Moschus berezovskii (Chinese forest musk deer): 129549756
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Entry
129549756 CDS
T09065
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mbez03036
]
129549756 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
mbez03400
]
129549756 (SMCHD1)
Chromosome and associated proteins [BR:
mbez03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129549756 (SMCHD1)
DNA repair and recombination proteins [BR:
mbez03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
129549756 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_5th
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_6th
Ig_SMCHD1_7th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
SMC_hinge
HATPase_c_3
HATPase_c
IFT20
Motif
Other DBs
NCBI-GeneID:
129549756
NCBI-ProteinID:
XP_055273114
LinkDB
All DBs
Position
Unknown
AA seq
1998 aa
AA seq
DB search
MAAAGGGGGPSVETGEGGGGDGLRTVYLFDRREKESELGDRALQVEERSDFAAFRASVCQ
TLGISPGEKFVITTTSRKEITCDNFDEIVKDGVTLYLLQSVNQLLLTATKERIDFLPHYD
TLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGVRRIQIKLHFDETQGKPAVAV
IDNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGKQA
VFFVGQSARMISKPADSQDVHELLLSKEDFEKKEKNKEAIYSGFIRNRKPSDSSHITNDD
ERFLHHLITEEKEKDSFTAVVITGVQPEHMQYLKNYFHLWTRQLAHIYHYYIHGPKGNER
HTSKEAGPFNNIDIEISMFEKGKTPKIINLREIQDDMQTLYINTAADSFEFKAHVEGDGV
VEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCFILEKAARGKRPIFECFWNGRLIP
YTSVEDFDWCTPPKKRGLAPFECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLF
TRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGVITRPDLPSKKQGPWATYSAI
EWDGKIYKAGQLVKTIKTLPLFYGSIVKFFLYGDHDGEVYATGGEVQIAMEPQALYDEIK
TVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRIEI
LNKKGETMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKMENI
HKLGNYTLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFN
IPVEFQDEFGHTSQLSTDIQPVFEASGLTLHYEEITKGPNCVIRGVTAKGPVNSCQGKNF
NLKVILPGLKEDSQILKIRLLPGPPCRLKVKPDSEILVIENGTAFPFQVEVLDESDNITA
QPKLIVHCKFSGAPNLPIYVVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSCKDVA
PVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREIH
ITSALAEKIKVNWTPEINKEHVLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVR
PLPDEPKHLKCELKGGKTVQMGQELQGEIVVTVTDQYGNQIQAFSPSSLSALGIAGIGLD
SSHLKTAFQENTQSINVRGVRFIPGPPGNKDLCFTWREFSDFIRVQLVSGPPAKLLLVDW
PELKESIPVINGRELQNPLIVQLCDQWDNPAPVPQVKISLVKANNLKLTPSNQQHKTDER
GRANLGVFSVFAPRGEHIMQVKATYNKNTIEGPIIKLMILPDPEKPIRLNVKYDKDASFL
AGGIFTDFMITVISEDDSIIKNINPARISMKMWKLANSGNRPPANAEIFSCNKIKDNDKE
DGCFYFRDKAIPNKVGTYCIQFGFTMDKANILNSEQIIVDVLPNQPVKLVPEIQPATPAV
SNVRSVASRTLVKDLYLHITDDYNNHTGVDLVGTVIATIKGSNEEDDIPLFNGKIRTLEF
PFVKGSAEITSLVLAENSPGRDSTEYFIVFEPRLPALSRTLESYILPFMFYNDVKKQQQM
AALTKEKDQLSKSITVYRTLFDTSKQLLDEMKCQVEEAKLKEAQLRNELKNHNIDISTTQ
QIPHIEALLKRKLSEQEELRKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVISW
HLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHYRNGKLYFKP
IGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTRD
GDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLILGEQIDLLQQYRTAVCRLGSVN
EDLNGQLKYLHTPDMKRKKQELDEHEKNLKLIEQKLGMTPTHKCNDSLPHPMTDSPVPPK
RLRREAARQNRIITKTDV
