Moschus berezovskii (Chinese forest musk deer): 129542713
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Entry
129542713 CDS
T09065
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129542713 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbez03000
]
129542713 (KDM2B)
04121 Ubiquitin system [BR:
mbez04121
]
129542713 (KDM2B)
03036 Chromosome and associated proteins [BR:
mbez03036
]
129542713 (KDM2B)
Enzymes [BR:
mbez01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129542713 (KDM2B)
Transcription factors [BR:
mbez03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129542713 (KDM2B)
Ubiquitin system [BR:
mbez04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129542713 (KDM2B)
Chromosome and associated proteins [BR:
mbez03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129542713 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129542713 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
Motif
Other DBs
NCBI-GeneID:
129542713
NCBI-ProteinID:
XP_055261352
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MEAEKDSGRRLRPIDRQRYDENEDLSDVEEIVSARGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLVFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCMTQRSYLTQEYQRESMLI
DAPRKPSIDGFSSDSWLEMEEESCEQQPQEEKEEEEEEEEEEEGADKTPKASTDGPASPT
STPFEDQEAPGKKPKAPAMRFLKRTLSNESEDSVKSATMPTDYPKTPTGSPATEVSAKWT
HLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHAEDDPSLAITGV
PVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGEC
HFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLME
CSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYASNLP
GSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGILRRKSDDVHLRRKR
KYEKPQELSGRKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKL
FRKKRRSWKNAEDRITLANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGPSTEGT
EGPEEKKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLAQENHQPIKSEPESENEEP
KRPLGLCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIR
PPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCKTWNRWCCDKRLWTR
IDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAV
SALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLD
ITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQ
CLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgcccgattgaccgccaaagatacgac
gagaacgaggacttgtcggacgtggaggagatcgtcagcgcccgcggcttcagcctggag
gaaaagctgcgcagccagctgtaccagggggatttcgtgcacgccatggagggcaaagat
ttcaactatgagtatgtgcagagagaagctctcagagttcccctggtatttcgagaaaag
gatggcctgggaattaagatgcctgaccctgatttcacagtccgagacgtcaaactccta
gtgggtagccggcggctggtggacgtgatggacgtgaacacccagaaaggcacggagatg
agcatgtcccagttcgttcggtactacgagacgcccgaggcccagcgggataagctgtac
aacgtcatcagccttgagttcagccacaccaagctggagcacttggtcaagcgtcccacc
gtggtagacctggtggactgggtggacaacatgtggcctcagcacttgaaggagaagcag
acggaagccacgaacgccattgcagagatgaagtaccctaaagtgaagaagtactgtctg
atgagtgtgaagggttgtttcactgacttccacatcgactttggaggcacttccgtttgg
taccatgttttccggggtgggaagatcttttggctgattcctccaaccttgcacaatttg
gcactgtatgaggagtgggtgctgtcaggcaaacagagcgacatcttcctgggagaccgc
gtggagcgatgccaaagaattgagctgaaacagggctacacgtttttcatcccttcaggc
tggatccatgcagtctacactcctgtagactctctggtgtttggcgggaacatcctgcac
