Candidatus Melainabacteria bacterium MEL.A1: BHV42_07065
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Entry
BHV42_07065 CDS
T04546
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbf
Candidatus Melainabacteria bacterium MEL.A1
Pathway
mbf03030
DNA replication
mbf03410
Base excision repair
mbf03420
Nucleotide excision repair
mbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHV42_07065
03410 Base excision repair
BHV42_07065
03420 Nucleotide excision repair
BHV42_07065
03430 Mismatch repair
BHV42_07065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbf03032
]
BHV42_07065
03400 DNA repair and recombination proteins [BR:
mbf03400
]
BHV42_07065
Enzymes [BR:
mbf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BHV42_07065
DNA replication proteins [BR:
mbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BHV42_07065
DNA repair and recombination proteins [BR:
mbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BHV42_07065
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHV42_07065
MMR (mismatch excision repair)
DNA ligase
BHV42_07065
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BHV42_07065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
HHH
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH_3
Ribosomal_L10
Nlig-Ia
UPF0758_N
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AOR39431
LinkDB
All DBs
Position
complement(1444617..1446593)
Genome browser
AA seq
658 aa
AA seq
DB search
MVIDRINFLKDEINKANYKYYVEDNPSISDYEYDKMFAELKKLESENPLFVTPDSPTQRV
GSISEKFFPYKHKYRLYSLDNTYDYEDLELDWYKKIVKEYGEQELVCELKIDGLAMALTY
ENGIFVRGVTRGDGITGEDITNNLKTVKAIPLKLFEPVSVEVRGEVYMPKEAFEKLNKEN
LAKGEKLFANPRNAAAGSIRQLDSKITAQRDLSMFCYTAIFTGGVKDVPKTHFESLKYLK
KLGFKVNPNIRLCKNAKEAIEYCKEWDEKRFSLDYATDGVVIKVNDTLVQQEMGFTSRAP
KWATAFKFPPEEVTTKLLAIEESVGKTGAITPVAILEPVQLGGSTVARASLHNFDEVGRL
DVRIGDRVYIKKAAEIIPKVVKVIEDETHYNLPEYTPPEFCPSCHSKLTTHEDEVNLYCD
NPDCHAKRCAKIEYWVSKDAMDIDKIGPSIIEQLYTKGFAKTPVDLYKLTMQDFMQLDMV
KEKSAFNMYTAIQESKNRPLARLLTAFTIRNVGKETAGVLANEFETLENLQNASVEELSK
VEGVGEIIAQDIYNFFRKSETIQMLAELKELGIEPAPPAQNVSDKFKGQTFVLTGTLQNM
TRDEASEIIKQMGGKTSSSVSKNTSFVIAGEKAGSKLDKAEKLGVIILTEDDFLNMIK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggtaattgatagaataaattttttaaaagacgaaataaacaaagcaaattacaaatac
tatgtagaagataatccatccatcagcgattatgaatacgacaaaatgtttgcagaatta
aaaaaactggaaagcgaaaacccgcttttcgtaactccggatagcccaactcaaagagtt
ggttctattagcgaaaaattctttccatataagcacaagtaccgtttatatagcctcgac
aacacatacgattacgaggatttggaactcgattggtacaaaaaaatcgtaaaagaatat
ggagaacaagaactcgtatgtgagcttaaaatcgacggtctggcaatggctttgacgtac
gaaaacggaattttcgtacgtggagtaacgagaggtgacggaattacaggagaagatatt
acaaacaatctaaaaaccgtaaaagccattcctttaaagctttttgaacctgtaagcgta
gaagttcgtggcgaagtatatatgcccaaagaagcttttgaaaaattaaacaaagaaaat
ttagctaaaggcgaaaaactattcgcaaaccctcgtaacgctgcagcaggctctataaga
caacttgatagtaaaatcaccgcacaaagagatttgtcgatgttttgttataccgcaatt
tttacgggcggagttaaagatgtacccaaaacgcactttgaaagtcttaagtatctaaaa
aaactcggatttaaagtaaatccaaacatcagactttgcaaaaatgccaaagaagcaata
gaatactgcaaagaatgggatgaaaagcgtttcagccttgattatgcaacagacggagtt
gtgataaaagtaaatgacactcttgttcagcaagaaatgggctttacttctcgtgcgccc
aaatgggcaacagcattcaaatttccaccggaagaagttacaacaaaacttcttgcaatt
gaagaaagtgttggtaaaacaggtgcaatcactcctgttgcaatacttgaacctgttcaa
ttgggcggaagcactgtcgcaagagcgagtttacacaactttgacgaagtcggcagactg
gatgtaagaattggcgacagagtttatatcaaaaaagcagcagaaattattccgaaagtc
gtaaaagttattgaagatgaaacgcactacaatttaccggaatacactccaccggaattt
tgtccatcttgtcattcaaaattaactactcacgaagacgaggtaaatttatactgtgac
aaccccgattgccacgcaaaacgttgtgccaaaatagaatactgggtgtcaaaagatgcg
atggatattgacaaaatcgggccatcaataattgaacaactttatacgaaaggttttgca
aaaacacctgtcgatttgtacaaattaacaatgcaagattttatgcaacttgatatggta
aaagaaaagtctgcatttaacatgtacactgcaattcaagaaagcaaaaatagacccctt
gcaaggttattaaccgcctttacaataagaaatgtcggcaaagaaactgcaggtgtttta
gctaacgaatttgaaacccttgaaaatctgcaaaacgcctcagttgaagaattatccaaa
gtagaaggggttggagaaattatcgcacaagatatttacaatttctttagaaaatctgaa
acaattcaaatgcttgcagaactaaaagaattaggaattgaacccgctccacccgctcaa
aatgtttcagacaaattcaaaggacagacatttgttttaaccggaacattacaaaatatg
acgagagatgaagcatcagaaattattaaacaaatgggcggaaaaacctcatcatcagta
tcaaaaaacacttcttttgtaatcgccggagaaaaagccggttcaaaattagacaaagct
gaaaaattaggtgttataatattgacagaagatgattttctgaacatgataaagtaa
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