Drepanopeziza brunnea: MBM_01068
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Entry
MBM_01068 CDS
T03105
Name
(RefSeq) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MBM_01068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_01068
Enzymes [BR:
mbe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MBM_01068
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
MBM_01068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
18757003
NCBI-ProteinID:
XP_007288957
UniProt:
K1X5G3
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MPLSVHSGDETDDDGDHELMYGHGPLTEEELNEKYPGRPKNKRKTPPFHQLVNSLFIPLT
ENKAKVGGPASNSRKKGHGSNTMTPHERRKNIIEQFVSRWRSEVGKDFYPAIRLILPSRD
RDRPMYGLKEKSIGKLVVKMVGLNSRSEDAMNLTDWKRINSASKNAGDFAGRCYEVLSKR
SMRTQVGNMRIAEVNALLDQLAAVSKEADQLPLFEKFYSRMNAEELMWLIRIILRQMKIG
ATEKTVLDVWHPDGDALFNVSSSLRRVCWELVDPNIDLGTEDKGIQIMSCFQPQLAQFQS
HSFPVMLAKMQLEEDAEGTNTFWIEEKLDGERMQMHMDTGPDGKRRFAWYSRKATDYTYL
YGSSHDDDNSALARFIDGAFKKKVRNIILDGEMITWNMDADKVVAFGTLKTAAKSERNNP
YQADTGNRPLFRVFDCLYLNHKPITMYTLRERYRALESSIQNVNRRLEIHTHATASELGG
QEAIEEQLRDVIDKGHEGLVLKNPNSAYSLNERNNMWMKVKPEYMTEFGESLDLIVIGGY
YGGGHRGGKLASFLCGLRVNQDQIARGSNPMKCFSFCKVGGGFRGEDYAKIYHQTDGKWI
PWNDMRPPKEYIRLGGGEKQYEKPDVWIKPCDSIVLEVKAASVGVSDRFGTKYTLRFPRF
RRLKDEKSWEQALSMDEFDEVKQNAEEESKTKEIKVENRRKTKRLKKEYRIAGNDSKIKT
PYAGPKTKIFEGLNFCVMNESQQAPKRTKAETEQAIKGNGGNIFQTPGAAPNMICIGDKR
VVKVASLIKMGQKNVVKPAWVFDAMQQAEADGLGKGRYLLPFEPAHMFHIAGGFSDEIAG
SVDVYGDSYARDTNPEDLKALVDDMIHPKNSSFSVEEFLLQLDEHGKGLQDTPGSMFARC
VVRFVSSDMGGAKTMANIDHLIIQNQFRFAAGRISDNDDDESITHYVLLDQDEDLISSLR
KRVVQLTRRPRIVDINWLKDSWEEKTLLDEERYAL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgccgctctcagtccacagcggcgatgagaccgacgatgacggagatcacgagcttatg
tatggccacggccctttgaccgaggaagaactgaacgaaaagtaccctggtcggcccaag
aacaaaaggaaaacaccgcctttccaccagcttgtgaacagtctcttcatacccttgacg
gagaataaggccaaggtcggtgggcctgcgagtaatagtcgaaagaaaggtcatggatcc
aacacgatgacccctcacgagagacgcaaaaatattatcgagcaatttgtatccagatgg
cgcagtgaagttgggaaagacttctaccctgcgattcgcctcatccttccgtcgagagat
cgcgacaggcctatgtatggcctgaaggagaagagtattggtaagctggtcgtgaagatg
gtgggattgaattctcgttctgaggatgccatgaacttgacggactggaagaggattaac
tcggcgagtaagaatgcgggtgactttgcaggaaggtgttatgaggtgttgtctaagcga
tccatgcgaacgcaagtgggcaatatgcgaattgccgaagtcaacgcactgctggatcag
ctcgctgctgtgtcaaaggaagcagaccagttgccactctttgagaagttctacagtcgg
atgaatgcggaggagcttatgtggttgattcgcattatcctgcgtcagatgaagattgga