agcttcaacgtgcccatgcagctgcggatctacgagatcgaggacagaacgcgggtgcag
cctaaattccgttaccccttctactatgagatgtgctggtatgtcttggagagatacgtg
tactgtatgacccagcggtcctacctcactcaggaataccagagagaatcaatgcttatt
gatgccccaagaaagcccagcatagacggcttctcatctgattcctggctggagatggag
gaggagtcctgtgagcagcagccccaggaggagaaggaggaagaggaggaagaggaggaa
gaggaggagggtgcagataagacccccaaagcatccaccgatggccccgcctcacccacg
agcaccccgtttgaggaccaggaggcccccgggaagaagcccaaagcccccgccatgcgg
ttcctcaaaaggactctgtcaaacgagtcagaggacagtgtgaagtccgccacgatgccc
accgactaccccaagacgcccaccggttctcccgccactgaggtctctgccaaatggacc
cacctcaccgagtttgaactgaagggcctgaaagctctggtggagaaacttgaatccctc
ccggaaaacaagaagtgtgtccccgagggcatcgaggacccccaggccctcctggagggt
gtgaagaatgtcctgaaggagcatgcagaggacgaccccagtctggccatcactggggtc
cccgtagtcacttggccaaagaagactccaaagaaccgggcggtaggtcggcccaagggg
aagctgggaccggcctccgcggtgaagttggccgccaaccggaccacggcgggagctcgc
cggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggacggagtgcggcgagtgc
cacttctgcaaggacatgaagaagttcgggggccccgggcggatgaagcagagctgcatc
atgaggcagtgcatcgcgccagtgctgcctcacaccgccgtatgcctggtgtgtggcgag
gcgggaaaagaggacacagtggaagaggaagaaggcaagtttaacctcatgctcatggag
tgctccatctgcaatgaaatcatccaccctggatgccttaagattaaggagtcagagggc
gtggtcaacgatgagcttccaaactgctgggagtgtcccaagtgtaaccacgccggcaag
accgggaaagcctacaagcaaaagcgtggccctggctttaagtacgcctccaacctgcct
ggctccctgcttaaggagcagaagatgaaccgggacaacaaggaagggcaggagcctgcc
aagcggaggagcgagtgtgaggaggcaccccggcgcaggtctgacgagcaccccaagaag
gtgccccccgacggcatcctgcgccgaaagtcggacgatgtgcacctgaggaggaagcgg
aaatacgagaagccgcaggagctgagtggacgcaagcgagcctcgacgcttcaaacatcc
cccggttcctcctctcacctctcgccgaggccccctctaggcagcagcctcagcccctgg
tggagatccagtctcacttacttccagcagcagctaaaacccggcaaagaagataagctt
ttcaggaaaaagcggcggtcctggaagaacgccgaggaccggataactctggccaacaag
cctctccggcggttcaagcaggaaccagaggacgacctgcccgaggcgccccccaagacc
agggagagcgaccactcgcgctccagctcccctaccgccgggccaagcacggagggcaca
gaggggcccgaggagaagaagaaggtgaagatgcgccggaagcggcggctccccaacaag
gagctgagcaaggagctgagcaaggagctgaaccaggagatccagaagacggagagcagc
ctggcccaggagaatcaccagcccatcaagtcggagcctgagagcgagaacgaggagccc
aagcggcccctgggcctctgcgagcgcccccaccgcttcagcaaggggctcaacggcacc
ccccgggagctgcggcaccagctggggcccggcctgcgcagcccgccccgagtcatatcc
cggccccctccctccgtgtcccctcccaagtgcatccagatggagcgacatgtgatccgg
ccgccccccatcagccccccacctgactcgctgcccctggatgacggggcagcccacgtc
atgcacagggaggtgtggatggccgtcttcagctacctcagccaccaagacctgtgtgtc
tgcatgcgggtctgcaagacctggaaccgctggtgctgcgataagcggttatggacccgc
atcgatttgaaccactgcaagtccatcacgcccctgatgctaagtggcatcatccggcga
cagcctgtctcccttgacctcagctggaccaatatctccaagaaacagctgagctggctc
atcaaccggttgcctgggctccgagacttggtgctgtccggctgctcatggatcgcagtc
tctgcactctgtagctccagctgtccgctgctccggaccctggatgtccagtgggtagaa
ggattgaaggacgcccagatgcgggacctcctatccccgcctacagataacaggccaggt
cagatggacaatcggagtaaactccggaacatcgtggagctgcgtctggccggcctggac
atcacggacgcctccctgcggcttatcatccgccacatgcccctgctctccaagctccac
ctcagttactgtaaccacgtcactgaccagtccatcaatctgctcactgccgtgggcacc
accacccgggactccttaaccgaaatcaacttgtcagactgcaataaggtgactgaccag
tgcctgtccttcttcaaacgctgtggcaatatctgtcacattgacctgaggtactgcaag
caagttaccaaggaaggctgcgagcagttcatagccgaaatgtctgttagtgtccagttc
gggcaagtggaagaaaaactcctgcaaaaactgagttag
DBGET
integrated database retrieval system