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggcggcggcggcgggccctcggtggagaccggagagggtggcgggggc
gacggcctcaggacggtgtacttgtttgaccggcgcgagaaggagtcggagctcggggac
cgggcgctgcaggtcgaggagcgctcggacttcgcggcgttccgcgcctccgtttgtcag
acacttggcatttcacctggagagaaatttgtcattacaacaacaagtaggaaagaaatt
acctgtgataactttgatgaaattgttaaagatggagtcactctatacctgctacagtca
gtcaatcagttactactaacagctacaaaagaacgaattgacttcctacctcactatgac
acattggttaaaagtggcatgtatgaatattatgcaagtgaaggacaaaatcctttacca
tttgctcttgcagaattaattgacaattcattgtctgctacttctcgtaacactggtgtt
agaagaatacagatcaaattgcattttgatgaaacacaaggaaaacctgctgttgcagtg
atagataatggaagaggaatgacctctaaacagcttaacaactgggccgtgtataggttg
tcaaaatttacaaggcaaggtgactttgaaagtgatcattcaggatatgttcgaccactg
ccagtacctcgcagtttaaatagtgatatttcctattttggtgttgggggcaagcaggct
gttttctttgttggacagtcagccagaatgataagtaagcctgcagactcccaggatgtt
catgaacttttactttctaaagaagattttgagaagaaggagaaaaataaagaagcaata
tatagcggatttattagaaacagaaagccgtctgattctagtcacattacaaatgatgat
gaaagatttctgcatcatcttatcacagaggagaaggaaaaagatagctttactgctgtg
gttatcacaggggtacaaccagaacacatgcagtacttgaaaaattatttccatctttgg
accagacagttagcgcatatttatcattattacatccatggtccaaaagggaatgaaaga
catacatcaaaggaagctggacctttcaacaacattgatattgaaatttctatgtttgaa
aaggggaagacacctaagattatcaacctgagggaaatacaagatgacatgcagacattg
tatataaatacagcagccgatagttttgagttcaaggctcatgttgaaggagatggtgta
gtggaagggattatccgatatcaccctttcttatatgatagagaaacctaccctgatgat
ccatgctttccatcaaaattaaaagatgaagatgatgatgacgattgtttcatacttgag
aaagcagcaagagggaaaaggcctatttttgaatgtttttggaatggacggctaatacca
tatacatctgttgaagactttgactggtgtactcctcctaagaagagagggcttgcacct
tttgagtgctacaataggatatctggtgcattatttactaatgacaaattccaggtcagc
acaaataaactgacctttatggatcttgagctaaaactgaaagacaagaacacccttttt
acaaggattttaaatggacaggagcagcgaatgaaaattgacagagagtttgctttatgg
ctgaaggactgccatgaaaagtatgacaaacaaataaaattcaccctttttaaaggagta
attacacgtcctgatcttccttctaaaaagcagggcccctgggccacttattcagcaata
gaatgggatggaaaaatatacaaagcaggacagctggtcaagacaatcaagacacttcct
ctcttttatggaagcattgtgaaattttttctctatggtgatcatgatggagaagtatat
gctacaggaggagaggttcaaattgcaatggaacctcaggcactatatgatgaaataaaa
actgtgccaattgcgaagctggataggacagttgctgagaaagctgtgaaaaaatatgta
gaagatgaaatggcaagactccctgatagactgtcagtgacttggcctgaaggagatgaa
ttattgccaaatgagatcagacctgctggaacccccattggtgcgttaagaattgaaata
ttaaataaaaaaggggaaacgatgcagaagcttccaggaacaagtcatggagggtcaaag
aaactcctggttgagctcaaagttatattacactcttcaagtggaaataaagaaatcatt
tcacatattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaaaatatt
cacaagttggggaattatacattgaaattgcaagttgtcctgaatgaaagtaatgcagac
acttatgcaggaaggccactaccatctaaagcaattaaattttctgttaaagagggtaaa
ccagagaaattttcgttcggtcttttggatcctccttttcgtgttggagtcccattcaat
atccctgtggagtttcaggatgaatttggtcatactagtcaactgtcaactgatattcag
ccagtttttgaagcaagtggtttaactttacattatgaagaaataaccaaaggaccaaat
tgtgtcattcgaggtgttacagctaagggccctgtaaactcttgtcaaggcaagaatttt
aatctgaaggttattctgccgggtttaaaagaagactcacagattttaaaaattagatta
cttccaggtcctccttgtcgattgaaagtgaaacctgattctgaaattttagttatagaa
aatggaacagctttcccatttcaggtggaagttttggatgaatcagacaatataacagca
cagccaaagttgattgttcattgtaagttttcaggtgctccaaaccttccaatctatgtt
gtggattgcagtagttctggaactagtattttatcaggaccagcaattcaagttcagaat
attaaaaaagaccagacacttaaagcaaaaattgaaatacctagttgtaaagatgtagca