gcaaccgagaaaaccgttcttgatgtttggcatcccgatggtgatgctcttttcaatgtt
tcatcaagtttgcgacgtgtgtgttgggaattagtcgatcctaacattgaccttggcact
gaagataaaggaatccaaatcatgagctgcttccagccccaactcgcccaatttcagtca
cactcgttccccgtcatgcttgccaagatgcagctcgaagaagacgctgaaggtaccaac
acgttctggatcgaggagaaactcgatggagaacggatgcagatgcatatggatacaggc
ccggatggcaagcgaagatttgcgtggtactcccggaaagccacagactacacatattta
tatgggagttcccacgatgatgacaactcggcactggcccgatttatcgatggtgctttc
aaaaaaaaagtgaggaacattattctcgacggagagatgataacgtggaacatggatgcg
gacaaagttgtggcctttggtactttgaagacggctgcgaaatcagaacgaaacaaccct
tatcaggctgacacaggcaaccgacctttatttcgcgtttttgactgcttatacttgaac
cacaagccgatcaccatgtacactctgagagaacgatacagagctctcgagagctctatc
cagaatgtcaatcgcagacttgagattcatacacacgcgacggcctccgagttaggtggg
caagaagccattgaagaacaattacgcgacgtgattgataaaggtcatgagggtctggtt
ctgaagaaccccaattctgcatactcactgaatgagagaaacaatatgtggatgaaggtc
aaacctgagtacatgactgagtttggcgaatcccttgatctcatcgtcattggcggatac
tatggaggaggtcatcgaggtggcaagttagcatcattcctgtgtggactgcgtgtgaac
caagaccagatcgctcgtggatcaaatcctatgaagtgtttctctttttgtaaggttgga
ggaggttttcgcggggaagactacgctaaaatttatcatcaaaccgatgggaaatggatt
ccttggaatgatatgcgtccacctaaggagtacatcaggctcggtggcggcgagaaacag
tatgagaagccagacgtttggatcaagccctgcgattccattgtccttgaagtcaaagca
gcgtcagtgggtgtatctgataggtttgggacgaaatacacgctgagattcccgcgcttc
agaagactcaaggatgaaaagagctgggaacaggcgctctcgatggacgaattcgacgaa
gtgaagcagaacgccgaagaggaatctaaaacaaaggaaataaaggtagaaaaccggagg
aaaactaagaggttgaagaaggagtaccgtatcgctggcaatgacagcaaaattaagaca
ccgtacgcaggcccgaaaaccaagattttcgaagggctaaacttttgcgtcatgaacgaa
tcacagcaagccccaaagaggactaaggcggagaccgagcaagctatcaaaggtaacggt
gggaatatctttcaaaccccaggagcggcaccgaatatgatttgcattggagacaaacgg
gttgtcaaggttgcgagtctgataaagatgggacagaagaatgttgtgaagccggcatgg
gtgtttgatgccatgcagcaagcagaagctgacgggcttggaaaggggcgctacctactt
ccgttcgagcctgcccatatgttccacattgccggcggctttagtgacgagattgcgggc
agcgttgatgtgtacggcgacagctatgcccgggatactaatcctgaagacctgaaagcc
ctggtagatgatatgatacaccccaaaaactcttctttctcggtagaagagtttttgcta
cagttggatgaacatgggaaagggctccaagatacgcccggctcgatgttcgcgagatgt
gttgttcgttttgtctcttccgatatgggcggggcgaagacgatggcgaatatcgaccat
ctgatcatccagaaccagtttcgattcgccgctgggaggatttcagataacgacgacgat
gaatcgattacgcattacgtgctactggaccaggacgaagatctgattagctctttgcgg
aagagagttgtgcaactgacgaggcgcccgcggattgtggacatcaactggctcaaggat
agctgggaagaaaagacattgttggatgaggaaagatatgctttgtga
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