Mycoplasmopsis bovis Hubei-1: MMB_0481
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Entry
MMB_0481 CDS
T01568
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mbh
Mycoplasmopsis bovis Hubei-1
Pathway
mbh03030
DNA replication
mbh03410
Base excision repair
mbh03420
Nucleotide excision repair
mbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMB_0481 (ligA)
03410 Base excision repair
MMB_0481 (ligA)
03420 Nucleotide excision repair
MMB_0481 (ligA)
03430 Mismatch repair
MMB_0481 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbh03032
]
MMB_0481 (ligA)
03400 DNA repair and recombination proteins [BR:
mbh03400
]
MMB_0481 (ligA)
Enzymes [BR:
mbh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MMB_0481 (ligA)
DNA replication proteins [BR:
mbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMB_0481 (ligA)
DNA repair and recombination proteins [BR:
mbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MMB_0481 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMB_0481 (ligA)
MMR (mismatch excision repair)
DNA ligase
MMB_0481 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMB_0481 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
BRCT_2
Nlig-Ia
PTCB-BRCT
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEI90195
LinkDB
All DBs
Position
complement(586009..587973)
Genome browser
AA seq
654 aa
AA seq
DB search
MESKNAKELIKSLVHKINQWNYEYYQLNKPSVSDLEYDKALWELEKLEKEYPEFVLDDSP
TFKLGSFASEKFTKFIHKKPMLSLAKAYSYDDIKSFINNISKIIPAERINFNIEPKVDGL
SIALHYKKGKLVKAVTRGDGTEGEDVTENIYQIKSIPKLINYLNDLEVRGEVFISKDNFK
KINESNNFANARNAASGTLRQLDSTIVAKRNLSAFLYEVVEPEMHNINYQNEALEFMKKL
NIPTNPFSKVVEIEELEESISDFAEIKNKLDYDSDGLVIKLNDLQMWEKLGKTSKFPKHS
IAFKYDVEVASSTIVDILTSVGRTGKITYIANIHPVILNQTSVRAATLHNHNFIKDMNIN
INDEVNIIKAGEIIPKVISLKNSKNYVDYYKKATNCPSCNSELIEFEGIVDQFCTNDECP
EKNVNNIYHFASRNCMNIVGLGLSTVKDFYPKFIKKIKDIFSLYKYKSELILLPRYGEQK
VDNILNSIESVKNKAFSKVLFALGIKHIGQRAAKLIADNYVNFAEILDDSELSKLKSTKN
IGPKIIESLMEYINNPLNKDLLIYLDSIFNYEGKTKAISNIFSGYSFVITGTLSEPRSHF
VKIIEENSGSVSASVSSRTSYVLAGSEAGSKLEKAYKLGVKVINEEQFYKLLEH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaagaatgcaaaagaattgattaagtcattagttcataaaattaatcaatga
aattacgaatactaccaactaaataaacctagtgtttctgatctagaatatgataaagca
ctatgagaattggaaaaattagagaaagagtatcctgaatttgtacttgatgatagtcct
acatttaaattaggatcatttgcttctgaaaaattcactaaatttattcacaaaaagcca
atgctttctttagccaaagcctatagctatgatgatatcaaaagctttataaataatatt
tctaagattattcccgctgaaagaattaatttcaatattgagccaaaagttgatggttta
agtattgctttacactataaaaaaggcaaattagtaaaagcagttactagaggagatggc
accgaaggtgaagatgtaactgaaaatatatatcaaattaagtctatcccaaagcttatt
aattatttaaatgacctagaagtgcgtggagaagtatttatttcaaaagataattttaaa
aaaattaatgaaagtaataattttgctaatgctagaaatgcagcaagtggcactctaaga
cagctagattcaacaattgttgcaaaaagaaatttaagtgcatttttatatgaagttgtt
gaacctgaaatgcataatattaattatcaaaatgaagcattagagtttatgaaaaaatta
aatatcccaaccaaccctttttctaaagttgtcgagattgaagaattagaagaatctatt
agtgattttgcggaaataaaaaacaaattagactatgattcagatggattggtaatcaag
ctaaatgacttgcaaatgtgagagaaattaggtaaaacttcaaaattccctaagcattct
atagcatttaaatacgatgttgaagtagcttctagtaccattgttgatatattaacttca
gtaggtagaactggtaaaataacttatattgcaaatattcatcctgttatacttaaccaa
acctctgttagggctgcaacattacataatcataatttcatcaaggacatgaacattaat
ataaatgatgaagttaatataattaaagcaggtgaaataatacctaaagtaataagttta
aaaaattctaaaaattacgtagactactataaaaaagccactaactgcccttcatgtaat
tctgaattaattgagtttgaaggcattgttgatcagttttgcactaacgatgaatgtcca
gaaaaaaatgttaacaatatttaccattttgcttctagaaactgtatgaatatagtgggt
cttggtctaagtactgtcaaagacttttatcctaaatttataaaaaaaattaaagatata
tttagtttatataaatataaatcagaattaattttgcttcctagatatggagagcaaaaa
gttgataatattttaaacagtattgaaagtgtcaagaataaagcatttagcaaggttctc
tttgcactaggtataaagcacattgggcaaagagccgcaaaattaatagcagataattat
gttaattttgctgaaatattagatgattctgaactatcaaaacttaagagtactaaaaat
ataggtccaaaaataattgagagtttgatggagtacataaataatccattaaacaaagat
ttactaatttatttagattcaatttttaattatgaaggcaaaacaaaagccattagcaac
atttttagtggctattcttttgttataactggcacactttcagagccaagaagccatttt
gttaaaattattgaggaaaatagtggaagtgtttctgcttcagtatctagcagaactagt
tatgttcttgctggttctgaggctggaagtaagttagaaaaagcctataaattaggcgta
aaagtaatcaatgaagaacagttttataaacttttggagcattaa
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