ccagtggagaagactattaagttgctccccagtagccacgttgccagattacagatattc
agtgtggaaggacagaaggccatccagatcaaacatcaggatgaggttaactggatagca
ggagatgttatgcataatcttatttttcaaatgtatgatgaaggagaaagagaaatccat
ataacatcagctttggcagagaaaattaaagttaattggactcctgagattaacaaagag
catgtactgcagggtctgcttcctgatgtgcaagtaccgacatctgtgaaagacatgcgc
tactgccaggtctcattccaagacgatcatgtgtctttggaaagtgcatttacagtaaga
ccacttccagatgaacctaaacatctaaaatgtgaattaaaaggaggaaaaacggtacag
atgggtcaagagcttcaaggagaaatagttgtcactgttacagatcagtatgggaatcag
attcaagcattttcaccaagttctctgtctgcgttgggaattgctgggattggacttgat
agctcacatttgaaaactgcttttcaggaaaatacacagagtataaatgtgagaggcgtc
agatttattccaggtccccctggaaataaagatctttgctttacttggcgtgaattttcc
gactttattcgagtgcagctagtttctgggccaccagctaaacttctccttgtagactgg
ccagagttaaaggagtccattccagtgattaatggaagagaattgcagaatcctctcatt
gttcaactttgtgatcagtgggataatccagcacctgtgccacaggttaaaataagtctt
gtaaaagctaacaatttaaagctcactccttcaaaccaacagcataaaaccgatgaaagg
ggcagggctaatttgggagtgttcagtgtttttgcccctagaggagaacatattatgcag
gttaaagccacttataacaagaataccatagaaggacccataattaaattaatgattctt
ccagaccctgaaaaacccattcgtctcaatgttaaatatgacaaggatgcttccttttta
gcaggaggtattttcactgattttatgattactgttatttctgaagatgacagtatcatt
aaaaatattaatccagcacgtatttccatgaaaatgtggaaactggcaaacagtgggaac
cgaccaccagcaaatgcagaaatatttagttgtaataaaataaaggataatgacaaagaa
gatggttgcttctacttcagggataaagcaattcctaacaaggtggggacatactgtatc
cagtttggttttacgatggataaagcaaatattcttaacagcgagcagattatagtggat
gttctacctaatcaacctgtgaagttagttcctgaaattcagccagctacaccagctgtt
tcaaatgttcgctcagttgccagtaggaccctggtcaaagatttgtatcttcatatcacg
gatgactacaacaatcatactggagttgatttggttggcactgtaatagctaccatcaaa
ggttctaatgaggaagatgacatacctctctttaatgggaaaattagaacacttgaattt
ccgtttgtgaaaggttcagctgaaatcacgagtctagtgctagcagaaaatagccctgga
agagatagtactgagtattttattgtgtttgagcctcggctgccagctttatcaagaacg
ttagaatcatatatcctaccatttatgttttacaatgatgttaagaagcagcaacaaatg
gcagcgcttacaaaagaaaaggaccaattatccaagtctattacagtgtacagaacttta
tttgataccagcaaacagcttcttgatgagatgaagtgccaagttgaagaagcaaaatta
aaagaggcccagttgcgaaatgaactgaaaaaccacaatattgacatttctacaacacag
cagataccacacattgaagcacttttgaaaagaaagctatcagaacaggaagaactaagg
aaaaaacccagaagatcatgtactcttccaaattatactaaaggcagtggagatgttttg
ggaaagattgcacacctggcacagattgaagatgatagagccgcaatggttatctcttgg
catctggcaagtgacatggactgtgtggtcaccctgaccactgatgctgcacgtcgaatt
tatgatgaaacccaaggtcgtcagcaggtgttgcccctcgattctatttataagaagact
cttccagattggaaaagacctctacctcattaccgaaatggaaaattgtattttaaaccc
attggagaccctgtctttgcccgagacttgttaacttttccagataacgtagaacactgt
gaaacagtatttggtatgctattaggagacactattattttggataatttggatgctgcc
aatcattacagaaaagaggttgttaaaattacacactgtcctacactgctaaccagagat
ggagatcgcattcgaagtaatgggaagtttgggggccttcagaataaagctcctccaatg
gataaactccggggaatggtgtttggagctccagtaccaaagcagtgcctgatcttaggg
gagcaaatagatcttcttcagcagtaccgcactgctgtgtgcaggttgggcagtgtgaac
gaggatcttaatgggcagctgaagtaccttcacactcccgatatgaagaggaagaaacaa
gaacttgatgaacacgaaaagaatcttaaactgatagagcaaaaactaggaatgactccc
acacataagtgtaatgattcattgcctcatccaatgacagacagtccagttcctcccaag
agattaagaagagaagctgcaagacaaaacaggattataaccaaaactgatgtgtga
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integrated database retrieval system
