctactacgtgctcgattctccggaggtgagcgacgcggaatacgac
cggctcatgagggagctgcaggagctggaggcgcgccatccggagctcgtcaccgaggac
tcgcccacccggcgggtgggcggcaccccggcggagaagttcgagaaggtgcgccacctc
gtccccatgctgtcgctggccaacgtcttcgacgacgaggagctgagcgacttcgacgag
cgcatccgccgccagacgggcctggcgaaggtgggctacgtgtgcgagcccaagctggac
ggactggccatcaccctgcgctacgagcaggggcgcttcgtccggggcgccacgcgagga
gacggcacggagggcgaggacgtgacggccaacctgcgcaccatccgcagcctgcccacc
gagctcctggtccaggacggcgtgacggctcccggcgccatcgacgtgcgcggcgaggtc
ttcatctccaagaaggacttcaagcggctcaacgacaagcgggaagaagaaggcgagccg
ctcttcgccaatccgcgcaacgccgccgccggcagcctgcgccagttggatccacgcatc
accgcctcgcggcccctgtcgctctacctgtacgagtgcgtgcccggcgagggcgtgccc
accttccgctcgcacacggagaagctcggctacctgcgctcgctcggcctgccggtgaac
cgggcggtgacggtggaggacgtggacggggtgcgcgcccagtaccgcgcctccgtcgag
ggccgccatgccctgcccttcgaggtggacggcatggtggtgaaggtggacgaggaggac
ctgcgccagcggctgggacaggtctccaagagcccgcgctgggccgtggcctacaaattc
ccgcccgaggaggaatcgacgatcgtcgagtccatccaggtgtacgtgggccgcacgggc
gcgctcacgccggtggcgcacttgaagccggtgaaggtgggcggcgtcacggtgagccgc
gccacgctgcacaacgaggacgagctgcgccgcaaggacgtgcgccagggggacaccgtc
ttcatccgccgcgcgggtgacgtgattcccgagatcgtcaaggtggtggagacgaagcgc
cccgagggcacccagcccttcgtgttccccaccgagtgtccggtctgccacgcggcggcc
acgcgggacgacgagggcgccatcatccgctgcacgggcgccacctgccccgcccagctc
gtggagaaggtccgccacttcgcctcgcgcaccgccctggacatcgagggcctgggggag
aagctcgccgcgcagctcgtggagacgggcctcgtgaagaccttcgcggacctcttccac
ctcacgcgcgagcggctgctcacgctcgagcgcatgggcgagaagagcgcggacaacctg
ctggcgagcatcgagcacgccaagcagacgacccagccgcgcttcctctacgcgctgggc
atccgccacgtgggcgagtccaccgcgcgggtgctcgccgaggcctaccccgacgtgcgc
gacctctacgaggcctcgatggaggacatcacccgcgtcaaggacgtgggcccgacgatg
gccgcggtcatccataccttcttccatgagccgctcaaccgcgacgccatcgaggcgctg
ctctccgccggggtgaagcccgccgcgacccgcgtcgtcaagacgggcctgttcgccggc
cagacggtggtactcaccggcgggatgagcgggatgagccgggagcaggccaaggaggaa
atcgagcgccggggaggtaaggtctctggaagtgtctcgcgcaagactgacctcgtggtg
gcgggcgaggacgccggcagcaagctgaagaaggcccaggaactcggggtaagaatcctg
gacgagcagggcttcctgcagctgctccagacggacgtgagaggatag
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